RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 PRIM1P49642 420 aaKnown RBP28.24■■■□□ 2.11
SMC6-210ENST00000621152 SYTL4Q96C24 671 aaPredicted RBP28.24■■■□□ 2.11
SMC6-210ENST00000621152 SPON1Q9HCB6 807 aa28.23■■■□□ 2.11
SMC6-210ENST00000621152 POLKQ9UBT6 870 aa28.23■■■□□ 2.11
SMC6-210ENST00000621152 RGPD3A6NKT7 1758 aaPredicted RBP28.23■■■□□ 2.11
SMC6-210ENST00000621152 RGPD4Q7Z3J3 1758 aa28.23■■■□□ 2.11
SMC6-210ENST00000621152 MEGF6O75095 1541 aa28.23■■■□□ 2.11
SMC6-210ENST00000621152 WASHC2AQ641Q2 1341 aa28.21■■■□□ 2.11
SMC6-210ENST00000621152 SLC15A2Q16348 729 aa28.21■■■□□ 2.11
SMC6-210ENST00000621152 KAT6BQ8WYB5 2073 aa28.2■■■□□ 2.11
SMC6-210ENST00000621152 NHSQ6T4R5 1651 aa28.2■■■□□ 2.11
SMC6-210ENST00000621152 PDGFDQ9GZP0 370 aaPredicted RBP28.2■■■□□ 2.1
SMC6-210ENST00000621152 LRRC4BQ9NT99 713 aa28.16■■■□□ 2.1
SMC6-210ENST00000621152 EYA1Q99502 592 aa28.15■■■□□ 2.1
SMC6-210ENST00000621152 PPP1R1BQ9UD71 204 aaPredicted RBP28.15■■■□□ 2.1
SMC6-210ENST00000621152 ZBTB7AO95365 584 aa28.14■■■□□ 2.1
SMC6-210ENST00000621152 KNSTRNQ9Y448 316 aa28.13■■■□□ 2.09
SMC6-210ENST00000621152 MORC1Q86VD1 984 aa28.12■■■□□ 2.09
SMC6-210ENST00000621152 ATF5Q9Y2D1 282 aaPredicted RBP28.12■■■□□ 2.09
SMC6-210ENST00000621152 BTAF1O14981 1849 aa28.12■■■□□ 2.09
SMC6-210ENST00000621152 SLC27A3Q5K4L6 730 aa28.11■■■□□ 2.09
SMC6-210ENST00000621152 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
SMC6-210ENST00000621152 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
SMC6-210ENST00000621152 CYP27B1O15528 508 aa28.1■■■□□ 2.09
SMC6-210ENST00000621152 KCNQ4P56696 695 aa28.1■■■□□ 2.09
SMC6-210ENST00000621152 MAP2P11137 1827 aaKnown RBP28.1■■■□□ 2.09
SMC6-210ENST00000621152 EIF4A2Q14240 407 aaKnown RBP28.09■■■□□ 2.09
SMC6-210ENST00000621152 KIF7Q2M1P5 1343 aa28.09■■■□□ 2.09
SMC6-210ENST00000621152 SPG7Q9UQ90 795 aa28.08■■■□□ 2.09
SMC6-210ENST00000621152 ZNF827Q17R98 1081 aa28.07■■■□□ 2.08
SMC6-210ENST00000621152 NSD2O96028 1365 aa28.07■■■□□ 2.08
SMC6-210ENST00000621152 SHANK3Q9BYB0 1731 aa28.06■■■□□ 2.08
SMC6-210ENST00000621152 MPRIPQ6WCQ1 1025 aa28.05■■■□□ 2.08
SMC6-210ENST00000621152 AKT1S1Q96B36 256 aa28.04■■■□□ 2.08
SMC6-210ENST00000621152 MTFR1LQ9H019 292 aa28.03■■■□□ 2.08
SMC6-210ENST00000621152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.03■■■□□ 2.082e-8■■■■■ 26.9
SMC6-210ENST00000621152 CCNL1Q9UK58 526 aaPredicted RBP28.03■■■□□ 2.08
SMC6-210ENST00000621152 NCAPD2Q15021 1401 aa28.02■■■□□ 2.08
SMC6-210ENST00000621152 PTGER2P43116 358 aa28.02■■■□□ 2.08
SMC6-210ENST00000621152 CASZ1Q86V15 1759 aa28.01■■■□□ 2.08
SMC6-210ENST00000621152 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
SMC6-210ENST00000621152 NKX1-1Q15270 411 aaPredicted RBP28.01■■■□□ 2.07
SMC6-210ENST00000621152 ANKRD26Q9UPS8 1709 aa28.01■■■□□ 2.07
SMC6-210ENST00000621152 AMER1Q5JTC6 1135 aaPredicted RBP28■■■□□ 2.07
SMC6-210ENST00000621152 TFCP2L1Q9NZI6 479 aa28■■■□□ 2.07
SMC6-210ENST00000621152 IFNL2Q8IZJ0 200 aa27.98■■■□□ 2.07
SMC6-210ENST00000621152 PER1O15534 1290 aaPredicted RBP27.96■■■□□ 2.07
SMC6-210ENST00000621152 PIGBQ92521 554 aa27.96■■■□□ 2.07
SMC6-210ENST00000621152 PAPPAQ13219 1627 aa27.96■■■□□ 2.07
SMC6-210ENST00000621152 IGSF1Q8N6C5 1336 aa27.95■■■□□ 2.07
SMC6-210ENST00000621152 PHKG2P15735 406 aa27.95■■■□□ 2.06
SMC6-210ENST00000621152 SMARCC1Q92922 1105 aaPredicted RBP27.94■■■□□ 2.06
SMC6-210ENST00000621152 SLC16A10Q8TF71 515 aa27.93■■■□□ 2.06
SMC6-210ENST00000621152 SGIP1Q9BQI5 828 aa27.93■■■□□ 2.06
SMC6-210ENST00000621152 PNPLA7Q6ZV29 1317 aa27.92■■■□□ 2.06
SMC6-210ENST00000621152 DCAF8L1A6NGE4 600 aa27.92■■■□□ 2.06
SMC6-210ENST00000621152 PLEKHO1Q53GL0 409 aaPredicted RBP27.92■■■□□ 2.06
SMC6-210ENST00000621152 PALLDQ8WX93 1383 aa27.91■■■□□ 2.06
SMC6-210ENST00000621152 CC2D1BQ5T0F9 858 aaKnown RBP27.91■■■□□ 2.06
SMC6-210ENST00000621152 PKD1L3Q7Z443 1732 aa27.9■■■□□ 2.06
SMC6-210ENST00000621152 HMGB2P26583 209 aaKnown RBP27.9■■■□□ 2.06
SMC6-210ENST00000621152 ARXQ96QS3 562 aa27.9■■■□□ 2.06
SMC6-210ENST00000621152 TMOD3Q9NYL9 352 aa27.9■■■□□ 2.06
SMC6-210ENST00000621152 LY75O60449 1722 aa27.89■■■□□ 2.06
SMC6-210ENST00000621152 MSH5O43196 834 aa27.89■■■□□ 2.06
SMC6-210ENST00000621152 MTHFSP49914 203 aa27.89■■■□□ 2.06
SMC6-210ENST00000621152 AEBP1Q8IUX7 1158 aa27.89■■■□□ 2.06
SMC6-210ENST00000621152 FHDC1Q9C0D6 1143 aaPredicted RBP27.89■■■□□ 2.06
SMC6-210ENST00000621152 IL13P35225 146 aa27.88■■■□□ 2.05
SMC6-210ENST00000621152 SULT6B1Q6IMI4 303 aa27.88■■■□□ 2.05
SMC6-210ENST00000621152 SYT17Q9BSW7 474 aa27.88■■■□□ 2.05
SMC6-210ENST00000621152 CNGB1Q14028 1251 aaPredicted RBP27.87■■■□□ 2.05
SMC6-210ENST00000621152 AMOTQ4VCS5 1084 aa27.87■■■□□ 2.05
SMC6-210ENST00000621152 COL23A1Q86Y22 540 aaPredicted RBP27.86■■■□□ 2.05
SMC6-210ENST00000621152 HSP90AB1P08238 724 aaKnown RBP27.85■■■□□ 2.05
SMC6-210ENST00000621152 ZNF530Q6P9A1 599 aaPredicted RBP27.85■■■□□ 2.05
SMC6-210ENST00000621152 ASAP1Q9ULH1 1129 aa27.85■■■□□ 2.05
SMC6-210ENST00000621152 POLD1P28340 1107 aa27.84■■■□□ 2.05
SMC6-210ENST00000621152 PLEKHG2Q9H7P9 1386 aa27.83■■■□□ 2.05
SMC6-210ENST00000621152 TOGARAM1Q9Y4F4 1720 aa27.82■■■□□ 2.04
SMC6-210ENST00000621152 LOC102724428A0A0B4J2F2 783 aa27.82■■■□□ 2.04
SMC6-210ENST00000621152 ERVV-2B6SEH9 535 aa27.82■■■□□ 2.04
SMC6-210ENST00000621152 SIK1P57059 783 aa27.82■■■□□ 2.04
SMC6-210ENST00000621152 DCAF5Q96JK2 942 aa27.82■■■□□ 2.04
SMC6-210ENST00000621152 ITGB4P16144 1822 aa27.81■■■□□ 2.04
SMC6-210ENST00000621152 ATG3Q9NT62 314 aa27.81■■■□□ 2.04
SMC6-210ENST00000621152 C1orf141Q5JVX7 400 aa27.79■■■□□ 2.04
SMC6-210ENST00000621152 FLAD1Q8NFF5 587 aa27.79■■■□□ 2.04
SMC6-210ENST00000621152 AK7Q96M32 723 aa27.79■■■□□ 2.04
SMC6-210ENST00000621152 ATP6V1AP38606 617 aa27.78■■■□□ 2.04
SMC6-210ENST00000621152 CABP4P57796 275 aa27.78■■■□□ 2.04
SMC6-210ENST00000621152 DIAPH1O60610 1272 aaKnown RBP27.77■■■□□ 2.04
SMC6-210ENST00000621152 KLHL34Q8N239 644 aa27.77■■■□□ 2.04
SMC6-210ENST00000621152 HMOX1P09601 288 aa27.76■■■□□ 2.03
SMC6-210ENST00000621152 QSER1Q2KHR3 1735 aa27.75■■■□□ 2.03
SMC6-210ENST00000621152 LINC00116Q8NCU8 138 aa27.75■■■□□ 2.03
SMC6-210ENST00000621152 KDRP35968 1356 aa27.74■■■□□ 2.03
SMC6-210ENST00000621152 NPC1L1Q9UHC9 1359 aa27.74■■■□□ 2.03
SMC6-210ENST00000621152 ITPK1Q13572 414 aa27.74■■■□□ 2.03
SMC6-210ENST00000621152 MSL1Q68DK7 614 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms