RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 WASF1Q92558 559 aa13.19□□□□□ -0.3
VPS8-227ENST00000625842 ABCF2Q9UG63 623 aa13.19□□□□□ -0.3
VPS8-227ENST00000625842 FANCAO15360 1455 aa13.19□□□□□ -0.3
VPS8-227ENST00000625842 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
VPS8-227ENST00000625842 TXLNBQ8N3L3 684 aa13.18□□□□□ -0.3
VPS8-227ENST00000625842 HSP90AB2PQ58FF8 381 aa13.18□□□□□ -0.3
VPS8-227ENST00000625842 BICD2Q8TD16 824 aa13.18□□□□□ -0.3
VPS8-227ENST00000625842 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
VPS8-227ENST00000625842 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
VPS8-227ENST00000625842 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
VPS8-227ENST00000625842 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
VPS8-227ENST00000625842 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
VPS8-227ENST00000625842 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
VPS8-227ENST00000625842 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
VPS8-227ENST00000625842 MAGEC2Q9UBF1 373 aaPredicted RBP13.17□□□□□ -0.3
VPS8-227ENST00000625842 NOP2P46087 812 aaKnown RBP13.17□□□□□ -0.3
VPS8-227ENST00000625842 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
VPS8-227ENST00000625842 EIF6P56537 245 aaKnown RBP13.17□□□□□ -0.3
VPS8-227ENST00000625842 FCHSD2O94868 740 aa13.17□□□□□ -0.3
VPS8-227ENST00000625842 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
VPS8-227ENST00000625842 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
VPS8-227ENST00000625842 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
VPS8-227ENST00000625842 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
VPS8-227ENST00000625842 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
VPS8-227ENST00000625842 IL27Q8NEV9 243 aa13.16□□□□□ -0.3
VPS8-227ENST00000625842 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
VPS8-227ENST00000625842 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 HECW1Q76N89 1606 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 IBSPP21815 317 aaPredicted RBP13.15□□□□□ -0.3
VPS8-227ENST00000625842 KIF22Q14807 665 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 UHRF1BP1LA0JNW5 1464 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
VPS8-227ENST00000625842 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
VPS8-227ENST00000625842 KIF4AO95239 1232 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
VPS8-227ENST00000625842 TTC21BQ7Z4L5 1316 aa13.15□□□□□ -0.3
VPS8-227ENST00000625842 RAB34Q9BZG1 259 aa13.14□□□□□ -0.31
VPS8-227ENST00000625842 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
VPS8-227ENST00000625842 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
VPS8-227ENST00000625842 CCDC141Q6ZP82 1450 aa13.14□□□□□ -0.31
VPS8-227ENST00000625842 NAP1L1P55209 391 aaKnown RBP13.14□□□□□ -0.31
VPS8-227ENST00000625842 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
VPS8-227ENST00000625842 GPS2Q13227 327 aa13.14□□□□□ -0.31
VPS8-227ENST00000625842 CCDC152Q4G0S7 254 aa13.14□□□□□ -0.31
VPS8-227ENST00000625842 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
VPS8-227ENST00000625842 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
VPS8-227ENST00000625842 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPS8-227ENST00000625842 CCDC150Q8NCX0 1101 aa13.13□□□□□ -0.31
VPS8-227ENST00000625842 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
VPS8-227ENST00000625842 FILIP1LQ4L180 1135 aa13.13□□□□□ -0.31
VPS8-227ENST00000625842 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
VPS8-227ENST00000625842 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
VPS8-227ENST00000625842 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
VPS8-227ENST00000625842 TAF7Q15545 349 aaPredicted RBP13.13□□□□□ -0.31
VPS8-227ENST00000625842 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
VPS8-227ENST00000625842 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
VPS8-227ENST00000625842 HSPA2P54652 639 aa13.12□□□□□ -0.31
VPS8-227ENST00000625842 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
VPS8-227ENST00000625842 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
VPS8-227ENST00000625842 CCDC96Q2M329 555 aa13.12□□□□□ -0.31
VPS8-227ENST00000625842 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
VPS8-227ENST00000625842 NCBP1Q09161 790 aaKnown RBP13.12□□□□□ -0.31
VPS8-227ENST00000625842 KRT32Q14532 448 aa13.12□□□□□ -0.31
VPS8-227ENST00000625842 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
VPS8-227ENST00000625842 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
VPS8-227ENST00000625842 LPXNO60711 386 aa13.12□□□□□ -0.31
VPS8-227ENST00000625842 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
VPS8-227ENST00000625842 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 SMC2O95347 1197 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 MCM2P49736 904 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 PDIA4P13667 645 aaKnown RBP13.11□□□□□ -0.31
VPS8-227ENST00000625842 CETN2P41208 172 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
VPS8-227ENST00000625842 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
VPS8-227ENST00000625842 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
VPS8-227ENST00000625842 ZHX3Q9H4I2 956 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 TCP11L2Q8N4U5 519 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
VPS8-227ENST00000625842 KIF20AO95235 890 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 IL2RBP14784 551 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 TRAPPC3LQ5T215 181 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 ZRSR2Q15696 482 aaKnown RBP13.1□□□□□ -0.31
VPS8-227ENST00000625842 ZBTB24O43167 697 aaPredicted RBP13.1□□□□□ -0.31
VPS8-227ENST00000625842 TTF1Q15361 905 aaPredicted RBP13.1□□□□□ -0.31
VPS8-227ENST00000625842 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 LRSAM1Q6UWE0 723 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 NUP133Q8WUM0 1156 aa13.1□□□□□ -0.31
VPS8-227ENST00000625842 CA8P35219 290 aa13.09□□□□□ -0.31
VPS8-227ENST00000625842 CTCFLQ8NI51 663 aaPredicted RBP13.09□□□□□ -0.31
VPS8-227ENST00000625842 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
VPS8-227ENST00000625842 PLCG2P16885 1265 aa13.09□□□□□ -0.31
VPS8-227ENST00000625842 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms