RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 PLEKHF1Q96S99 279 aa9.95□□□□□ -0.82
VPS45-213ENST00000618148 RSPH6AQ9H0K4 717 aa9.95□□□□□ -0.82
VPS45-213ENST00000618148 RGPD5Q99666 1765 aa9.95□□□□□ -0.82
VPS45-213ENST00000618148 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
VPS45-213ENST00000618148 ATMINO43313 823 aaPredicted RBP9.94□□□□□ -0.82
VPS45-213ENST00000618148 EYA1Q99502 592 aa9.94□□□□□ -0.82
VPS45-213ENST00000618148 LRP6O75581 1613 aa9.94□□□□□ -0.82
VPS45-213ENST00000618148 NWD2Q9ULI1 1742 aa9.94□□□□□ -0.82
VPS45-213ENST00000618148 SLIT2O94813 1529 aa9.93□□□□□ -0.82
VPS45-213ENST00000618148 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
VPS45-213ENST00000618148 CHRNA2Q15822 529 aa9.93□□□□□ -0.82
VPS45-213ENST00000618148 NGEFQ8N5V2 710 aa9.93□□□□□ -0.82
VPS45-213ENST00000618148 ANKRD24Q8TF21 1146 aa9.93□□□□□ -0.82
VPS45-213ENST00000618148 PLCH1Q4KWH8 1693 aa9.93□□□□□ -0.82
VPS45-213ENST00000618148 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
VPS45-213ENST00000618148 RUNDC1Q96C34 613 aa9.93□□□□□ -0.82
VPS45-213ENST00000618148 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 NRAPQ86VF7 1730 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 POTEJP0CG39 1038 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 NBPF6Q5VWK0 638 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 AEBP1Q8IUX7 1158 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 NBPF4Q96M43 638 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 PNNQ9H307 717 aaKnown RBP9.92□□□□□ -0.82
VPS45-213ENST00000618148 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
VPS45-213ENST00000618148 RGPD2P0DJD1 1756 aa9.91□□□□□ -0.82
VPS45-213ENST00000618148 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
VPS45-213ENST00000618148 SULT6B1Q6IMI4 303 aa9.91□□□□□ -0.82
VPS45-213ENST00000618148 FBXO41Q8TF61 875 aa9.91□□□□□ -0.82
VPS45-213ENST00000618148 PRKAR2BP31323 418 aa9.9□□□□□ -0.82
VPS45-213ENST00000618148 HNRNPUQ00839 825 aaKnown RBP eCLIP9.9□□□□□ -0.82
VPS45-213ENST00000618148 ZNF521Q96K83 1311 aa9.9□□□□□ -0.82
VPS45-213ENST00000618148 CRB1P82279 1406 aa9.9□□□□□ -0.83
VPS45-213ENST00000618148 ZBTB7CA1YPR0 619 aa9.9□□□□□ -0.83
VPS45-213ENST00000618148 SPDYE4A6NLX3 237 aa9.9□□□□□ -0.83
VPS45-213ENST00000618148 HMOX1P09601 288 aa9.9□□□□□ -0.83
VPS45-213ENST00000618148 CCDC27Q2M243 656 aa9.9□□□□□ -0.83
VPS45-213ENST00000618148 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.89□□□□□ -0.83
VPS45-213ENST00000618148 CCDC146Q8IYE0 955 aa9.89□□□□□ -0.83
VPS45-213ENST00000618148 FNBP4Q8N3X1 1017 aaPredicted RBP9.89□□□□□ -0.83
VPS45-213ENST00000618148 TCP11L2Q8N4U5 519 aa9.89□□□□□ -0.83
VPS45-213ENST00000618148 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
VPS45-213ENST00000618148 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
VPS45-213ENST00000618148 CARD10Q9BWT7 1032 aa9.89□□□□□ -0.83
VPS45-213ENST00000618148 SCUBE2Q9NQ36 999 aa9.89□□□□□ -0.83
VPS45-213ENST00000618148 BTG4Q9NY30 223 aa9.89□□□□□ -0.83
VPS45-213ENST00000618148 BCL9LQ86UU0 1499 aa9.88□□□□□ -0.83
VPS45-213ENST00000618148 APAF1O14727 1248 aa9.88□□□□□ -0.83
VPS45-213ENST00000618148 ADAMTS2O95450 1211 aa9.88□□□□□ -0.83
VPS45-213ENST00000618148 FAM163AQ96GL9 167 aaPredicted RBP9.88□□□□□ -0.83
VPS45-213ENST00000618148 PKD1L3Q7Z443 1732 aa9.87□□□□□ -0.83
VPS45-213ENST00000618148 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
VPS45-213ENST00000618148 TMPOP42166 694 aaKnown RBP9.87□□□□□ -0.83
VPS45-213ENST00000618148 YTHDC1Q96MU7 727 aaKnown RBP9.87□□□□□ -0.83
VPS45-213ENST00000618148 MEGF6O75095 1541 aa9.87□□□□□ -0.83
VPS45-213ENST00000618148 OVOS2A0A0G2JMS6 1433 aa9.87□□□□□ -0.83
VPS45-213ENST00000618148 DISP2A7MBM2 1401 aa9.87□□□□□ -0.83
VPS45-213ENST00000618148 NUTM2BA6NNL0 878 aaPredicted RBP9.87□□□□□ -0.83
VPS45-213ENST00000618148 NUTM2EB1AL46 878 aaPredicted RBP9.87□□□□□ -0.83
VPS45-213ENST00000618148 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
VPS45-213ENST00000618148 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
VPS45-213ENST00000618148 NUTM2AQ8IVF1 878 aaPredicted RBP9.87□□□□□ -0.83
VPS45-213ENST00000618148 NLRP2Q9NX02 1062 aa9.87□□□□□ -0.83
VPS45-213ENST00000618148 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS45-213ENST00000618148 CSB-PGBD3P0DP91 1061 aa9.86□□□□□ -0.83
VPS45-213ENST00000618148 LCE2DQ5TA82 110 aaPredicted RBP9.86□□□□□ -0.83
VPS45-213ENST00000618148 USHBP1Q8N6Y0 703 aa9.86□□□□□ -0.83
VPS45-213ENST00000618148 PARP4Q9UKK3 1724 aaKnown RBP9.86□□□□□ -0.83
VPS45-213ENST00000618148 NEFMP07197 916 aa9.85□□□□□ -0.83
VPS45-213ENST00000618148 TRIM35Q9UPQ4 493 aa9.85□□□□□ -0.83
VPS45-213ENST00000618148 WNK3Q9BYP7 1800 aa9.85□□□□□ -0.83
VPS45-213ENST00000618148 SPATA31A5Q5VU36 1347 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 SPATA31A7Q8IWB4 1347 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 ADAMTS7Q9UKP4 1686 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 EVA1CP58658 441 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 PDE3BQ13370 1112 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 TOM1L2Q6ZVM7 507 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 UNC5CLQ8IV45 518 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 WWC1Q8IX03 1113 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 GAS2L2Q8NHY3 880 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 DLG5Q8TDM6 1919 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 SPATA31A1Q5TZJ5 1347 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 LRRC37A3O60309 1634 aa9.84□□□□□ -0.83
VPS45-213ENST00000618148 VPS72Q15906 364 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 MTHFSDQ2M296 383 aaKnown RBP9.83□□□□□ -0.84
VPS45-213ENST00000618148 RAPGEF4Q8WZA2 1011 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 C8orf37Q96NL8 207 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 THRAP3Q9Y2W1 955 aaKnown RBP9.83□□□□□ -0.84
VPS45-213ENST00000618148 ATRNO75882 1429 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 HTATSF1O43719 755 aaKnown RBP9.83□□□□□ -0.84
VPS45-213ENST00000618148 RIPK4P57078 832 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 LMOD3Q0VAK6 560 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 WDR63Q8IWG1 891 aa9.83□□□□□ -0.84
VPS45-213ENST00000618148 RRP7AQ9Y3A4 280 aaKnown RBP9.83□□□□□ -0.84
VPS45-213ENST00000618148 SHANK3Q9BYB0 1731 aa9.82□□□□□ -0.84
VPS45-213ENST00000618148 IL16Q14005 1332 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms