RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ZCRB1Q8TBF4 217 aaKnown RBP24.71■■□□□ 1.55
SCAMP4-213ENST00000621748 SHANK3Q9BYB0 1731 aa24.7■■□□□ 1.54
SCAMP4-213ENST00000621748 TNNT2P45379 298 aaPredicted RBP24.7■■□□□ 1.54
SCAMP4-213ENST00000621748 LRP5O75197 1615 aa24.7■■□□□ 1.54
SCAMP4-213ENST00000621748 KIF7Q2M1P5 1343 aa24.69■■□□□ 1.54
SCAMP4-213ENST00000621748 WASHC2AQ641Q2 1341 aa24.69■■□□□ 1.54
SCAMP4-213ENST00000621748 TXNRD1Q16881 649 aa24.68■■□□□ 1.54
SCAMP4-213ENST00000621748 RAPGEF4Q8WZA2 1011 aa24.68■■□□□ 1.54
SCAMP4-213ENST00000621748 BTAF1O14981 1849 aa24.68■■□□□ 1.54
SCAMP4-213ENST00000621748 ANO8Q9HCE9 1232 aaPredicted RBP24.67■■□□□ 1.54
SCAMP4-213ENST00000621748 TATP17735 454 aaPredicted RBP24.65■■□□□ 1.54
SCAMP4-213ENST00000621748 NSD2O96028 1365 aa24.64■■□□□ 1.53
SCAMP4-213ENST00000621748 KNSTRNQ9Y448 316 aa24.63■■□□□ 1.53
SCAMP4-213ENST00000621748 PRIM1P49642 420 aaKnown RBP24.62■■□□□ 1.53
SCAMP4-213ENST00000621748 EYA1Q99502 592 aa24.62■■□□□ 1.53
SCAMP4-213ENST00000621748 NCAPD2Q15021 1401 aa24.61■■□□□ 1.53
SCAMP4-213ENST00000621748 DOT1LQ8TEK3 1739 aa24.61■■□□□ 1.53
SCAMP4-213ENST00000621748 MORC1Q86VD1 984 aa24.6■■□□□ 1.53
SCAMP4-213ENST00000621748 SYTL4Q96C24 671 aaPredicted RBP24.6■■□□□ 1.53
SCAMP4-213ENST00000621748 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-213ENST00000621748 EIF4A2Q14240 407 aaKnown RBP24.59■■□□□ 1.53
SCAMP4-213ENST00000621748 AMER1Q5JTC6 1135 aaPredicted RBP24.58■■□□□ 1.53
SCAMP4-213ENST00000621748 CYP27B1O15528 508 aa24.57■■□□□ 1.52
SCAMP4-213ENST00000621748 PDGFDQ9GZP0 370 aaPredicted RBP24.57■■□□□ 1.52
SCAMP4-213ENST00000621748 PCDH11XQ9BZA7 1347 aa24.57■■□□□ 1.52
SCAMP4-213ENST00000621748 PCDH11YQ9BZA8 1340 aa24.57■■□□□ 1.52
SCAMP4-213ENST00000621748 LRRC4BQ9NT99 713 aa24.56■■□□□ 1.52
SCAMP4-213ENST00000621748 STK32BQ9NY57 414 aa24.56■■□□□ 1.52
SCAMP4-213ENST00000621748 PER1O15534 1290 aaPredicted RBP24.55■■□□□ 1.52
SCAMP4-213ENST00000621748 SLC15A2Q16348 729 aa24.55■■□□□ 1.52
SCAMP4-213ENST00000621748 PKD1L3Q7Z443 1732 aa24.55■■□□□ 1.52
SCAMP4-213ENST00000621748 CASZ1Q86V15 1759 aa24.54■■□□□ 1.52
SCAMP4-213ENST00000621748 PAPPAQ13219 1627 aa24.52■■□□□ 1.52
SCAMP4-213ENST00000621748 SPON1Q9HCB6 807 aa24.51■■□□□ 1.51
SCAMP4-213ENST00000621748 KCNQ4P56696 695 aa24.5■■□□□ 1.51
SCAMP4-213ENST00000621748 SLC27A3Q5K4L6 730 aa24.5■■□□□ 1.51
SCAMP4-213ENST00000621748 SPG7Q9UQ90 795 aa24.5■■□□□ 1.51
SCAMP4-213ENST00000621748 IGSF1Q8N6C5 1336 aa24.5■■□□□ 1.51
SCAMP4-213ENST00000621748 LY75O60449 1722 aa24.49■■□□□ 1.51
SCAMP4-213ENST00000621748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.49■■□□□ 1.51
SCAMP4-213ENST00000621748 NKX1-1Q15270 411 aaPredicted RBP24.48■■□□□ 1.51
SCAMP4-213ENST00000621748 ZNF827Q17R98 1081 aa24.48■■□□□ 1.51
SCAMP4-213ENST00000621748 TOGARAM1Q9Y4F4 1720 aa24.48■■□□□ 1.51
SCAMP4-213ENST00000621748 ZBTB7AO95365 584 aa24.47■■□□□ 1.51
SCAMP4-213ENST00000621748 ITGB4P16144 1822 aa24.47■■□□□ 1.51
SCAMP4-213ENST00000621748 CC2D1BQ5T0F9 858 aaKnown RBP24.46■■□□□ 1.51
SCAMP4-213ENST00000621748 MPRIPQ6WCQ1 1025 aa24.46■■□□□ 1.51
SCAMP4-213ENST00000621748 AKT1S1Q96B36 256 aa24.45■■□□□ 1.5
SCAMP4-213ENST00000621748 PHKG2P15735 406 aa24.43■■□□□ 1.5
SCAMP4-213ENST00000621748 IFNL2Q8IZJ0 200 aa24.43■■□□□ 1.5
SCAMP4-213ENST00000621748 CCNL1Q9UK58 526 aaPredicted RBP24.43■■□□□ 1.5
SCAMP4-213ENST00000621748 ATF5Q9Y2D1 282 aaPredicted RBP24.43■■□□□ 1.5
SCAMP4-213ENST00000621748 IL13P35225 146 aa24.42■■□□□ 1.5
SCAMP4-213ENST00000621748 MTHFSP49914 203 aa24.42■■□□□ 1.5
SCAMP4-213ENST00000621748 AEBP1Q8IUX7 1158 aa24.42■■□□□ 1.5
SCAMP4-213ENST00000621748 PIGBQ92521 554 aa24.41■■□□□ 1.5
SCAMP4-213ENST00000621748 PPP1R1BQ9UD71 204 aaPredicted RBP24.41■■□□□ 1.5
SCAMP4-213ENST00000621748 PTGER2P43116 358 aa24.4■■□□□ 1.5
SCAMP4-213ENST00000621748 CNGB1Q14028 1251 aaPredicted RBP24.4■■□□□ 1.5
SCAMP4-213ENST00000621748 PLEKHG2Q9H7P9 1386 aa24.4■■□□□ 1.5
SCAMP4-213ENST00000621748 PALLDQ8WX93 1383 aa24.39■■□□□ 1.49
SCAMP4-213ENST00000621748 NPC1L1Q9UHC9 1359 aa24.39■■□□□ 1.49
SCAMP4-213ENST00000621748 PLEKHO1Q53GL0 409 aaPredicted RBP24.38■■□□□ 1.49
SCAMP4-213ENST00000621748 SULT6B1Q6IMI4 303 aa24.38■■□□□ 1.49
SCAMP4-213ENST00000621748 MTFR1LQ9H019 292 aa24.38■■□□□ 1.49
SCAMP4-213ENST00000621748 TUBGCP6Q96RT7 1819 aa24.38■■□□□ 1.49
SCAMP4-213ENST00000621748 QSER1Q2KHR3 1735 aa24.37■■□□□ 1.49
SCAMP4-213ENST00000621748 PNPLA7Q6ZV29 1317 aa24.36■■□□□ 1.49
SCAMP4-213ENST00000621748 TFCP2L1Q9NZI6 479 aa24.36■■□□□ 1.49
SCAMP4-213ENST00000621748 KDRP35968 1356 aa24.35■■□□□ 1.49
SCAMP4-213ENST00000621748 SMARCC1Q92922 1105 aaPredicted RBP24.35■■□□□ 1.49
SCAMP4-213ENST00000621748 SGIP1Q9BQI5 828 aa24.35■■□□□ 1.49
SCAMP4-213ENST00000621748 TMOD3Q9NYL9 352 aa24.35■■□□□ 1.49
SCAMP4-213ENST00000621748 AMOTQ4VCS5 1084 aa24.34■■□□□ 1.49
SCAMP4-213ENST00000621748 ZNF530Q6P9A1 599 aaPredicted RBP24.34■■□□□ 1.49
SCAMP4-213ENST00000621748 TAF1LQ8IZX4 1826 aa24.33■■□□□ 1.49
SCAMP4-213ENST00000621748 C5P01031 1676 aa24.32■■□□□ 1.48
SCAMP4-213ENST00000621748 ASAP1Q9ULH1 1129 aa24.32■■□□□ 1.48
SCAMP4-213ENST00000621748 HSP90AB1P08238 724 aaKnown RBP24.3■■□□□ 1.48
SCAMP4-213ENST00000621748 DCAF5Q96JK2 942 aa24.3■■□□□ 1.48
SCAMP4-213ENST00000621748 KDM6AO15550 1401 aaPredicted RBP24.29■■□□□ 1.48
SCAMP4-213ENST00000621748 ERVV-2B6SEH9 535 aa24.29■■□□□ 1.48
SCAMP4-213ENST00000621748 DIAPH1O60610 1272 aaKnown RBP24.29■■□□□ 1.48
SCAMP4-213ENST00000621748 HMOX1P09601 288 aa24.29■■□□□ 1.48
SCAMP4-213ENST00000621748 SLC16A10Q8TF71 515 aa24.29■■□□□ 1.48
SCAMP4-213ENST00000621748 ATG3Q9NT62 314 aa24.29■■□□□ 1.48
SCAMP4-213ENST00000621748 LOC102724428A0A0B4J2F2 783 aa24.28■■□□□ 1.48
SCAMP4-213ENST00000621748 SIK1P57059 783 aa24.28■■□□□ 1.48
SCAMP4-213ENST00000621748 C1orf141Q5JVX7 400 aa24.27■■□□□ 1.48
SCAMP4-213ENST00000621748 COL23A1Q86Y22 540 aaPredicted RBP24.27■■□□□ 1.48
SCAMP4-213ENST00000621748 COL3A1P02461 1466 aaPredicted RBP24.26■■□□□ 1.47
SCAMP4-213ENST00000621748 C4BP0C0L5 1744 aa24.25■■□□□ 1.47
SCAMP4-213ENST00000621748 ARXQ96QS3 562 aa24.25■■□□□ 1.47
SCAMP4-213ENST00000621748 FHDC1Q9C0D6 1143 aaPredicted RBP24.25■■□□□ 1.47
SCAMP4-213ENST00000621748 COL24A1Q17RW2 1714 aa24.24■■□□□ 1.47
SCAMP4-213ENST00000621748 HMGB2P26583 209 aaKnown RBP24.24■■□□□ 1.47
SCAMP4-213ENST00000621748 MSH5O43196 834 aa24.23■■□□□ 1.47
SCAMP4-213ENST00000621748 CABP4P57796 275 aa24.23■■□□□ 1.47
SCAMP4-213ENST00000621748 ITPK1Q13572 414 aa24.23■■□□□ 1.47
SCAMP4-213ENST00000621748 LINC00116Q8NCU8 138 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms