RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 PSDA5PKW4 1024 aaPredicted RBP30.24■■■□□ 2.43
CBWD3-212ENST00000616550 RREB1Q92766 1687 aa30.23■■■□□ 2.43
CBWD3-212ENST00000616550 PER1O15534 1290 aaPredicted RBP30.23■■■□□ 2.43
CBWD3-212ENST00000616550 NBPF14Q5TI25 921 aa30.22■■■□□ 2.43
CBWD3-212ENST00000616550 EYA1Q99502 592 aa30.22■■■□□ 2.43
CBWD3-212ENST00000616550 RGPD3A6NKT7 1758 aaPredicted RBP30.22■■■□□ 2.43
CBWD3-212ENST00000616550 RGPD4Q7Z3J3 1758 aa30.22■■■□□ 2.43
CBWD3-212ENST00000616550 NHSQ6T4R5 1651 aa30.21■■■□□ 2.43
CBWD3-212ENST00000616550 EIF4A2Q14240 407 aaKnown RBP30.2■■■□□ 2.43
CBWD3-212ENST00000616550 R3HDM1Q15032 1099 aaKnown RBP30.2■■■□□ 2.43
CBWD3-212ENST00000616550 NUP188Q5SRE5 1749 aa30.19■■■□□ 2.42
CBWD3-212ENST00000616550 SHANK3Q9BYB0 1731 aa30.18■■■□□ 2.42
CBWD3-212ENST00000616550 CC2D1BQ5T0F9 858 aaKnown RBP30.17■■■□□ 2.42
CBWD3-212ENST00000616550 NCAPD2Q15021 1401 aa30.16■■■□□ 2.42
CBWD3-212ENST00000616550 PCDH11XQ9BZA7 1347 aa30.15■■■□□ 2.42
CBWD3-212ENST00000616550 PCDH11YQ9BZA8 1340 aa30.15■■■□□ 2.42
CBWD3-212ENST00000616550 PROM2Q8N271 834 aa30.14■■■□□ 2.42
CBWD3-212ENST00000616550 SYTL4Q96C24 671 aaPredicted RBP30.14■■■□□ 2.42
CBWD3-212ENST00000616550 TXNRD1Q16881 649 aa30.13■■■□□ 2.41
CBWD3-212ENST00000616550 BTAF1O14981 1849 aa30.12■■■□□ 2.41
CBWD3-212ENST00000616550 PRIM1P49642 420 aaKnown RBP30.12■■■□□ 2.41
CBWD3-212ENST00000616550 SPG7Q9UQ90 795 aa30.12■■■□□ 2.41
CBWD3-212ENST00000616550 NPC1L1Q9UHC9 1359 aa30.1■■■□□ 2.41
CBWD3-212ENST00000616550 CNGB1Q14028 1251 aaPredicted RBP30.09■■■□□ 2.41
CBWD3-212ENST00000616550 DOT1LQ8TEK3 1739 aa30.09■■■□□ 2.41
CBWD3-212ENST00000616550 IGSF1Q8N6C5 1336 aa30.08■■■□□ 2.41
CBWD3-212ENST00000616550 MTHFSP49914 203 aa30.08■■■□□ 2.41
CBWD3-212ENST00000616550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.08■■■□□ 2.41
CBWD3-212ENST00000616550 PKD1L3Q7Z443 1732 aa30.08■■■□□ 2.41
CBWD3-212ENST00000616550 CYP27B1O15528 508 aa30.07■■■□□ 2.4
CBWD3-212ENST00000616550 IL13P35225 146 aa30.02■■■□□ 2.4
CBWD3-212ENST00000616550 ANO8Q9HCE9 1232 aaPredicted RBP30.01■■■□□ 2.39
CBWD3-212ENST00000616550 STK32BQ9NY57 414 aa30.01■■■□□ 2.39
CBWD3-212ENST00000616550 PLEKHG2Q9H7P9 1386 aa30.01■■■□□ 2.39
CBWD3-212ENST00000616550 IFNL2Q8IZJ0 200 aa30■■■□□ 2.39
CBWD3-212ENST00000616550 NKX1-1Q15270 411 aaPredicted RBP29.99■■■□□ 2.39
CBWD3-212ENST00000616550 PLEKHO1Q53GL0 409 aaPredicted RBP29.98■■■□□ 2.39
CBWD3-212ENST00000616550 SLC27A3Q5K4L6 730 aa29.98■■■□□ 2.39
CBWD3-212ENST00000616550 SULT6B1Q6IMI4 303 aa29.98■■■□□ 2.39
CBWD3-212ENST00000616550 LRP5O75197 1615 aa29.97■■■□□ 2.39
CBWD3-212ENST00000616550 MPRIPQ6WCQ1 1025 aa29.97■■■□□ 2.39
CBWD3-212ENST00000616550 PHKG2P15735 406 aa29.96■■■□□ 2.39
CBWD3-212ENST00000616550 SLC15A2Q16348 729 aa29.96■■■□□ 2.39
CBWD3-212ENST00000616550 AEBP1Q8IUX7 1158 aa29.96■■■□□ 2.39
CBWD3-212ENST00000616550 DIAPH1O60610 1272 aaKnown RBP29.95■■■□□ 2.39
CBWD3-212ENST00000616550 AMOTQ4VCS5 1084 aa29.95■■■□□ 2.39
CBWD3-212ENST00000616550 LRRC4BQ9NT99 713 aa29.95■■■□□ 2.39
CBWD3-212ENST00000616550 ITGB4P16144 1822 aa29.94■■■□□ 2.38
CBWD3-212ENST00000616550 SRCAPQ6ZRS2 3230 aa29.92■■■□□ 2.38
CBWD3-212ENST00000616550 TOGARAM1Q9Y4F4 1720 aa29.91■■■□□ 2.38
CBWD3-212ENST00000616550 LY75O60449 1722 aa29.91■■■□□ 2.38
CBWD3-212ENST00000616550 KDRP35968 1356 aa29.9■■■□□ 2.38
CBWD3-212ENST00000616550 HSP90AB1P08238 724 aaKnown RBP29.9■■■□□ 2.38
CBWD3-212ENST00000616550 ZNF530Q6P9A1 599 aaPredicted RBP29.9■■■□□ 2.38
CBWD3-212ENST00000616550 CCNL1Q9UK58 526 aaPredicted RBP29.89■■■□□ 2.38
CBWD3-212ENST00000616550 KCNQ4P56696 695 aa29.88■■■□□ 2.37
CBWD3-212ENST00000616550 PIGBQ92521 554 aa29.88■■■□□ 2.37
CBWD3-212ENST00000616550 SMARCC1Q92922 1105 aaPredicted RBP29.88■■■□□ 2.37
CBWD3-212ENST00000616550 SPON1Q9HCB6 807 aa29.88■■■□□ 2.37
CBWD3-212ENST00000616550 TMOD3Q9NYL9 352 aa29.88■■■□□ 2.37
CBWD3-212ENST00000616550 PAPPAQ13219 1627 aa29.87■■■□□ 2.37
CBWD3-212ENST00000616550 C1orf141Q5JVX7 400 aa29.87■■■□□ 2.37
CBWD3-212ENST00000616550 HMOX1P09601 288 aa29.86■■■□□ 2.37
CBWD3-212ENST00000616550 DCAF5Q96JK2 942 aa29.86■■■□□ 2.37
CBWD3-212ENST00000616550 CFAP53Q96M91 514 aa29.85■■■□□ 2.37
CBWD3-212ENST00000616550 PDGFDQ9GZP0 370 aaPredicted RBP29.85■■■□□ 2.37
CBWD3-212ENST00000616550 PALLDQ8WX93 1383 aa29.85■■■□□ 2.37
CBWD3-212ENST00000616550 HMGB2P26583 209 aaKnown RBP29.84■■■□□ 2.37
CBWD3-212ENST00000616550 ZNF827Q17R98 1081 aa29.84■■■□□ 2.37
CBWD3-212ENST00000616550 CASZ1Q86V15 1759 aa29.83■■■□□ 2.37
CBWD3-212ENST00000616550 AKT1S1Q96B36 256 aa29.83■■■□□ 2.37
CBWD3-212ENST00000616550 ERVV-2B6SEH9 535 aa29.82■■■□□ 2.36
CBWD3-212ENST00000616550 U2SURPO15042 1029 aaKnown RBP29.82■■■□□ 2.36
CBWD3-212ENST00000616550 PPP2R1AP30153 589 aa29.82■■■□□ 2.36
CBWD3-212ENST00000616550 COL3A1P02461 1466 aaPredicted RBP29.81■■■□□ 2.36
CBWD3-212ENST00000616550 ZEB1P37275 1124 aaPredicted RBP29.8■■■□□ 2.36
CBWD3-212ENST00000616550 TFCP2L1Q9NZI6 479 aa29.8■■■□□ 2.36
CBWD3-212ENST00000616550 ZBTB7AO95365 584 aa29.79■■■□□ 2.36
CBWD3-212ENST00000616550 ASAP1Q9ULH1 1129 aa29.78■■■□□ 2.36
CBWD3-212ENST00000616550 PPP1R1BQ9UD71 204 aaPredicted RBP29.77■■■□□ 2.36
CBWD3-212ENST00000616550 CABP4P57796 275 aa29.76■■■□□ 2.35
CBWD3-212ENST00000616550 AKAP4Q5JQC9 854 aa29.76■■■□□ 2.35
CBWD3-212ENST00000616550 NUDCQ9Y266 331 aa29.76■■■□□ 2.35
CBWD3-212ENST00000616550 KDM6AO15550 1401 aaPredicted RBP29.75■■■□□ 2.35
CBWD3-212ENST00000616550 ATF5Q9Y2D1 282 aaPredicted RBP29.75■■■□□ 2.35
CBWD3-212ENST00000616550 MTFR1LQ9H019 292 aa29.74■■■□□ 2.35
CBWD3-212ENST00000616550 ATG3Q9NT62 314 aa29.74■■■□□ 2.35
CBWD3-212ENST00000616550 C5P01031 1676 aa29.73■■■□□ 2.35
CBWD3-212ENST00000616550 LOC102724428A0A0B4J2F2 783 aa29.73■■■□□ 2.35
CBWD3-212ENST00000616550 SIK1P57059 783 aa29.73■■■□□ 2.35
CBWD3-212ENST00000616550 DDX10Q13206 875 aaKnown RBP29.73■■■□□ 2.35
CBWD3-212ENST00000616550 QSER1Q2KHR3 1735 aa29.73■■■□□ 2.35
CBWD3-212ENST00000616550 TAF1LQ8IZX4 1826 aa29.72■■■□□ 2.35
CBWD3-212ENST00000616550 PNPLA7Q6ZV29 1317 aa29.71■■■□□ 2.35
CBWD3-212ENST00000616550 MTHFSDQ2M296 383 aaKnown RBP29.71■■■□□ 2.35
CBWD3-212ENST00000616550 TUBGCP6Q96RT7 1819 aa29.69■■■□□ 2.34
CBWD3-212ENST00000616550 NFATC2IPQ8NCF5 419 aa29.69■■■□□ 2.34
CBWD3-212ENST00000616550 SLC16A10Q8TF71 515 aa29.69■■■□□ 2.34
CBWD3-212ENST00000616550 SCN11AQ9UI33 1791 aa29.69■■■□□ 2.34
CBWD3-212ENST00000616550 ATP6V1AP38606 617 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms