RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 RCAN3Q9UKA8 241 aa24.24■■□□□ 1.47
SEMA6C-210ENST00000621728 IL16Q14005 1332 aa24.24■■□□□ 1.47
SEMA6C-210ENST00000621728 FANCIQ9NVI1 1328 aa24.24■■□□□ 1.47
SEMA6C-210ENST00000621728 HSPA1LP34931 641 aa24.23■■□□□ 1.47
SEMA6C-210ENST00000621728 EVA1CP58658 441 aa24.23■■□□□ 1.47
SEMA6C-210ENST00000621728 JCADQ9P266 1359 aa24.22■■□□□ 1.47
SEMA6C-210ENST00000621728 MYH16Q9H6N6 1097 aa24.22■■□□□ 1.47
SEMA6C-210ENST00000621728 MAP3K5Q99683 1374 aa24.22■■□□□ 1.47
SEMA6C-210ENST00000621728 IRX6P78412 446 aaPredicted RBP24.22■■□□□ 1.47
SEMA6C-210ENST00000621728 RAPGEF4Q8WZA2 1011 aa24.22■■□□□ 1.47
SEMA6C-210ENST00000621728 PLEKHO1Q53GL0 409 aaPredicted RBP24.21■■□□□ 1.47
SEMA6C-210ENST00000621728 ZNF530Q6P9A1 599 aaPredicted RBP24.21■■□□□ 1.47
SEMA6C-210ENST00000621728 GNAT3A8MTJ3 354 aa24.2■■□□□ 1.46
SEMA6C-210ENST00000621728 RTF1Q92541 710 aaKnown RBP24.2■■□□□ 1.46
SEMA6C-210ENST00000621728 TATP17735 454 aaPredicted RBP24.19■■□□□ 1.46
SEMA6C-210ENST00000621728 USP35Q9P2H5 1018 aa24.18■■□□□ 1.46
SEMA6C-210ENST00000621728 LRRC37A3O60309 1634 aa24.18■■□□□ 1.46
SEMA6C-210ENST00000621728 CRB1P82279 1406 aa24.18■■□□□ 1.46
SEMA6C-210ENST00000621728 ZNF853P0CG23 659 aa24.18■■□□□ 1.46
SEMA6C-210ENST00000621728 IL17REQ8NFR9 667 aa24.18■■□□□ 1.46
SEMA6C-210ENST00000621728 CARD10Q9BWT7 1032 aa24.18■■□□□ 1.46
SEMA6C-210ENST00000621728 NRAPQ86VF7 1730 aa24.17■■□□□ 1.46
SEMA6C-210ENST00000621728 CALD1Q05682 793 aaKnown RBP24.17■■□□□ 1.46
SEMA6C-210ENST00000621728 EXOSC9Q06265 439 aaKnown RBP24.17■■□□□ 1.46
SEMA6C-210ENST00000621728 AMOTQ4VCS5 1084 aa24.17■■□□□ 1.46
SEMA6C-210ENST00000621728 IFT57Q9NWB7 429 aa24.17■■□□□ 1.46
SEMA6C-210ENST00000621728 VIRMAQ69YN4 1812 aaKnown RBP24.17■■□□□ 1.46
SEMA6C-210ENST00000621728 NEFLP07196 543 aa24.16■■□□□ 1.46
SEMA6C-210ENST00000621728 MBIPQ9NS73 344 aa24.16■■□□□ 1.46
SEMA6C-210ENST00000621728 LRP6O75581 1613 aa24.15■■□□□ 1.46
SEMA6C-210ENST00000621728 PKD1L3Q7Z443 1732 aa24.15■■□□□ 1.46
SEMA6C-210ENST00000621728 PARP4Q9UKK3 1724 aaKnown RBP24.15■■□□□ 1.46
SEMA6C-210ENST00000621728 GNAI1P63096 354 aa24.15■■□□□ 1.46
SEMA6C-210ENST00000621728 FKBP8Q14318 412 aa24.15■■□□□ 1.46
SEMA6C-210ENST00000621728 LGR6Q9HBX8 967 aa24.15■■□□□ 1.46
SEMA6C-210ENST00000621728 RNF123Q5XPI4 1314 aa24.14■■□□□ 1.46
SEMA6C-210ENST00000621728 CFAP44Q96MT7 982 aa24.14■■□□□ 1.46
SEMA6C-210ENST00000621728 MIS18AQ9NYP9 233 aa24.14■■□□□ 1.46
SEMA6C-210ENST00000621728 HTATSF1O43719 755 aaKnown RBP24.14■■□□□ 1.45
SEMA6C-210ENST00000621728 AKAP4Q5JQC9 854 aa24.14■■□□□ 1.45
SEMA6C-210ENST00000621728 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
SEMA6C-210ENST00000621728 OVOS2A0A0G2JMS6 1433 aa24.13■■□□□ 1.45
SEMA6C-210ENST00000621728 C1orf141Q5JVX7 400 aa24.12■■□□□ 1.45
SEMA6C-210ENST00000621728 C8orf37Q96NL8 207 aa24.11■■□□□ 1.45
SEMA6C-210ENST00000621728 SLIT2O94813 1529 aa24.11■■□□□ 1.45
SEMA6C-210ENST00000621728 PLIN1O60240 522 aa24.1■■□□□ 1.45
SEMA6C-210ENST00000621728 BCAR3O75815 825 aa24.1■■□□□ 1.45
SEMA6C-210ENST00000621728 RRP1P56182 461 aaKnown RBP24.1■■□□□ 1.45
SEMA6C-210ENST00000621728 SPG7Q9UQ90 795 aa24.1■■□□□ 1.45
SEMA6C-210ENST00000621728 NWD2Q9ULI1 1742 aa24.1■■□□□ 1.45
SEMA6C-210ENST00000621728 CHL1O00533 1208 aa24.1■■□□□ 1.45
SEMA6C-210ENST00000621728 IL2RBP14784 551 aa24.1■■□□□ 1.45
SEMA6C-210ENST00000621728 SHANK3Q9BYB0 1731 aa24.09■■□□□ 1.45
SEMA6C-210ENST00000621728 CEMIPQ8WUJ3 1361 aa24.09■■□□□ 1.45
SEMA6C-210ENST00000621728 SPATA31A6Q5VVP1 1343 aa24.09■■□□□ 1.45
SEMA6C-210ENST00000621728 CYP27B1O15528 508 aa24.08■■□□□ 1.45
SEMA6C-210ENST00000621728 TSPYL6Q8N831 410 aa24.08■■□□□ 1.45
SEMA6C-210ENST00000621728 PHKG2P15735 406 aa24.08■■□□□ 1.44
SEMA6C-210ENST00000621728 KRT24Q2M2I5 525 aa24.08■■□□□ 1.44
SEMA6C-210ENST00000621728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.08■■□□□ 1.441e-6■■■□□ 16.7
SEMA6C-210ENST00000621728 RNMTO43148 476 aaKnown RBP24.07■■□□□ 1.44
SEMA6C-210ENST00000621728 BCL2L13Q9BXK5 485 aa24.07■■□□□ 1.44
SEMA6C-210ENST00000621728 ADAMTS7Q9UKP4 1686 aa24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 ELL2O00472 640 aaPredicted RBP24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 KDM6AO15550 1401 aaPredicted RBP24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 WNK3Q9BYP7 1800 aa24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 RARSP54136 660 aaKnown RBP24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 ZCRB1Q8TBF4 217 aaKnown RBP24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 NGLY1Q96IV0 654 aa24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 TSPYL4Q9UJ04 414 aa24.06■■□□□ 1.44
SEMA6C-210ENST00000621728 SCN11AQ9UI33 1791 aa24.05■■□□□ 1.44
SEMA6C-210ENST00000621728 DISP2A7MBM2 1401 aa24.04■■□□□ 1.44
SEMA6C-210ENST00000621728 IFNL2Q8IZJ0 200 aa24.04■■□□□ 1.44
SEMA6C-210ENST00000621728 PLEKHG2Q9H7P9 1386 aa24.03■■□□□ 1.44
SEMA6C-210ENST00000621728 TAF7Q15545 349 aaPredicted RBP24.03■■□□□ 1.44
SEMA6C-210ENST00000621728 BCL9LQ86UU0 1499 aa24.02■■□□□ 1.44
SEMA6C-210ENST00000621728 SPATA31A1Q5TZJ5 1347 aa24.02■■□□□ 1.44
SEMA6C-210ENST00000621728 SIPA1L3O60292 1781 aaPredicted RBP24.02■■□□□ 1.44
SEMA6C-210ENST00000621728 TEFQ10587 303 aa24.01■■□□□ 1.43
SEMA6C-210ENST00000621728 DDX54Q8TDD1 881 aaKnown RBP24.01■■□□□ 1.43
SEMA6C-210ENST00000621728 CCDC9Q9Y3X0 531 aaKnown RBP24.01■■□□□ 1.43
SEMA6C-210ENST00000621728 VAMP4O75379 141 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 UNC5CLQ8IV45 518 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 PCDH11XQ9BZA7 1347 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 PCDH11YQ9BZA8 1340 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 KDM3BQ7LBC6 1761 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 TWISTNBQ3B726 338 aaPredicted RBP24■■□□□ 1.43
SEMA6C-210ENST00000621728 C20orf194Q5TEA3 1177 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 ERICH6BQ5W0A0 696 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 SPATA31A5Q5VU36 1347 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 SPATA31A7Q8IWB4 1347 aa24■■□□□ 1.43
SEMA6C-210ENST00000621728 CT47B1P0C2W7 299 aaPredicted RBP23.99■■□□□ 1.43
SEMA6C-210ENST00000621728 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
SEMA6C-210ENST00000621728 SSH1Q8WYL5 1049 aa23.99■■□□□ 1.43
SEMA6C-210ENST00000621728 TCERG1O14776 1098 aaKnown RBP23.98■■□□□ 1.43
SEMA6C-210ENST00000621728 KCNQ3O43525 872 aa23.98■■□□□ 1.43
SEMA6C-210ENST00000621728 FNBP4Q8N3X1 1017 aaPredicted RBP23.98■■□□□ 1.43
SEMA6C-210ENST00000621728 SMC4Q9NTJ3 1288 aa23.96■■□□□ 1.43
SEMA6C-210ENST00000621728 FRAT1Q92837 279 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms