RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 GAS2L2Q8NHY3 880 aa32.41■■■□□ 2.78
VEGFC-202ENST00000618562 NBPF4Q96M43 638 aa32.41■■■□□ 2.78
VEGFC-202ENST00000618562 AAMPQ13685 434 aa32.41■■■□□ 2.78
VEGFC-202ENST00000618562 TNNQ9UQP3 1299 aa32.41■■■□□ 2.78
VEGFC-202ENST00000618562 SLAIN2Q9P270 581 aa32.39■■■□□ 2.78
VEGFC-202ENST00000618562 RGPD5Q99666 1765 aa32.38■■■□□ 2.77
VEGFC-202ENST00000618562 CRB1P82279 1406 aa32.38■■■□□ 2.77
VEGFC-202ENST00000618562 SPATA31A3Q5VYP0 1347 aa32.38■■■□□ 2.77
VEGFC-202ENST00000618562 CRYBG1Q9Y4K1 1723 aa32.38■■■□□ 2.77
VEGFC-202ENST00000618562 RLBP1P12271 317 aa32.38■■■□□ 2.77
VEGFC-202ENST00000618562 TSPYL6Q8N831 410 aa32.38■■■□□ 2.77
VEGFC-202ENST00000618562 COG6Q9Y2V7 657 aa32.37■■■□□ 2.77
VEGFC-202ENST00000618562 VAMP4O75379 141 aa32.36■■■□□ 2.77
VEGFC-202ENST00000618562 CLUAP1Q96AJ1 413 aa32.36■■■□□ 2.77
VEGFC-202ENST00000618562 ALDH1L2Q3SY69 923 aa32.36■■■□□ 2.77
VEGFC-202ENST00000618562 LRRC59Q96AG4 307 aaKnown RBP32.36■■■□□ 2.77
VEGFC-202ENST00000618562 ZNF428Q96B54 188 aa32.36■■■□□ 2.77
VEGFC-202ENST00000618562 AXIN2Q9Y2T1 843 aa32.36■■■□□ 2.77
VEGFC-202ENST00000618562 CHL1O00533 1208 aa32.35■■■□□ 2.77
VEGFC-202ENST00000618562 ZKSCAN2Q63HK3 967 aa32.35■■■□□ 2.77
VEGFC-202ENST00000618562 ZC3H6P61129 1189 aaKnown RBP32.35■■■□□ 2.77
VEGFC-202ENST00000618562 FAM161AQ3B820 660 aa32.34■■■□□ 2.77
VEGFC-202ENST00000618562 RTF1Q92541 710 aaKnown RBP32.34■■■□□ 2.77
VEGFC-202ENST00000618562 NCAPD2Q15021 1401 aa32.34■■■□□ 2.77
VEGFC-202ENST00000618562 LRRC37A3O60309 1634 aa32.33■■■□□ 2.77
VEGFC-202ENST00000618562 CAMTA1Q9Y6Y1 1673 aa32.33■■■□□ 2.77
VEGFC-202ENST00000618562 C8orf58Q8NAV2 365 aa32.33■■■□□ 2.77
VEGFC-202ENST00000618562 ANKRD24Q8TF21 1146 aa32.33■■■□□ 2.77
VEGFC-202ENST00000618562 HTATSF1O43719 755 aaKnown RBP32.31■■■□□ 2.76
VEGFC-202ENST00000618562 CABLES1Q8TDN4 633 aa32.31■■■□□ 2.76
VEGFC-202ENST00000618562 TWISTNBQ3B726 338 aaPredicted RBP32.3■■■□□ 2.76
VEGFC-202ENST00000618562 COL18A1P39060 1754 aa32.3■■■□□ 2.76
VEGFC-202ENST00000618562 GNAT3A8MTJ3 354 aa32.3■■■□□ 2.76
VEGFC-202ENST00000618562 ELL2O00472 640 aaPredicted RBP32.3■■■□□ 2.76
VEGFC-202ENST00000618562 DDRGK1Q96HY6 314 aa32.3■■■□□ 2.76
VEGFC-202ENST00000618562 NOB1Q9ULX3 412 aaKnown RBP32.3■■■□□ 2.76
VEGFC-202ENST00000618562 KIF16BQ96L93 1317 aa32.29■■■□□ 2.76
VEGFC-202ENST00000618562 MAP3K5Q99683 1374 aa32.29■■■□□ 2.76
VEGFC-202ENST00000618562 TRIM27P14373 513 aa32.28■■■□□ 2.76
VEGFC-202ENST00000618562 BRPF1P55201 1214 aaPredicted RBP32.28■■■□□ 2.76
VEGFC-202ENST00000618562 SOS2Q07890 1332 aaPredicted RBP32.28■■■□□ 2.76
VEGFC-202ENST00000618562 C8orf34Q49A92 452 aa32.27■■■□□ 2.76
VEGFC-202ENST00000618562 DZIP1LQ8IYY4 767 aaKnown RBP32.27■■■□□ 2.76
VEGFC-202ENST00000618562 IGHDP01880 384 aa32.27■■■□□ 2.76
VEGFC-202ENST00000618562 ATF7IPQ6VMQ6 1270 aa32.27■■■□□ 2.76
VEGFC-202ENST00000618562 ERBB3P21860 1342 aa32.26■■■□□ 2.75
VEGFC-202ENST00000618562 VIRMAQ69YN4 1812 aaKnown RBP32.26■■■□□ 2.75
VEGFC-202ENST00000618562 LMO7Q8WWI1 1683 aa32.25■■■□□ 2.75
VEGFC-202ENST00000618562 FTSJ3Q8IY81 847 aaKnown RBP32.24■■■□□ 2.75
VEGFC-202ENST00000618562 MRPL50Q8N5N7 158 aaKnown RBP32.23■■■□□ 2.75
VEGFC-202ENST00000618562 KIAA0232Q92628 1395 aa32.23■■■□□ 2.75
VEGFC-202ENST00000618562 RGS3P49796 1198 aa32.23■■■□□ 2.75
VEGFC-202ENST00000618562 MVPQ14764 893 aaKnown RBP32.23■■■□□ 2.75
VEGFC-202ENST00000618562 KRT24Q2M2I5 525 aa32.23■■■□□ 2.75
VEGFC-202ENST00000618562 IL17REQ8NFR9 667 aa32.22■■■□□ 2.75
VEGFC-202ENST00000618562 MIS18AQ9NYP9 233 aa32.22■■■□□ 2.75
VEGFC-202ENST00000618562 IPO8O15397 1037 aaKnown RBP32.22■■■□□ 2.75
VEGFC-202ENST00000618562 ABCC6O95255 1503 aa32.22■■■□□ 2.75
VEGFC-202ENST00000618562 NHSL1Q5SYE7 1610 aa32.21■■■□□ 2.75
VEGFC-202ENST00000618562 CPDO75976 1380 aa32.19■■■□□ 2.74
VEGFC-202ENST00000618562 TSPYL4Q9UJ04 414 aa32.19■■■□□ 2.74
VEGFC-202ENST00000618562 NBR1Q14596 966 aa32.17■■■□□ 2.74
VEGFC-202ENST00000618562 CHRNA2Q15822 529 aa32.17■■■□□ 2.74
VEGFC-202ENST00000618562 CEMIPQ8WUJ3 1361 aa32.15■■■□□ 2.74
VEGFC-202ENST00000618562 FAM208AQ9UK61 1670 aaKnown RBP32.15■■■□□ 2.74
VEGFC-202ENST00000618562 PLEKHO1Q53GL0 409 aaPredicted RBP32.15■■■□□ 2.74
VEGFC-202ENST00000618562 ARHGAP45Q92619 1136 aa32.14■■■□□ 2.74
VEGFC-202ENST00000618562 ABCA3Q99758 1704 aa32.14■■■□□ 2.74
VEGFC-202ENST00000618562 AMOTQ4VCS5 1084 aa32.14■■■□□ 2.74
VEGFC-202ENST00000618562 TMEM57Q8N5G2 664 aa32.13■■■□□ 2.73
VEGFC-202ENST00000618562 HAP1P54257 671 aaPredicted RBP32.12■■■□□ 2.73
VEGFC-202ENST00000618562 ZNF530Q6P9A1 599 aaPredicted RBP32.12■■■□□ 2.73
VEGFC-202ENST00000618562 AKAP4Q5JQC9 854 aa32.11■■■□□ 2.73
VEGFC-202ENST00000618562 ITPRIPQ8IWB1 547 aa32.11■■■□□ 2.73
VEGFC-202ENST00000618562 NLRP2Q9NX02 1062 aa32.11■■■□□ 2.73
VEGFC-202ENST00000618562 TAF7Q15545 349 aaPredicted RBP32.1■■■□□ 2.73
VEGFC-202ENST00000618562 DDX19BQ9UMR2 479 aa32.1■■■□□ 2.73
VEGFC-202ENST00000618562 PCDHB15Q9Y5E8 787 aa32.1■■■□□ 2.73
VEGFC-202ENST00000618562 LTBP4Q8N2S1 1624 aa32.09■■■□□ 2.73
VEGFC-202ENST00000618562 LGR6Q9HBX8 967 aa32.09■■■□□ 2.73
VEGFC-202ENST00000618562 BABAM1Q9NWV8 329 aa32.09■■■□□ 2.73
VEGFC-202ENST00000618562 RTL5Q5HYW3 569 aaPredicted RBP32.08■■■□□ 2.73
VEGFC-202ENST00000618562 RWDD1Q9H446 243 aaPredicted RBP32.07■■■□□ 2.72
VEGFC-202ENST00000618562 CSB-PGBD3P0DP91 1061 aa32.05■■■□□ 2.72
VEGFC-202ENST00000618562 ABCC4O15439 1325 aa32.04■■■□□ 2.72
VEGFC-202ENST00000618562 C1orf141Q5JVX7 400 aa32.04■■■□□ 2.72
VEGFC-202ENST00000618562 PRDM11Q9NQV5 511 aa32.03■■■□□ 2.72
VEGFC-202ENST00000618562 KDM3BQ7LBC6 1761 aa32.03■■■□□ 2.72
VEGFC-202ENST00000618562 MEGF6O75095 1541 aa32.03■■■□□ 2.72
VEGFC-202ENST00000618562 MPRIPQ6WCQ1 1025 aa32.03■■■□□ 2.72
VEGFC-202ENST00000618562 RAPGEF4Q8WZA2 1011 aa32.03■■■□□ 2.72
VEGFC-202ENST00000618562 ROBO1Q9Y6N7 1651 aa32.02■■■□□ 2.72
VEGFC-202ENST00000618562 API5Q9BZZ5 524 aaKnown RBP32.01■■■□□ 2.72
VEGFC-202ENST00000618562 OVOS2A0A0G2JMS6 1433 aa32.01■■■□□ 2.71
VEGFC-202ENST00000618562 ADAMTS7Q9UKP4 1686 aa32■■■□□ 2.71
VEGFC-202ENST00000618562 ZBTB40Q9NUA8 1239 aa32■■■□□ 2.71
VEGFC-202ENST00000618562 RNMTO43148 476 aaKnown RBP31.99■■■□□ 2.71
VEGFC-202ENST00000618562 USP35Q9P2H5 1018 aa31.99■■■□□ 2.71
VEGFC-202ENST00000618562 RGS12O14924 1447 aa31.98■■■□□ 2.71
VEGFC-202ENST00000618562 DEKP35659 375 aaKnown RBP31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms