RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 RAPGEF4Q8WZA2 1011 aa17.28■□□□□ 0.36
USP8-219ENST00000625664 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
USP8-219ENST00000625664 MORC1Q86VD1 984 aa17.27■□□□□ 0.35
USP8-219ENST00000625664 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.35
USP8-219ENST00000625664 NHSQ6T4R5 1651 aa17.27■□□□□ 0.35
USP8-219ENST00000625664 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
USP8-219ENST00000625664 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
USP8-219ENST00000625664 TATP17735 454 aaPredicted RBP17.25■□□□□ 0.35
USP8-219ENST00000625664 SHANK3Q9BYB0 1731 aa17.25■□□□□ 0.35
USP8-219ENST00000625664 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
USP8-219ENST00000625664 PROM2Q8N271 834 aa17.23■□□□□ 0.35
USP8-219ENST00000625664 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
USP8-219ENST00000625664 EYA1Q99502 592 aa17.23■□□□□ 0.35
USP8-219ENST00000625664 BTAF1O14981 1849 aa17.22■□□□□ 0.35
USP8-219ENST00000625664 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
USP8-219ENST00000625664 TXNRD1Q16881 649 aa17.22■□□□□ 0.35
USP8-219ENST00000625664 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
USP8-219ENST00000625664 NCAPD2Q15021 1401 aa17.21■□□□□ 0.35
USP8-219ENST00000625664 DOT1LQ8TEK3 1739 aa17.21■□□□□ 0.35
USP8-219ENST00000625664 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
USP8-219ENST00000625664 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
USP8-219ENST00000625664 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
USP8-219ENST00000625664 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
USP8-219ENST00000625664 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
USP8-219ENST00000625664 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
USP8-219ENST00000625664 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
USP8-219ENST00000625664 CYP27B1O15528 508 aa17.17■□□□□ 0.34
USP8-219ENST00000625664 LRP5O75197 1615 aa17.17■□□□□ 0.34
USP8-219ENST00000625664 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
USP8-219ENST00000625664 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
USP8-219ENST00000625664 STK32BQ9NY57 414 aa17.15■□□□□ 0.34
USP8-219ENST00000625664 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
USP8-219ENST00000625664 LRRC4BQ9NT99 713 aa17.12■□□□□ 0.33
USP8-219ENST00000625664 MTHFSP49914 203 aa17.11■□□□□ 0.33
USP8-219ENST00000625664 KCNQ4P56696 695 aa17.11■□□□□ 0.33
USP8-219ENST00000625664 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
USP8-219ENST00000625664 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
USP8-219ENST00000625664 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
USP8-219ENST00000625664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.334e-8■■■■■ 28.5
USP8-219ENST00000625664 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
USP8-219ENST00000625664 NPC1L1Q9UHC9 1359 aa17.1■□□□□ 0.33
USP8-219ENST00000625664 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
USP8-219ENST00000625664 IL13P35225 146 aa17.1■□□□□ 0.33
USP8-219ENST00000625664 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
USP8-219ENST00000625664 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
USP8-219ENST00000625664 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
USP8-219ENST00000625664 CASZ1Q86V15 1759 aa17.08■□□□□ 0.33
USP8-219ENST00000625664 PHKG2P15735 406 aa17.08■□□□□ 0.32
USP8-219ENST00000625664 ZNF827Q17R98 1081 aa17.08■□□□□ 0.32
USP8-219ENST00000625664 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.32
USP8-219ENST00000625664 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.32
USP8-219ENST00000625664 LY75O60449 1722 aa17.08■□□□□ 0.32
USP8-219ENST00000625664 ITGB4P16144 1822 aa17.07■□□□□ 0.32
USP8-219ENST00000625664 CCNL1Q9UK58 526 aaPredicted RBP17.07■□□□□ 0.32
USP8-219ENST00000625664 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
USP8-219ENST00000625664 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
USP8-219ENST00000625664 SPON1Q9HCB6 807 aa17.06■□□□□ 0.32
USP8-219ENST00000625664 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
USP8-219ENST00000625664 PIGBQ92521 554 aa17.05■□□□□ 0.32
USP8-219ENST00000625664 KDRP35968 1356 aa17.05■□□□□ 0.32
USP8-219ENST00000625664 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
USP8-219ENST00000625664 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
USP8-219ENST00000625664 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
USP8-219ENST00000625664 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
USP8-219ENST00000625664 HMOX1P09601 288 aa17.03■□□□□ 0.32
USP8-219ENST00000625664 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
USP8-219ENST00000625664 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
USP8-219ENST00000625664 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
USP8-219ENST00000625664 PPP1R1BQ9UD71 204 aaPredicted RBP17.02■□□□□ 0.32
USP8-219ENST00000625664 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.31
USP8-219ENST00000625664 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
USP8-219ENST00000625664 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
USP8-219ENST00000625664 C1orf141Q5JVX7 400 aa17.01■□□□□ 0.31
USP8-219ENST00000625664 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
USP8-219ENST00000625664 DCAF5Q96JK2 942 aa17■□□□□ 0.31
USP8-219ENST00000625664 ASAP1Q9ULH1 1129 aa17■□□□□ 0.31
USP8-219ENST00000625664 KDM6AO15550 1401 aaPredicted RBP17■□□□□ 0.31
USP8-219ENST00000625664 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
USP8-219ENST00000625664 U2SURPO15042 1029 aaKnown RBP16.99■□□□□ 0.31
USP8-219ENST00000625664 PNPLA7Q6ZV29 1317 aa16.99■□□□□ 0.31
USP8-219ENST00000625664 MTFR1LQ9H019 292 aa16.98■□□□□ 0.31
USP8-219ENST00000625664 C5P01031 1676 aa16.98■□□□□ 0.31
USP8-219ENST00000625664 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
USP8-219ENST00000625664 PTGER2P43116 358 aa16.98■□□□□ 0.31
USP8-219ENST00000625664 QSER1Q2KHR3 1735 aa16.98■□□□□ 0.31
USP8-219ENST00000625664 PPP2R1AP30153 589 aa16.97■□□□□ 0.31
USP8-219ENST00000625664 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
USP8-219ENST00000625664 TAF1LQ8IZX4 1826 aa16.97■□□□□ 0.31
USP8-219ENST00000625664 LOC102724428A0A0B4J2F2 783 aa16.96■□□□□ 0.31
USP8-219ENST00000625664 SIK1P57059 783 aa16.96■□□□□ 0.31
USP8-219ENST00000625664 CABP4P57796 275 aa16.96■□□□□ 0.31
USP8-219ENST00000625664 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
USP8-219ENST00000625664 MSH5O43196 834 aa16.94■□□□□ 0.3
USP8-219ENST00000625664 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
USP8-219ENST00000625664 MTHFSDQ2M296 383 aaKnown RBP16.94■□□□□ 0.3
USP8-219ENST00000625664 SGIP1Q9BQI5 828 aa16.94■□□□□ 0.3
USP8-219ENST00000625664 C4BP0C0L5 1744 aa16.93■□□□□ 0.3
USP8-219ENST00000625664 ATP6V1AP38606 617 aa16.93■□□□□ 0.3
USP8-219ENST00000625664 ITPK1Q13572 414 aa16.93■□□□□ 0.3
USP8-219ENST00000625664 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms