RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 EXOC5O00471 708 aa23.35■■□□□ 1.33
SLC6A6-209ENST00000622176 HMOX1P09601 288 aa23.35■■□□□ 1.33
SLC6A6-209ENST00000622176 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
SLC6A6-209ENST00000622176 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
SLC6A6-209ENST00000622176 CCDC184Q52MB2 194 aa23.35■■□□□ 1.33
SLC6A6-209ENST00000622176 TNS2Q63HR2 1409 aa23.33■■□□□ 1.33
SLC6A6-209ENST00000622176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.33■■□□□ 1.33
SLC6A6-209ENST00000622176 LRRC37A3O60309 1634 aa23.33■■□□□ 1.32
SLC6A6-209ENST00000622176 KRT27Q7Z3Y8 459 aa23.32■■□□□ 1.32
SLC6A6-209ENST00000622176 ZCRB1Q8TBF4 217 aaKnown RBP23.32■■□□□ 1.32
SLC6A6-209ENST00000622176 FCHSD2O94868 740 aa23.31■■□□□ 1.32
SLC6A6-209ENST00000622176 PDE3BQ13370 1112 aa23.31■■□□□ 1.32
SLC6A6-209ENST00000622176 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
SLC6A6-209ENST00000622176 MRS2Q9HD23 443 aa23.31■■□□□ 1.32
SLC6A6-209ENST00000622176 SPG7Q9UQ90 795 aa23.29■■□□□ 1.32
SLC6A6-209ENST00000622176 AMOTQ4VCS5 1084 aa23.28■■□□□ 1.32
SLC6A6-209ENST00000622176 PLEKHO1Q53GL0 409 aaPredicted RBP23.28■■□□□ 1.32
SLC6A6-209ENST00000622176 WDR43Q15061 677 aaKnown RBP eCLIP23.27■■□□□ 1.32
SLC6A6-209ENST00000622176 MARCH10Q8NA82 808 aaPredicted RBP23.27■■□□□ 1.32
SLC6A6-209ENST00000622176 PKD1L3Q7Z443 1732 aa23.26■■□□□ 1.31
SLC6A6-209ENST00000622176 CCER2I3L3R5 266 aa23.26■■□□□ 1.31
SLC6A6-209ENST00000622176 PRKAR2BP31323 418 aa23.26■■□□□ 1.31
SLC6A6-209ENST00000622176 MIER1Q8N108 512 aa23.26■■□□□ 1.31
SLC6A6-209ENST00000622176 PNISRQ8TF01 805 aaKnown RBP23.26■■□□□ 1.31
SLC6A6-209ENST00000622176 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
SLC6A6-209ENST00000622176 ADAMTS8Q9UP79 889 aa23.25■■□□□ 1.31
SLC6A6-209ENST00000622176 PCDH11XQ9BZA7 1347 aa23.25■■□□□ 1.31
SLC6A6-209ENST00000622176 PCDH11YQ9BZA8 1340 aa23.25■■□□□ 1.31
SLC6A6-209ENST00000622176 CYP27B1O15528 508 aa23.24■■□□□ 1.31
SLC6A6-209ENST00000622176 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
SLC6A6-209ENST00000622176 SHANK3Q9BYB0 1731 aa23.23■■□□□ 1.31
SLC6A6-209ENST00000622176 PLEKHF1Q96S99 279 aa23.23■■□□□ 1.31
SLC6A6-209ENST00000622176 BCL9O00512 1426 aa23.23■■□□□ 1.31
SLC6A6-209ENST00000622176 FAM182BQ5T319 152 aa23.22■■□□□ 1.31
SLC6A6-209ENST00000622176 PHACTR3Q96KR7 559 aa23.22■■□□□ 1.31
SLC6A6-209ENST00000622176 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
SLC6A6-209ENST00000622176 FAM196AQ6ZSG2 479 aa23.21■■□□□ 1.31
SLC6A6-209ENST00000622176 PHKG2P15735 406 aa23.2■■□□□ 1.3
SLC6A6-209ENST00000622176 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
SLC6A6-209ENST00000622176 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
SLC6A6-209ENST00000622176 NKX1-1Q15270 411 aaPredicted RBP23.19■■□□□ 1.3
SLC6A6-209ENST00000622176 GAS2L2Q8NHY3 880 aa23.19■■□□□ 1.3
SLC6A6-209ENST00000622176 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
SLC6A6-209ENST00000622176 NEFMP07197 916 aa23.17■■□□□ 1.3
SLC6A6-209ENST00000622176 CCDC125Q86Z20 511 aa23.17■■□□□ 1.3
SLC6A6-209ENST00000622176 AKAP4Q5JQC9 854 aa23.16■■□□□ 1.3
SLC6A6-209ENST00000622176 C1orf141Q5JVX7 400 aa23.16■■□□□ 1.3
SLC6A6-209ENST00000622176 MAPK8IP3Q9UPT6 1336 aa23.15■■□□□ 1.3
SLC6A6-209ENST00000622176 HSP90AB1P08238 724 aaKnown RBP23.15■■□□□ 1.3
SLC6A6-209ENST00000622176 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
SLC6A6-209ENST00000622176 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
SLC6A6-209ENST00000622176 DCAF5Q96JK2 942 aa23.12■■□□□ 1.29
SLC6A6-209ENST00000622176 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
SLC6A6-209ENST00000622176 MAP3K5Q99683 1374 aa23.11■■□□□ 1.29
SLC6A6-209ENST00000622176 GNAT3A8MTJ3 354 aa23.1■■□□□ 1.29
SLC6A6-209ENST00000622176 FAM9BQ8IZU0 186 aa23.1■■□□□ 1.29
SLC6A6-209ENST00000622176 KDM6AO15550 1401 aaPredicted RBP23.09■■□□□ 1.29
SLC6A6-209ENST00000622176 MPRIPQ6WCQ1 1025 aa23.09■■□□□ 1.29
SLC6A6-209ENST00000622176 HTATSF1O43719 755 aaKnown RBP23.08■■□□□ 1.29
SLC6A6-209ENST00000622176 TRIM37O94972 964 aa23.08■■□□□ 1.29
SLC6A6-209ENST00000622176 TMPOP42166 694 aaKnown RBP23.08■■□□□ 1.29
SLC6A6-209ENST00000622176 PRIM1P49642 420 aaKnown RBP23.08■■□□□ 1.29
SLC6A6-209ENST00000622176 ACSBG1Q96GR2 724 aa23.08■■□□□ 1.29
SLC6A6-209ENST00000622176 BCL11BQ9C0K0 894 aaPredicted RBP23.08■■□□□ 1.29
SLC6A6-209ENST00000622176 ERVV-2B6SEH9 535 aa23.07■■□□□ 1.28
SLC6A6-209ENST00000622176 KCNQ2O43526 872 aa23.07■■□□□ 1.28
SLC6A6-209ENST00000622176 SF3B2Q13435 895 aaKnown RBP23.07■■□□□ 1.28
SLC6A6-209ENST00000622176 SBF2Q86WG5 1849 aa23.07■■□□□ 1.28
SLC6A6-209ENST00000622176 TNS1Q9HBL0 1735 aaKnown RBP23.07■■□□□ 1.28
SLC6A6-209ENST00000622176 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
SLC6A6-209ENST00000622176 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
SLC6A6-209ENST00000622176 LGR6Q9HBX8 967 aa23.06■■□□□ 1.28
SLC6A6-209ENST00000622176 APAF1O14727 1248 aa23.05■■□□□ 1.28
SLC6A6-209ENST00000622176 PTF1AQ7RTS3 328 aa23.05■■□□□ 1.28
SLC6A6-209ENST00000622176 KAT6BQ8WYB5 2073 aa23.05■■□□□ 1.28
SLC6A6-209ENST00000622176 DOT1LQ8TEK3 1739 aa23.05■■□□□ 1.28
SLC6A6-209ENST00000622176 TOGARAM1Q9Y4F4 1720 aa23.05■■□□□ 1.28
SLC6A6-209ENST00000622176 NHSQ6T4R5 1651 aa23.04■■□□□ 1.28
SLC6A6-209ENST00000622176 ADAMTS7Q9UKP4 1686 aa23.04■■□□□ 1.28
SLC6A6-209ENST00000622176 RIPK4P57078 832 aa23.04■■□□□ 1.28
SLC6A6-209ENST00000622176 RTF1Q92541 710 aaKnown RBP23.04■■□□□ 1.28
SLC6A6-209ENST00000622176 SYTL4Q96C24 671 aaPredicted RBP23.03■■□□□ 1.28
SLC6A6-209ENST00000622176 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
SLC6A6-209ENST00000622176 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
SLC6A6-209ENST00000622176 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
SLC6A6-209ENST00000622176 SCN11AQ9UI33 1791 aa23.01■■□□□ 1.27
SLC6A6-209ENST00000622176 CABP4P57796 275 aa23.01■■□□□ 1.27
SLC6A6-209ENST00000622176 PIGBQ92521 554 aa23.01■■□□□ 1.27
SLC6A6-209ENST00000622176 TMOD3Q9NYL9 352 aa23.01■■□□□ 1.27
SLC6A6-209ENST00000622176 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
SLC6A6-209ENST00000622176 MCM10Q7L590 875 aa23■■□□□ 1.27
SLC6A6-209ENST00000622176 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
SLC6A6-209ENST00000622176 MRC1P22897 1456 aa22.99■■□□□ 1.27
SLC6A6-209ENST00000622176 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
SLC6A6-209ENST00000622176 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
SLC6A6-209ENST00000622176 NCBP3Q53F19 620 aaKnown RBP22.99■■□□□ 1.27
SLC6A6-209ENST00000622176 NFATC2IPQ8NCF5 419 aa22.99■■□□□ 1.27
SLC6A6-209ENST00000622176 DLG5Q8TDM6 1919 aa22.99■■□□□ 1.27
SLC6A6-209ENST00000622176 APBA3O96018 575 aa22.98■■□□□ 1.27
SLC6A6-209ENST00000622176 TRIM35Q9UPQ4 493 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms