RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 KDF1Q8NAX2 398 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 ARTNQ5T4W7 220 aa6.82□□□□□ -1.32
HMGB1P24-202ENST00000615653 RIPOR1Q6ZS17 1223 aa6.82□□□□□ -1.32
HMGB1P24-202ENST00000615653 C1orf229Q6ZS94 237 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P24-202ENST00000615653 PRICKLE2Q7Z3G6 844 aa6.82□□□□□ -1.32
HMGB1P24-202ENST00000615653 ZFP64Q9NPA5 681 aa6.82□□□□□ -1.32
HMGB1P24-202ENST00000615653 RNF144AP50876 292 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P24-202ENST00000615653 RRAGCQ9HB90 399 aa6.81□□□□□ -1.32
HMGB1P24-202ENST00000615653 DYRK1BQ9Y463 629 aa6.8□□□□□ -1.32
HMGB1P24-202ENST00000615653 PIK3R2O00459 728 aa6.79□□□□□ -1.32
HMGB1P24-202ENST00000615653 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
HMGB1P24-202ENST00000615653 HAP1P54257 671 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P24-202ENST00000615653 DIXDC1Q155Q3 683 aa6.79□□□□□ -1.32
HMGB1P24-202ENST00000615653 EDARADDQ8WWZ3 215 aa6.79□□□□□ -1.32
HMGB1P24-202ENST00000615653 SLC10A4Q96EP9 437 aa6.79□□□□□ -1.32
HMGB1P24-202ENST00000615653 TBC1D2Q9BYX2 928 aa6.79□□□□□ -1.32
HMGB1P24-202ENST00000615653 LILRA1O75019 489 aa6.78□□□□□ -1.32
HMGB1P24-202ENST00000615653 CABLES1Q8TDN4 633 aa6.78□□□□□ -1.32
HMGB1P24-202ENST00000615653 KLRG1Q96E93 195 aa6.78□□□□□ -1.32
HMGB1P24-202ENST00000615653 GDF2Q9UK05 429 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P24-202ENST00000615653 GNB5O14775 395 aa6.77□□□□□ -1.33
HMGB1P24-202ENST00000615653 LCE1DQ5T752 114 aa6.77□□□□□ -1.33
HMGB1P24-202ENST00000615653 ZNF784Q8NCA9 323 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P24-202ENST00000615653 TMPRSS4Q9NRS4 437 aa6.77□□□□□ -1.33
HMGB1P24-202ENST00000615653 RSPO4Q2I0M5 234 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P24-202ENST00000615653 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
HMGB1P24-202ENST00000615653 NBPF11Q86T75 865 aa6.76□□□□□ -1.33
HMGB1P24-202ENST00000615653 BEGAINQ9BUH8 593 aa6.76□□□□□ -1.33
HMGB1P24-202ENST00000615653 CFHR5Q9BXR6 569 aa6.76□□□□□ -1.33
HMGB1P24-202ENST00000615653 GAS2L1Q99501 681 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P24-202ENST00000615653 ARHGAP9Q9BRR9 750 aa6.75□□□□□ -1.33
HMGB1P24-202ENST00000615653 NOP53Q9NZM5 478 aaKnown RBP6.75□□□□□ -1.33
HMGB1P24-202ENST00000615653 GPC1P35052 558 aa6.74□□□□□ -1.33
HMGB1P24-202ENST00000615653 GATA4P43694 442 aa6.74□□□□□ -1.33
HMGB1P24-202ENST00000615653 NKAPLQ5M9Q1 402 aa6.74□□□□□ -1.33
HMGB1P24-202ENST00000615653 GOLGA6L1Q8N7Z2 621 aa6.74□□□□□ -1.33
HMGB1P24-202ENST00000615653 VSIG10Q8N0Z9 540 aa6.73□□□□□ -1.33
HMGB1P24-202ENST00000615653 TSC1Q92574 1164 aa6.73□□□□□ -1.33
HMGB1P24-202ENST00000615653 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
HMGB1P24-202ENST00000615653 KDM2AQ9Y2K7 1162 aa6.73□□□□□ -1.33
HMGB1P24-202ENST00000615653 RIC3Q7Z5B4 369 aa6.72□□□□□ -1.33
HMGB1P24-202ENST00000615653 ZBTB33Q86T24 672 aa6.72□□□□□ -1.33
HMGB1P24-202ENST00000615653 AMPD1P23109 780 aa6.71□□□□□ -1.34
HMGB1P24-202ENST00000615653 BTBD6Q96KE9 485 aa6.71□□□□□ -1.34
HMGB1P24-202ENST00000615653 ERVH48-1M5A8F1 160 aa6.7□□□□□ -1.34
HMGB1P24-202ENST00000615653 DGKGP49619 791 aa6.7□□□□□ -1.34
HMGB1P24-202ENST00000615653 POU4F2Q12837 409 aa6.7□□□□□ -1.34
HMGB1P24-202ENST00000615653 GIGYF2Q6Y7W6 1299 aaKnown RBP6.7□□□□□ -1.34
HMGB1P24-202ENST00000615653 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
HMGB1P24-202ENST00000615653 ARID1BQ8NFD5 2236 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 F11P03951 625 aa6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 THBS1P07996 1170 aa6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 TTLL12Q14166 644 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 CSPP1Q1MSJ5 1256 aa6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 WDR44Q5JSH3 913 aa6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 HELBQ8NG08 1087 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 PHF24Q9UPV7 400 aa6.69□□□□□ -1.34
HMGB1P24-202ENST00000615653 DYRK3O43781 588 aa6.68□□□□□ -1.34
HMGB1P24-202ENST00000615653 AMHR2Q16671 573 aa6.68□□□□□ -1.34
HMGB1P24-202ENST00000615653 TUSC1Q2TAM9 212 aa6.68□□□□□ -1.34
HMGB1P24-202ENST00000615653 NBPF20Q3BBV1 942 aa6.68□□□□□ -1.34
HMGB1P24-202ENST00000615653 OCSTAMPQ9BR26 566 aa6.68□□□□□ -1.34
HMGB1P24-202ENST00000615653 NUTM2BA6NNL0 878 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 NUTM2EB1AL46 878 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 LILRB3O75022 631 aa6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 QPCTQ16769 361 aa6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 NUTM2DQ5VT03 806 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 NBPF10Q6P3W6 841 aaKnown RBP6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 NUTM2AQ8IVF1 878 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 NBPF15Q8N660 670 aa6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 FKBPLQ9UIM3 349 aa6.67□□□□□ -1.34
HMGB1P24-202ENST00000615653 SPATA31C2B4DYI2 1134 aa6.66□□□□□ -1.34
HMGB1P24-202ENST00000615653 EPXP11678 715 aa6.66□□□□□ -1.34
HMGB1P24-202ENST00000615653 LRP8Q14114 963 aa6.66□□□□□ -1.34
HMGB1P24-202ENST00000615653 GRIP2Q9C0E4 1043 aa6.66□□□□□ -1.34
HMGB1P24-202ENST00000615653 GGA1Q9UJY5 639 aa6.66□□□□□ -1.34
HMGB1P24-202ENST00000615653 ZC3H4Q9UPT8 1303 aaKnown RBP6.66□□□□□ -1.34
HMGB1P24-202ENST00000615653 ESPNB1AK53 854 aa6.65□□□□□ -1.34
HMGB1P24-202ENST00000615653 C2CD2LO14523 706 aa6.65□□□□□ -1.34
HMGB1P24-202ENST00000615653 UBAP2LQ14157 1087 aaKnown RBP6.65□□□□□ -1.34
HMGB1P24-202ENST00000615653 TIMMDC1Q9NPL8 285 aa6.65□□□□□ -1.34
HMGB1P24-202ENST00000615653 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
HMGB1P24-202ENST00000615653 ATP5J2-PTCD1G3V325 749 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 MEN1O00255 615 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 RAB15P59190 212 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 PTK2Q05397 1052 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 PRSS36Q5K4E3 855 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 ADAM32Q8TC27 787 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 LIMD1Q9UGP4 676 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 GPSM3Q9Y4H4 160 aa6.64□□□□□ -1.35
HMGB1P24-202ENST00000615653 A0A1W2PRU2 124 aa6.63□□□□□ -1.35
HMGB1P24-202ENST00000615653 COBLO75128 1261 aa6.63□□□□□ -1.35
HMGB1P24-202ENST00000615653 BMP4P12644 408 aa6.63□□□□□ -1.35
HMGB1P24-202ENST00000615653 SLC27A3Q5K4L6 730 aa6.63□□□□□ -1.35
HMGB1P24-202ENST00000615653 TRIM52Q96A61 297 aa6.63□□□□□ -1.35
HMGB1P24-202ENST00000615653 CYLDQ9NQC7 956 aa6.63□□□□□ -1.35
HMGB1P24-202ENST00000615653 TULP1O00294 542 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P24-202ENST00000615653 HYAL3O43820 417 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P24-202ENST00000615653 SPATA31C1P0DKV0 1188 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms