RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
TCF4-248ENST00000616053 CAVIN4Q5BKX8 364 aa14.78□□□□□ -0.04
TCF4-248ENST00000616053 VPS36Q86VN1 386 aa14.78□□□□□ -0.04
TCF4-248ENST00000616053 CEP57L1Q8IYX8 460 aa14.78□□□□□ -0.04
TCF4-248ENST00000616053 HAUS7Q99871 368 aa14.77□□□□□ -0.04
TCF4-248ENST00000616053 MYL6BP14649 208 aa14.77□□□□□ -0.04
TCF4-248ENST00000616053 SLF2Q8IX21 1173 aa14.77□□□□□ -0.04
TCF4-248ENST00000616053 PPP1R14CQ8TAE6 165 aa14.77□□□□□ -0.04
TCF4-248ENST00000616053 DDX19BQ9UMR2 479 aa14.77□□□□□ -0.05
TCF4-248ENST00000616053 C6orf229H3BNL8 230 aa14.77□□□□□ -0.05
TCF4-248ENST00000616053 GIMAP7Q8NHV1 300 aa14.77□□□□□ -0.05
TCF4-248ENST00000616053 TSG101Q99816 390 aa14.77□□□□□ -0.05
TCF4-248ENST00000616053 CEP135Q66GS9 1140 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 APBB1IPQ7Z5R6 666 aaPredicted RBP14.76□□□□□ -0.05
TCF4-248ENST00000616053 KIF7Q2M1P5 1343 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 SURF6O75683 361 aaKnown RBP14.76□□□□□ -0.05
TCF4-248ENST00000616053 LMOD1P29536 600 aaPredicted RBP14.76□□□□□ -0.05
TCF4-248ENST00000616053 TNNT1P13805 278 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 TMCO5BA8MYB1 307 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 CETN1Q12798 172 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 CCDC30Q5VVM6 783 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 SIRT1Q96EB6 747 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 KIF4AO95239 1232 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 CABP5Q9NP86 173 aa14.76□□□□□ -0.05
TCF4-248ENST00000616053 DHX8Q14562 1220 aaKnown RBP14.76□□□□□ -0.05
TCF4-248ENST00000616053 USP8P40818 1118 aa14.75□□□□□ -0.05
TCF4-248ENST00000616053 SIL1Q9H173 461 aa14.75□□□□□ -0.05
TCF4-248ENST00000616053 STARD3NLO95772 234 aa14.75□□□□□ -0.05
TCF4-248ENST00000616053 SPOUT1Q5T280 376 aaKnown RBP14.75□□□□□ -0.05
TCF4-248ENST00000616053 PSMC4P43686 418 aa14.74□□□□□ -0.05
TCF4-248ENST00000616053 ATP2B3Q16720 1220 aa14.74□□□□□ -0.05
TCF4-248ENST00000616053 CDKL5O76039 1030 aa14.74□□□□□ -0.05
TCF4-248ENST00000616053 PLS1Q14651 629 aa14.74□□□□□ -0.05
TCF4-248ENST00000616053 CACYBPQ9HB71 228 aaKnown RBP14.74□□□□□ -0.05
TCF4-248ENST00000616053 PDCP20941 246 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
TCF4-248ENST00000616053 NLRP5P59047 1200 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 GSE1Q14687 1217 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 FAM177A1Q8N128 213 aaPredicted RBP14.73□□□□□ -0.05
TCF4-248ENST00000616053 IKBKGQ9Y6K9 419 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 GNAI1P63096 354 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 NBPF8Q3BBV2 869 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 NBPF14Q5TI25 921 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 SYCP3Q8IZU3 236 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 CCDC14Q49A88 953 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 LRRCC1Q9C099 1032 aa14.73□□□□□ -0.05
TCF4-248ENST00000616053 CCDC178Q5BJE1 867 aa14.72□□□□□ -0.05
TCF4-248ENST00000616053 RAB34Q9BZG1 259 aa14.72□□□□□ -0.05
TCF4-248ENST00000616053 GCOM1H8Y6P7 765 aaPredicted RBP14.72□□□□□ -0.05
TCF4-248ENST00000616053 MYZAPP0CAP1 466 aa14.72□□□□□ -0.05
TCF4-248ENST00000616053 ME1P48163 572 aa14.72□□□□□ -0.05
TCF4-248ENST00000616053 CACNA2D4Q7Z3S7 1137 aa14.72□□□□□ -0.05
TCF4-248ENST00000616053 IDH1O75874 414 aaKnown RBP14.72□□□□□ -0.05
TCF4-248ENST00000616053 ST20-MTHFSA0A0A6YYL1 179 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 FSD2A1L4K1 749 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 MTHFSP49914 203 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
TCF4-248ENST00000616053 SEPT6Q14141 434 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 B4DLN1 442 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 MRPL12P52815 198 aaKnown RBP14.71□□□□□ -0.05
TCF4-248ENST00000616053 GAS2L2Q8NHY3 880 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 STK3Q13188 491 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 TMEM266Q2M3C6 531 aa14.71□□□□□ -0.05
TCF4-248ENST00000616053 BAG4O95429 457 aaKnown RBP14.71□□□□□ -0.06
TCF4-248ENST00000616053 IFFO1Q0D2I5 559 aa14.71□□□□□ -0.06
TCF4-248ENST00000616053 CUL4BQ13620 913 aa14.71□□□□□ -0.06
TCF4-248ENST00000616053 CCDC174Q6PII3 467 aa14.71□□□□□ -0.06
TCF4-248ENST00000616053 SATB1Q01826 763 aa14.71□□□□□ -0.06
TCF4-248ENST00000616053 AIDAQ96BJ3 306 aa14.71□□□□□ -0.06
TCF4-248ENST00000616053 SEPT10Q9P0V9 454 aa14.71□□□□□ -0.06
TCF4-248ENST00000616053 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 CCDC39Q9UFE4 941 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 SPTY2D1Q68D10 685 aaPredicted RBP14.7□□□□□ -0.06
TCF4-248ENST00000616053 SMC1BQ8NDV3 1235 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 ZNF408Q9H9D4 720 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 WWC3Q9ULE0 1092 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 PHLDB1Q86UU1 1377 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 MINDY4BA8MYZ0 360 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 PFDN4Q9NQP4 134 aa14.7□□□□□ -0.06
TCF4-248ENST00000616053 KIF5CO60282 957 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 HDAC9Q9UKV0 1011 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 DPH6Q7L8W6 267 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 NLRP13Q86W25 1043 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 WASF1Q92558 559 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 SPA17Q15506 151 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 CFAP58Q5T655 872 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 COG6Q9Y2V7 657 aa14.69□□□□□ -0.06
TCF4-248ENST00000616053 PHACTR2O75167 634 aa14.68□□□□□ -0.06
TCF4-248ENST00000616053 TPD52P55327 224 aaPredicted RBP14.68□□□□□ -0.06
TCF4-248ENST00000616053 TAOK3Q9H2K8 898 aa14.68□□□□□ -0.06
TCF4-248ENST00000616053 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
TCF4-248ENST00000616053 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
TCF4-248ENST00000616053 FKBP15Q5T1M5 1219 aa14.68□□□□□ -0.06
TCF4-248ENST00000616053 STXBP4Q6ZWJ1 553 aa14.68□□□□□ -0.06
TCF4-248ENST00000616053 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.68□□□□□ -0.06
TCF4-248ENST00000616053 XRCC6P12956 609 aaKnown RBP eCLIP14.68□□□□□ -0.06
TCF4-248ENST00000616053 STK25O00506 426 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms