RNA–Protein interactions for RNA: ENST00000617888.1

LINC01971-201, Transcript of long intergenic non-protein coding RNA 1971, humanhuman

BASIC

Gene LINC01971, Length 1,048 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01971-201ENST00000617888 NUP188Q5SRE5 1749 aa35.4■■■■□ 3.26
LINC01971-201ENST00000617888 NBPF14Q5TI25 921 aa35.38■■■■□ 3.25
LINC01971-201ENST00000617888 KCNQ2O43526 872 aa35.37■■■■□ 3.25
LINC01971-201ENST00000617888 TATP17735 454 aaPredicted RBP35.37■■■■□ 3.25
LINC01971-201ENST00000617888 R3HDM1Q15032 1099 aaKnown RBP35.37■■■■□ 3.25
LINC01971-201ENST00000617888 ACSBG1Q96GR2 724 aa35.37■■■■□ 3.25
LINC01971-201ENST00000617888 NCAPD2Q15021 1401 aa35.36■■■■□ 3.25
LINC01971-201ENST00000617888 MORC1Q86VD1 984 aa35.36■■■■□ 3.25
LINC01971-201ENST00000617888 AMER1Q5JTC6 1135 aaPredicted RBP35.33■■■■□ 3.25
LINC01971-201ENST00000617888 SHANK3Q9BYB0 1731 aa35.32■■■■□ 3.24
LINC01971-201ENST00000617888 PCDH11XQ9BZA7 1347 aa35.29■■■■□ 3.24
LINC01971-201ENST00000617888 PCDH11YQ9BZA8 1340 aa35.29■■■■□ 3.24
LINC01971-201ENST00000617888 PROM2Q8N271 834 aa35.28■■■■□ 3.24
LINC01971-201ENST00000617888 EYA1Q99502 592 aa35.28■■■■□ 3.24
LINC01971-201ENST00000617888 PER1O15534 1290 aaPredicted RBP35.27■■■■□ 3.24
LINC01971-201ENST00000617888 EIF4A2Q14240 407 aaKnown RBP35.27■■■■□ 3.24
LINC01971-201ENST00000617888 TXNRD1Q16881 649 aa35.27■■■■□ 3.24
LINC01971-201ENST00000617888 LRP5O75197 1615 aa35.26■■■■□ 3.24
LINC01971-201ENST00000617888 BTAF1O14981 1849 aa35.24■■■■□ 3.23
LINC01971-201ENST00000617888 PLEKHG2Q9H7P9 1386 aa35.22■■■■□ 3.23
LINC01971-201ENST00000617888 PRIM1P49642 420 aaKnown RBP35.21■■■■□ 3.23
LINC01971-201ENST00000617888 KAT6BQ8WYB5 2073 aa35.21■■■■□ 3.23
LINC01971-201ENST00000617888 DOT1LQ8TEK3 1739 aa35.2■■■■□ 3.23
LINC01971-201ENST00000617888 SYTL4Q96C24 671 aaPredicted RBP35.2■■■■□ 3.23
LINC01971-201ENST00000617888 PKD1L3Q7Z443 1732 aa35.2■■■■□ 3.23
LINC01971-201ENST00000617888 IGSF1Q8N6C5 1336 aa35.19■■■■□ 3.22
LINC01971-201ENST00000617888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.19■■■■□ 3.22
LINC01971-201ENST00000617888 NPC1L1Q9UHC9 1359 aa35.19■■■■□ 3.22
LINC01971-201ENST00000617888 SPG7Q9UQ90 795 aa35.19■■■■□ 3.22
LINC01971-201ENST00000617888 ANO8Q9HCE9 1232 aaPredicted RBP35.18■■■■□ 3.22
LINC01971-201ENST00000617888 CYP27B1O15528 508 aa35.16■■■■□ 3.22
LINC01971-201ENST00000617888 CC2D1BQ5T0F9 858 aaKnown RBP35.13■■■■□ 3.21
LINC01971-201ENST00000617888 STK32BQ9NY57 414 aa35.13■■■■□ 3.21
LINC01971-201ENST00000617888 SLC27A3Q5K4L6 730 aa35.12■■■■□ 3.21
LINC01971-201ENST00000617888 NKX1-1Q15270 411 aaPredicted RBP35.1■■■■□ 3.21
LINC01971-201ENST00000617888 SLC15A2Q16348 729 aa35.08■■■■□ 3.21
LINC01971-201ENST00000617888 PAPPAQ13219 1627 aa35.07■■■■□ 3.21
LINC01971-201ENST00000617888 MTHFSP49914 203 aa35.07■■■■□ 3.2
LINC01971-201ENST00000617888 IL13P35225 146 aa35.05■■■■□ 3.2
LINC01971-201ENST00000617888 IFNL2Q8IZJ0 200 aa35.05■■■■□ 3.2
LINC01971-201ENST00000617888 LRRC4BQ9NT99 713 aa35.05■■■■□ 3.2
LINC01971-201ENST00000617888 PHKG2P15735 406 aa35.03■■■■□ 3.2
LINC01971-201ENST00000617888 KDRP35968 1356 aa35.01■■■■□ 3.2
LINC01971-201ENST00000617888 LY75O60449 1722 aa35.01■■■■□ 3.2
LINC01971-201ENST00000617888 SPON1Q9HCB6 807 aa35.01■■■■□ 3.2
LINC01971-201ENST00000617888 TOGARAM1Q9Y4F4 1720 aa35.01■■■■□ 3.19
LINC01971-201ENST00000617888 CASZ1Q86V15 1759 aa35■■■■□ 3.19
LINC01971-201ENST00000617888 AMOTQ4VCS5 1084 aa35■■■■□ 3.19
LINC01971-201ENST00000617888 PLEKHO1Q53GL0 409 aaPredicted RBP35■■■■□ 3.19
LINC01971-201ENST00000617888 MPRIPQ6WCQ1 1025 aa35■■■■□ 3.19
LINC01971-201ENST00000617888 SULT6B1Q6IMI4 303 aa34.98■■■■□ 3.19
LINC01971-201ENST00000617888 AEBP1Q8IUX7 1158 aa34.98■■■■□ 3.19
LINC01971-201ENST00000617888 CCNL1Q9UK58 526 aaPredicted RBP34.97■■■■□ 3.19
LINC01971-201ENST00000617888 HMGB2P26583 209 aaKnown RBP34.96■■■■□ 3.19
LINC01971-201ENST00000617888 HSP90AB1P08238 724 aaKnown RBP34.95■■■■□ 3.19
LINC01971-201ENST00000617888 ZNF827Q17R98 1081 aa34.95■■■■□ 3.19
LINC01971-201ENST00000617888 SMARCC1Q92922 1105 aaPredicted RBP34.95■■■■□ 3.19
LINC01971-201ENST00000617888 PALLDQ8WX93 1383 aa34.95■■■■□ 3.19
LINC01971-201ENST00000617888 AKT1S1Q96B36 256 aa34.94■■■■□ 3.18
LINC01971-201ENST00000617888 DIAPH1O60610 1272 aaKnown RBP34.93■■■■□ 3.18
LINC01971-201ENST00000617888 CNGB1Q14028 1251 aaPredicted RBP34.93■■■■□ 3.18
LINC01971-201ENST00000617888 PIGBQ92521 554 aa34.93■■■■□ 3.18
LINC01971-201ENST00000617888 PDGFDQ9GZP0 370 aaPredicted RBP34.93■■■■□ 3.18
LINC01971-201ENST00000617888 ITGB4P16144 1822 aa34.92■■■■□ 3.18
LINC01971-201ENST00000617888 TMOD3Q9NYL9 352 aa34.92■■■■□ 3.18
LINC01971-201ENST00000617888 ZNF530Q6P9A1 599 aaPredicted RBP34.91■■■■□ 3.18
LINC01971-201ENST00000617888 KCNQ4P56696 695 aa34.9■■■■□ 3.18
LINC01971-201ENST00000617888 DCAF5Q96JK2 942 aa34.9■■■■□ 3.18
LINC01971-201ENST00000617888 ZBTB7AO95365 584 aa34.88■■■■□ 3.17
LINC01971-201ENST00000617888 COL3A1P02461 1466 aaPredicted RBP34.87■■■■□ 3.17
LINC01971-201ENST00000617888 ERVV-2B6SEH9 535 aa34.87■■■■□ 3.17
LINC01971-201ENST00000617888 C1orf141Q5JVX7 400 aa34.87■■■■□ 3.17
LINC01971-201ENST00000617888 MTFR1LQ9H019 292 aa34.87■■■■□ 3.17
LINC01971-201ENST00000617888 TFCP2L1Q9NZI6 479 aa34.85■■■■□ 3.17
LINC01971-201ENST00000617888 PPP1R1BQ9UD71 204 aaPredicted RBP34.85■■■■□ 3.17
LINC01971-201ENST00000617888 QSER1Q2KHR3 1735 aa34.84■■■■□ 3.17
LINC01971-201ENST00000617888 KDM6AO15550 1401 aaPredicted RBP34.82■■■■□ 3.17
LINC01971-201ENST00000617888 HMOX1P09601 288 aa34.82■■■■□ 3.16
LINC01971-201ENST00000617888 CFAP53Q96M91 514 aa34.81■■■■□ 3.16
LINC01971-201ENST00000617888 PNPLA7Q6ZV29 1317 aa34.81■■■■□ 3.16
LINC01971-201ENST00000617888 SLC16A10Q8TF71 515 aa34.8■■■■□ 3.16
LINC01971-201ENST00000617888 ATF5Q9Y2D1 282 aaPredicted RBP34.8■■■■□ 3.16
LINC01971-201ENST00000617888 C5P01031 1676 aa34.79■■■■□ 3.16
LINC01971-201ENST00000617888 PTGER2P43116 358 aa34.79■■■■□ 3.16
LINC01971-201ENST00000617888 ASAP1Q9ULH1 1129 aa34.78■■■■□ 3.16
LINC01971-201ENST00000617888 LOC102724428A0A0B4J2F2 783 aa34.77■■■■□ 3.16
LINC01971-201ENST00000617888 SIK1P57059 783 aa34.77■■■■□ 3.16
LINC01971-201ENST00000617888 AKAP4Q5JQC9 854 aa34.77■■■■□ 3.16
LINC01971-201ENST00000617888 PPP2R1AP30153 589 aa34.76■■■■□ 3.16
LINC01971-201ENST00000617888 CABP4P57796 275 aa34.76■■■■□ 3.16
LINC01971-201ENST00000617888 ATG3Q9NT62 314 aa34.76■■■■□ 3.16
LINC01971-201ENST00000617888 U2SURPO15042 1029 aaKnown RBP34.75■■■■□ 3.15
LINC01971-201ENST00000617888 TUBGCP6Q96RT7 1819 aa34.74■■■■□ 3.15
LINC01971-201ENST00000617888 SGIP1Q9BQI5 828 aa34.73■■■■□ 3.15
LINC01971-201ENST00000617888 TAF1LQ8IZX4 1826 aa34.73■■■■□ 3.15
LINC01971-201ENST00000617888 C4BP0C0L5 1744 aa34.7■■■■□ 3.15
LINC01971-201ENST00000617888 FLAD1Q8NFF5 587 aa34.7■■■■□ 3.15
LINC01971-201ENST00000617888 NUDCQ9Y266 331 aa34.7■■■■□ 3.15
LINC01971-201ENST00000617888 AK7Q96M32 723 aa34.69■■■■□ 3.14
LINC01971-201ENST00000617888 ATP6V1AP38606 617 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms