RNA–Protein interactions for RNA: ENST00000625023.1

AC002540.1-201, humanhuman

BASIC

Gene AC002540.1, Length 1,349 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002540.1-201ENST00000625023 INSRP06213 1382 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 CGNL1Q0VF96 1302 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 TRIM37O94972 964 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 PANK3Q9H999 370 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 NLRP2Q9NX02 1062 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 FLT4P35916 1363 aa11.72□□□□□ -0.53
AC002540.1-201ENST00000625023 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
AC002540.1-201ENST00000625023 IL2RBP14784 551 aa11.71□□□□□ -0.53
AC002540.1-201ENST00000625023 BAG6P46379 1132 aa11.71□□□□□ -0.53
AC002540.1-201ENST00000625023 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
AC002540.1-201ENST00000625023 HSP90AB2PQ58FF8 381 aa11.71□□□□□ -0.53
AC002540.1-201ENST00000625023 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.54
AC002540.1-201ENST00000625023 EXOC5O00471 708 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 AMPHP49418 695 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 NBPF6Q5VWK0 638 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 PTF1AQ7RTS3 328 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 NBPF4Q96M43 638 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 POLKQ9UBT6 870 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
AC002540.1-201ENST00000625023 WASHC2AQ641Q2 1341 aa11.69□□□□□ -0.54
AC002540.1-201ENST00000625023 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
AC002540.1-201ENST00000625023 PLSCR1O15162 318 aa11.69□□□□□ -0.54
AC002540.1-201ENST00000625023 EZH2Q15910 746 aaKnown RBP11.69□□□□□ -0.54
AC002540.1-201ENST00000625023 MEGF6O75095 1541 aa11.69□□□□□ -0.54
AC002540.1-201ENST00000625023 NSD2O96028 1365 aa11.69□□□□□ -0.54
AC002540.1-201ENST00000625023 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
AC002540.1-201ENST00000625023 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
AC002540.1-201ENST00000625023 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
AC002540.1-201ENST00000625023 BCL11BQ9C0K0 894 aaPredicted RBP11.68□□□□□ -0.54
AC002540.1-201ENST00000625023 APBA3O96018 575 aa11.67□□□□□ -0.54
AC002540.1-201ENST00000625023 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
AC002540.1-201ENST00000625023 PROM2Q8N271 834 aa11.66□□□□□ -0.54
AC002540.1-201ENST00000625023 LTV1Q96GA3 475 aaPredicted RBP11.66□□□□□ -0.54
AC002540.1-201ENST00000625023 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
AC002540.1-201ENST00000625023 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
AC002540.1-201ENST00000625023 KCNQ2O43526 872 aa11.64□□□□□ -0.55
AC002540.1-201ENST00000625023 PKD1L3Q7Z443 1732 aa11.64□□□□□ -0.55
AC002540.1-201ENST00000625023 BTAF1O14981 1849 aa11.64□□□□□ -0.55
AC002540.1-201ENST00000625023 PLEKHG2Q9H7P9 1386 aa11.63□□□□□ -0.55
AC002540.1-201ENST00000625023 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
AC002540.1-201ENST00000625023 USHBP1Q8N6Y0 703 aa11.62□□□□□ -0.55
AC002540.1-201ENST00000625023 EYA1Q99502 592 aa11.62□□□□□ -0.55
AC002540.1-201ENST00000625023 LRP5O75197 1615 aa11.62□□□□□ -0.55
AC002540.1-201ENST00000625023 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
AC002540.1-201ENST00000625023 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
AC002540.1-201ENST00000625023 ZCRB1Q8TBF4 217 aaKnown RBP11.61□□□□□ -0.55
AC002540.1-201ENST00000625023 KNSTRNQ9Y448 316 aa11.61□□□□□ -0.55
AC002540.1-201ENST00000625023 PAPPAQ13219 1627 aa11.61□□□□□ -0.55
AC002540.1-201ENST00000625023 IGSF1Q8N6C5 1336 aa11.61□□□□□ -0.55
AC002540.1-201ENST00000625023 DOT1LQ8TEK3 1739 aa11.61□□□□□ -0.55
AC002540.1-201ENST00000625023 CYP27B1O15528 508 aa11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 HAX1O00165 279 aa11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 TNNT2P45379 298 aaPredicted RBP11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 VASPP50552 380 aaPredicted RBP11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 MORC1Q86VD1 984 aa11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 ACSBG1Q96GR2 724 aa11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
AC002540.1-201ENST00000625023 TOGARAM1Q9Y4F4 1720 aa11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 LY75O60449 1722 aa11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 R3HDM1Q15032 1099 aaKnown RBP11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 TXNRD1Q16881 649 aa11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 DDX54Q8TDD1 881 aaKnown RBP11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 ANO8Q9HCE9 1232 aaPredicted RBP11.59□□□□□ -0.55
AC002540.1-201ENST00000625023 KDRP35968 1356 aa11.58□□□□□ -0.56
AC002540.1-201ENST00000625023 CASZ1Q86V15 1759 aa11.58□□□□□ -0.56
AC002540.1-201ENST00000625023 TATP17735 454 aaPredicted RBP11.58□□□□□ -0.56
AC002540.1-201ENST00000625023 ITGB4P16144 1822 aa11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 IL13P35225 146 aa11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 LRRC4BQ9NT99 713 aa11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 PCDH11XQ9BZA7 1347 aa11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 PCDH11YQ9BZA8 1340 aa11.57□□□□□ -0.56
AC002540.1-201ENST00000625023 COL3A1P02461 1466 aaPredicted RBP11.56□□□□□ -0.56
AC002540.1-201ENST00000625023 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
AC002540.1-201ENST00000625023 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
AC002540.1-201ENST00000625023 MTHFSP49914 203 aa11.54□□□□□ -0.56
AC002540.1-201ENST00000625023 NBPF14Q5TI25 921 aa11.54□□□□□ -0.56
AC002540.1-201ENST00000625023 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
AC002540.1-201ENST00000625023 PHKG2P15735 406 aa11.53□□□□□ -0.56
AC002540.1-201ENST00000625023 CC2D1BQ5T0F9 858 aaKnown RBP11.53□□□□□ -0.56
AC002540.1-201ENST00000625023 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
AC002540.1-201ENST00000625023 SLC15A2Q16348 729 aa11.52□□□□□ -0.57
AC002540.1-201ENST00000625023 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
AC002540.1-201ENST00000625023 PDGFDQ9GZP0 370 aaPredicted RBP11.52□□□□□ -0.57
AC002540.1-201ENST00000625023 SPG7Q9UQ90 795 aa11.52□□□□□ -0.57
AC002540.1-201ENST00000625023 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
AC002540.1-201ENST00000625023 TUBGCP6Q96RT7 1819 aa11.51□□□□□ -0.57
AC002540.1-201ENST00000625023 ZNF827Q17R98 1081 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms