RNA–Protein interactions for RNA: ENST00000619917.4

POLR2E-214, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5 BASIC

Gene POLR2E, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-214ENST00000619917 NCAPD2Q15021 1401 aa29.55■■■□□ 2.32
POLR2E-214ENST00000619917 PARD3Q8TEW0 1356 aa29.54■■■□□ 2.32
POLR2E-214ENST00000619917 TATP17735 454 aaPredicted RBP29.54■■■□□ 2.32
POLR2E-214ENST00000619917 SHANK3Q9BYB0 1731 aa29.54■■■□□ 2.32
POLR2E-214ENST00000619917 PLSCR1O15162 318 aa29.52■■■□□ 2.32
POLR2E-214ENST00000619917 CNGB1Q14028 1251 aaPredicted RBP29.5■■■□□ 2.31
POLR2E-214ENST00000619917 NHSQ6T4R5 1651 aa29.5■■■□□ 2.31
POLR2E-214ENST00000619917 RREB1Q92766 1687 aa29.5■■■□□ 2.31
POLR2E-214ENST00000619917 PSDA5PKW4 1024 aaPredicted RBP29.49■■■□□ 2.31
POLR2E-214ENST00000619917 NPC1L1Q9UHC9 1359 aa29.48■■■□□ 2.31
POLR2E-214ENST00000619917 PROM2Q8N271 834 aa29.47■■■□□ 2.31
POLR2E-214ENST00000619917 NUP188Q5SRE5 1749 aa29.45■■■□□ 2.31
POLR2E-214ENST00000619917 MTHFSP49914 203 aa29.45■■■□□ 2.31
POLR2E-214ENST00000619917 IGSF1Q8N6C5 1336 aa29.45■■■□□ 2.3
POLR2E-214ENST00000619917 R3HDM1Q15032 1099 aaKnown RBP29.44■■■□□ 2.3
POLR2E-214ENST00000619917 CYP27B1O15528 508 aa29.43■■■□□ 2.3
POLR2E-214ENST00000619917 RGPD3A6NKT7 1758 aaPredicted RBP29.43■■■□□ 2.3
POLR2E-214ENST00000619917 RGPD4Q7Z3J3 1758 aa29.43■■■□□ 2.3
POLR2E-214ENST00000619917 PRIM1P49642 420 aaKnown RBP29.42■■■□□ 2.3
POLR2E-214ENST00000619917 PCDH11XQ9BZA7 1347 aa29.42■■■□□ 2.3
POLR2E-214ENST00000619917 PCDH11YQ9BZA8 1340 aa29.42■■■□□ 2.3
POLR2E-214ENST00000619917 KAT6BQ8WYB5 2073 aa29.41■■■□□ 2.3
POLR2E-214ENST00000619917 IL13P35225 146 aa29.41■■■□□ 2.3
POLR2E-214ENST00000619917 TXNRD1Q16881 649 aa29.4■■■□□ 2.3
POLR2E-214ENST00000619917 BTAF1O14981 1849 aa29.4■■■□□ 2.3
POLR2E-214ENST00000619917 PKD1L3Q7Z443 1732 aa29.4■■■□□ 2.3
POLR2E-214ENST00000619917 SYTL4Q96C24 671 aaPredicted RBP29.39■■■□□ 2.3
POLR2E-214ENST00000619917 DOT1LQ8TEK3 1739 aa29.39■■■□□ 2.3
POLR2E-214ENST00000619917 AEBP1Q8IUX7 1158 aa29.38■■■□□ 2.29
POLR2E-214ENST00000619917 SPG7Q9UQ90 795 aa29.37■■■□□ 2.29
POLR2E-214ENST00000619917 NBPF14Q5TI25 921 aa29.36■■■□□ 2.29
POLR2E-214ENST00000619917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.36■■■□□ 2.29
POLR2E-214ENST00000619917 ANO8Q9HCE9 1232 aaPredicted RBP29.35■■■□□ 2.29
POLR2E-214ENST00000619917 SULT6B1Q6IMI4 303 aa29.32■■■□□ 2.28
POLR2E-214ENST00000619917 NKX1-1Q15270 411 aaPredicted RBP29.31■■■□□ 2.28
POLR2E-214ENST00000619917 PHKG2P15735 406 aa29.3■■■□□ 2.28
POLR2E-214ENST00000619917 LRRC4BQ9NT99 713 aa29.29■■■□□ 2.28
POLR2E-214ENST00000619917 TOGARAM1Q9Y4F4 1720 aa29.28■■■□□ 2.28
POLR2E-214ENST00000619917 KDRP35968 1356 aa29.28■■■□□ 2.28
POLR2E-214ENST00000619917 DIAPH1O60610 1272 aaKnown RBP29.28■■■□□ 2.28
POLR2E-214ENST00000619917 IFNL2Q8IZJ0 200 aa29.28■■■□□ 2.28
POLR2E-214ENST00000619917 PLEKHG2Q9H7P9 1386 aa29.27■■■□□ 2.28
POLR2E-214ENST00000619917 COL3A1P02461 1466 aaPredicted RBP29.27■■■□□ 2.28
POLR2E-214ENST00000619917 PLEKHO1Q53GL0 409 aaPredicted RBP29.26■■■□□ 2.27
POLR2E-214ENST00000619917 MPRIPQ6WCQ1 1025 aa29.25■■■□□ 2.27
POLR2E-214ENST00000619917 SRCAPQ6ZRS2 3230 aa29.25■■■□□ 2.27
POLR2E-214ENST00000619917 HMOX1P09601 288 aa29.24■■■□□ 2.27
POLR2E-214ENST00000619917 PPP2R1AP30153 589 aa29.24■■■□□ 2.27
POLR2E-214ENST00000619917 KCNQ4P56696 695 aa29.24■■■□□ 2.27
POLR2E-214ENST00000619917 AMOTQ4VCS5 1084 aa29.22■■■□□ 2.27
POLR2E-214ENST00000619917 PAPPAQ13219 1627 aa29.21■■■□□ 2.27
POLR2E-214ENST00000619917 SLC15A2Q16348 729 aa29.21■■■□□ 2.27
POLR2E-214ENST00000619917 ZNF530Q6P9A1 599 aaPredicted RBP29.21■■■□□ 2.27
POLR2E-214ENST00000619917 PIGBQ92521 554 aa29.21■■■□□ 2.27
POLR2E-214ENST00000619917 STK32BQ9NY57 414 aa29.21■■■□□ 2.27
POLR2E-214ENST00000619917 ITGB4P16144 1822 aa29.2■■■□□ 2.27
POLR2E-214ENST00000619917 SLC27A3Q5K4L6 730 aa29.2■■■□□ 2.26
POLR2E-214ENST00000619917 PDGFDQ9GZP0 370 aaPredicted RBP29.2■■■□□ 2.26
POLR2E-214ENST00000619917 ZEB1P37275 1124 aaPredicted RBP29.19■■■□□ 2.26
POLR2E-214ENST00000619917 DDX10Q13206 875 aaKnown RBP29.19■■■□□ 2.26
POLR2E-214ENST00000619917 LY75O60449 1722 aa29.19■■■□□ 2.26
POLR2E-214ENST00000619917 ZNF827Q17R98 1081 aa29.18■■■□□ 2.26
POLR2E-214ENST00000619917 LRP5O75197 1615 aa29.17■■■□□ 2.26
POLR2E-214ENST00000619917 U2SURPO15042 1029 aaKnown RBP29.16■■■□□ 2.26
POLR2E-214ENST00000619917 CCNL1Q9UK58 526 aaPredicted RBP29.16■■■□□ 2.26
POLR2E-214ENST00000619917 KDM6AO15550 1401 aaPredicted RBP29.15■■■□□ 2.26
POLR2E-214ENST00000619917 TMOD3Q9NYL9 352 aa29.15■■■□□ 2.26
POLR2E-214ENST00000619917 PALLDQ8WX93 1383 aa29.14■■■□□ 2.26
POLR2E-214ENST00000619917 AKT1S1Q96B36 256 aa29.14■■■□□ 2.26
POLR2E-214ENST00000619917 DCAF5Q96JK2 942 aa29.14■■■□□ 2.26
POLR2E-214ENST00000619917 CFAP53Q96M91 514 aa29.14■■■□□ 2.26
POLR2E-214ENST00000619917 HSP90AB1P08238 724 aaKnown RBP29.13■■■□□ 2.25
POLR2E-214ENST00000619917 CASZ1Q86V15 1759 aa29.12■■■□□ 2.25
POLR2E-214ENST00000619917 C1orf141Q5JVX7 400 aa29.12■■■□□ 2.25
POLR2E-214ENST00000619917 ERVV-2B6SEH9 535 aa29.11■■■□□ 2.25
POLR2E-214ENST00000619917 SMARCC1Q92922 1105 aaPredicted RBP29.11■■■□□ 2.25
POLR2E-214ENST00000619917 ASAP1Q9ULH1 1129 aa29.11■■■□□ 2.25
POLR2E-214ENST00000619917 MTHFSDQ2M296 383 aaKnown RBP29.1■■■□□ 2.25
POLR2E-214ENST00000619917 AKAP4Q5JQC9 854 aa29.08■■■□□ 2.25
POLR2E-214ENST00000619917 ATG3Q9NT62 314 aa29.08■■■□□ 2.25
POLR2E-214ENST00000619917 ZBTB7AO95365 584 aa29.07■■■□□ 2.24
POLR2E-214ENST00000619917 CABP4P57796 275 aa29.05■■■□□ 2.24
POLR2E-214ENST00000619917 SPON1Q9HCB6 807 aa29.05■■■□□ 2.24
POLR2E-214ENST00000619917 LGR6Q9HBX8 967 aa29.04■■■□□ 2.24
POLR2E-214ENST00000619917 NUDCQ9Y266 331 aa29.04■■■□□ 2.24
POLR2E-214ENST00000619917 LOC102724428A0A0B4J2F2 783 aa29.03■■■□□ 2.24
POLR2E-214ENST00000619917 SIK1P57059 783 aa29.03■■■□□ 2.24
POLR2E-214ENST00000619917 RSPH6AQ9H0K4 717 aa29.03■■■□□ 2.24
POLR2E-214ENST00000619917 PNPLA7Q6ZV29 1317 aa29.02■■■□□ 2.24
POLR2E-214ENST00000619917 NFATC2IPQ8NCF5 419 aa29.02■■■□□ 2.24
POLR2E-214ENST00000619917 TFCP2L1Q9NZI6 479 aa29.02■■■□□ 2.24
POLR2E-214ENST00000619917 ATF5Q9Y2D1 282 aaPredicted RBP29.02■■■□□ 2.24
POLR2E-214ENST00000619917 U2AF1L5P0DN76 240 aaPredicted RBP29.01■■■□□ 2.23
POLR2E-214ENST00000619917 PRKAR2BP31323 418 aa29.01■■■□□ 2.23
POLR2E-214ENST00000619917 U2AF1Q01081 240 aaKnown RBP eCLIP29.01■■■□□ 2.23
POLR2E-214ENST00000619917 C5P01031 1676 aa29■■■□□ 2.23
POLR2E-214ENST00000619917 PHACTR3Q96KR7 559 aa29■■■□□ 2.23
POLR2E-214ENST00000619917 TUBGCP6Q96RT7 1819 aa28.99■■■□□ 2.23
POLR2E-214ENST00000619917 SCN11AQ9UI33 1791 aa28.99■■■□□ 2.23
POLR2E-214ENST00000619917 RNMTO43148 476 aaKnown RBP28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms