RNA–Protein interactions for RNA: ENST00000615008.4

TMEM230-211, Transcript of transmembrane protein 230, humanhuman

TSL 4 BASIC

Gene TMEM230, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM230-211ENST00000615008 PCDH11XQ9BZA7 1347 aa17.7■□□□□ 0.42
TMEM230-211ENST00000615008 PCDH11YQ9BZA8 1340 aa17.7■□□□□ 0.42
TMEM230-211ENST00000615008 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
TMEM230-211ENST00000615008 EN1Q05925 392 aaPredicted RBP17.68■□□□□ 0.42
TMEM230-211ENST00000615008 TNS1Q9HBL0 1735 aaKnown RBP17.68■□□□□ 0.42
TMEM230-211ENST00000615008 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
TMEM230-211ENST00000615008 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
TMEM230-211ENST00000615008 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
TMEM230-211ENST00000615008 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
TMEM230-211ENST00000615008 SBF2Q86WG5 1849 aa17.66■□□□□ 0.42
TMEM230-211ENST00000615008 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
TMEM230-211ENST00000615008 IL13P35225 146 aa17.66■□□□□ 0.42
TMEM230-211ENST00000615008 SULT6B1Q6IMI4 303 aa17.66■□□□□ 0.42
TMEM230-211ENST00000615008 BCL9O00512 1426 aa17.65■□□□□ 0.42
TMEM230-211ENST00000615008 NCAPD2Q15021 1401 aa17.65■□□□□ 0.42
TMEM230-211ENST00000615008 PPP2R1AP30153 589 aa17.65■□□□□ 0.42
TMEM230-211ENST00000615008 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
TMEM230-211ENST00000615008 PLEKHO1Q53GL0 409 aaPredicted RBP17.64■□□□□ 0.41
TMEM230-211ENST00000615008 HMOX1P09601 288 aa17.63■□□□□ 0.41
TMEM230-211ENST00000615008 EZH2Q15910 746 aaKnown RBP17.63■□□□□ 0.41
TMEM230-211ENST00000615008 SHANK3Q9BYB0 1731 aa17.63■□□□□ 0.41
TMEM230-211ENST00000615008 NHSQ6T4R5 1651 aa17.62■□□□□ 0.41
TMEM230-211ENST00000615008 PKD1L3Q7Z443 1732 aa17.62■□□□□ 0.41
TMEM230-211ENST00000615008 KCNQ2O43526 872 aa17.62■□□□□ 0.41
TMEM230-211ENST00000615008 RALBP1Q15311 655 aa17.62■□□□□ 0.41
TMEM230-211ENST00000615008 AEBP1Q8IUX7 1158 aa17.62■□□□□ 0.41
TMEM230-211ENST00000615008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.41
TMEM230-211ENST00000615008 DOT1LQ8TEK3 1739 aa17.61■□□□□ 0.41
TMEM230-211ENST00000615008 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
TMEM230-211ENST00000615008 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
TMEM230-211ENST00000615008 ZNF530Q6P9A1 599 aaPredicted RBP17.61■□□□□ 0.41
TMEM230-211ENST00000615008 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
TMEM230-211ENST00000615008 PARD3Q8TEW0 1356 aa17.61■□□□□ 0.41
TMEM230-211ENST00000615008 PLEKHG2Q9H7P9 1386 aa17.6■□□□□ 0.41
TMEM230-211ENST00000615008 CYP27B1O15528 508 aa17.59■□□□□ 0.41
TMEM230-211ENST00000615008 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
TMEM230-211ENST00000615008 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
TMEM230-211ENST00000615008 CAMKK2Q96RR4 588 aa17.59■□□□□ 0.41
TMEM230-211ENST00000615008 COL3A1P02461 1466 aaPredicted RBP17.58■□□□□ 0.41
TMEM230-211ENST00000615008 PLSCR1O15162 318 aa17.58■□□□□ 0.4
TMEM230-211ENST00000615008 KDRP35968 1356 aa17.57■□□□□ 0.4
TMEM230-211ENST00000615008 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
TMEM230-211ENST00000615008 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
TMEM230-211ENST00000615008 PHKG2P15735 406 aa17.57■□□□□ 0.4
TMEM230-211ENST00000615008 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
TMEM230-211ENST00000615008 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
TMEM230-211ENST00000615008 BTAF1O14981 1849 aa17.56■□□□□ 0.4
TMEM230-211ENST00000615008 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
TMEM230-211ENST00000615008 NEFMP07197 916 aa17.55■□□□□ 0.4
TMEM230-211ENST00000615008 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
TMEM230-211ENST00000615008 RGPD3A6NKT7 1758 aaPredicted RBP17.55■□□□□ 0.4
TMEM230-211ENST00000615008 RGPD4Q7Z3J3 1758 aa17.55■□□□□ 0.4
TMEM230-211ENST00000615008 TMOD3Q9NYL9 352 aa17.54■□□□□ 0.4
TMEM230-211ENST00000615008 RREB1Q92766 1687 aa17.53■□□□□ 0.4
TMEM230-211ENST00000615008 TXNRD1Q16881 649 aa17.53■□□□□ 0.4
TMEM230-211ENST00000615008 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
TMEM230-211ENST00000615008 DCAF5Q96JK2 942 aa17.52■□□□□ 0.4
TMEM230-211ENST00000615008 PSDA5PKW4 1024 aaPredicted RBP17.51■□□□□ 0.39
TMEM230-211ENST00000615008 PRKAR2BP31323 418 aa17.51■□□□□ 0.39
TMEM230-211ENST00000615008 AKAP4Q5JQC9 854 aa17.51■□□□□ 0.39
TMEM230-211ENST00000615008 NUP188Q5SRE5 1749 aa17.51■□□□□ 0.39
TMEM230-211ENST00000615008 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
TMEM230-211ENST00000615008 R3HDM1Q15032 1099 aaKnown RBP17.5■□□□□ 0.39
TMEM230-211ENST00000615008 TOGARAM1Q9Y4F4 1720 aa17.5■□□□□ 0.39
TMEM230-211ENST00000615008 ITGB4P16144 1822 aa17.49■□□□□ 0.39
TMEM230-211ENST00000615008 CABP4P57796 275 aa17.49■□□□□ 0.39
TMEM230-211ENST00000615008 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
TMEM230-211ENST00000615008 PRKRIP1Q9H875 184 aaPredicted RBP17.49■□□□□ 0.39
TMEM230-211ENST00000615008 STK32BQ9NY57 414 aa17.49■□□□□ 0.39
TMEM230-211ENST00000615008 ANP32CO43423 234 aa17.48■□□□□ 0.39
TMEM230-211ENST00000615008 MTHFSDQ2M296 383 aaKnown RBP17.48■□□□□ 0.39
TMEM230-211ENST00000615008 SLC27A3Q5K4L6 730 aa17.48■□□□□ 0.39
TMEM230-211ENST00000615008 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
TMEM230-211ENST00000615008 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
TMEM230-211ENST00000615008 FCHSD2O94868 740 aa17.47■□□□□ 0.39
TMEM230-211ENST00000615008 WDR43Q15061 677 aaKnown RBP eCLIP17.47■□□□□ 0.39
TMEM230-211ENST00000615008 PIGBQ92521 554 aa17.47■□□□□ 0.39
TMEM230-211ENST00000615008 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
TMEM230-211ENST00000615008 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
TMEM230-211ENST00000615008 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
TMEM230-211ENST00000615008 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.38
TMEM230-211ENST00000615008 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
TMEM230-211ENST00000615008 PROM2Q8N271 834 aa17.45■□□□□ 0.38
TMEM230-211ENST00000615008 KDM6AO15550 1401 aaPredicted RBP17.45■□□□□ 0.38
TMEM230-211ENST00000615008 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
TMEM230-211ENST00000615008 GNAT3A8MTJ3 354 aa17.44■□□□□ 0.38
TMEM230-211ENST00000615008 RNMTO43148 476 aaKnown RBP17.43■□□□□ 0.38
TMEM230-211ENST00000615008 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
TMEM230-211ENST00000615008 ANO8Q9HCE9 1232 aaPredicted RBP17.43■□□□□ 0.38
TMEM230-211ENST00000615008 LY75O60449 1722 aa17.42■□□□□ 0.38
TMEM230-211ENST00000615008 KCNQ4P56696 695 aa17.42■□□□□ 0.38
TMEM230-211ENST00000615008 TEFQ10587 303 aa17.42■□□□□ 0.38
TMEM230-211ENST00000615008 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
TMEM230-211ENST00000615008 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
TMEM230-211ENST00000615008 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
TMEM230-211ENST00000615008 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
TMEM230-211ENST00000615008 SLC15A2Q16348 729 aa17.41■□□□□ 0.38
TMEM230-211ENST00000615008 NFATC2IPQ8NCF5 419 aa17.41■□□□□ 0.38
TMEM230-211ENST00000615008 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
TMEM230-211ENST00000615008 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms