RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
SNX9-202ENST00000614703 IP6K1Q92551 441 aa13.72□□□□□ -0.21
SNX9-202ENST00000614703 USP47Q96K76 1375 aa13.71□□□□□ -0.21
SNX9-202ENST00000614703 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.21
SNX9-202ENST00000614703 DOT1LQ8TEK3 1739 aa13.71□□□□□ -0.21
SNX9-202ENST00000614703 NME9Q86XW9 330 aa13.71□□□□□ -0.21
SNX9-202ENST00000614703 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
SNX9-202ENST00000614703 EDC4Q6P2E9 1401 aaKnown RBP13.71□□□□□ -0.22
SNX9-202ENST00000614703 ZCRB1Q8TBF4 217 aaKnown RBP13.7□□□□□ -0.22
SNX9-202ENST00000614703 L3MBTL2Q969R5 705 aa13.7□□□□□ -0.22
SNX9-202ENST00000614703 COL23A1Q86Y22 540 aaPredicted RBP13.69□□□□□ -0.22
SNX9-202ENST00000614703 TMC1Q8TDI8 760 aa13.69□□□□□ -0.22
SNX9-202ENST00000614703 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
SNX9-202ENST00000614703 KCNQ4P56696 695 aa13.68□□□□□ -0.22
SNX9-202ENST00000614703 ADCY9O60503 1353 aa13.68□□□□□ -0.22
SNX9-202ENST00000614703 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
SNX9-202ENST00000614703 NSD2O96028 1365 aa13.67□□□□□ -0.22
SNX9-202ENST00000614703 C5P01031 1676 aa13.66□□□□□ -0.22
SNX9-202ENST00000614703 NSD3Q9BZ95 1437 aa13.66□□□□□ -0.22
SNX9-202ENST00000614703 CD163L1Q9NR16 1453 aa13.66□□□□□ -0.22
SNX9-202ENST00000614703 AMPHP49418 695 aa13.65□□□□□ -0.22
SNX9-202ENST00000614703 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
SNX9-202ENST00000614703 ZNF526Q8TF50 670 aaPredicted RBP13.65□□□□□ -0.22
SNX9-202ENST00000614703 PUS7Q96PZ0 661 aaKnown RBP13.65□□□□□ -0.22
SNX9-202ENST00000614703 APLP1P51693 650 aa13.64□□□□□ -0.23
SNX9-202ENST00000614703 COG3Q96JB2 828 aa13.64□□□□□ -0.23
SNX9-202ENST00000614703 HOXC9P31274 260 aa13.63□□□□□ -0.23
SNX9-202ENST00000614703 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
SNX9-202ENST00000614703 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
SNX9-202ENST00000614703 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
SNX9-202ENST00000614703 TAF1LQ8IZX4 1826 aa13.62□□□□□ -0.23
SNX9-202ENST00000614703 A0A1W2PP64 1363 aa13.62□□□□□ -0.23
SNX9-202ENST00000614703 RTL1A6NKG5 1358 aa13.62□□□□□ -0.23
SNX9-202ENST00000614703 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
SNX9-202ENST00000614703 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
SNX9-202ENST00000614703 AK7Q96M32 723 aa13.62□□□□□ -0.23
SNX9-202ENST00000614703 IGSF1Q8N6C5 1336 aa13.62□□□□□ -0.23
SNX9-202ENST00000614703 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
SNX9-202ENST00000614703 PCDH11XQ9BZA7 1347 aa13.61□□□□□ -0.23
SNX9-202ENST00000614703 PCDH11YQ9BZA8 1340 aa13.61□□□□□ -0.23
SNX9-202ENST00000614703 RGPD2P0DJD1 1756 aa13.6□□□□□ -0.23
SNX9-202ENST00000614703 PALLDQ8WX93 1383 aa13.6□□□□□ -0.23
SNX9-202ENST00000614703 MEGF6O75095 1541 aa13.6□□□□□ -0.23
SNX9-202ENST00000614703 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
SNX9-202ENST00000614703 CARD11Q9BXL7 1154 aa13.6□□□□□ -0.23
SNX9-202ENST00000614703 KIF3CO14782 793 aa13.59□□□□□ -0.23
SNX9-202ENST00000614703 TOMM70O94826 608 aa13.59□□□□□ -0.23
SNX9-202ENST00000614703 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
SNX9-202ENST00000614703 SSFA2P28290 1259 aa13.58□□□□□ -0.24
SNX9-202ENST00000614703 MPRIPQ6WCQ1 1025 aa13.58□□□□□ -0.24
SNX9-202ENST00000614703 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
SNX9-202ENST00000614703 CICQ96RK0 1608 aaPredicted RBP13.57□□□□□ -0.24
SNX9-202ENST00000614703 NEUROD1Q13562 356 aa13.56□□□□□ -0.24
SNX9-202ENST00000614703 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
SNX9-202ENST00000614703 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
SNX9-202ENST00000614703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.55□□□□□ -0.24
SNX9-202ENST00000614703 SIN3AQ96ST3 1273 aa13.55□□□□□ -0.24
SNX9-202ENST00000614703 ITGB4P16144 1822 aa13.55□□□□□ -0.24
SNX9-202ENST00000614703 PHF14O94880 888 aa13.54□□□□□ -0.24
SNX9-202ENST00000614703 TGFB2P61812 414 aa13.54□□□□□ -0.24
SNX9-202ENST00000614703 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
SNX9-202ENST00000614703 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
SNX9-202ENST00000614703 DNAJC5GQ8N7S2 189 aa13.53□□□□□ -0.24
SNX9-202ENST00000614703 USHBP1Q8N6Y0 703 aa13.52□□□□□ -0.25
SNX9-202ENST00000614703 WWC3Q9ULE0 1092 aa13.52□□□□□ -0.25
SNX9-202ENST00000614703 INSRP06213 1382 aa13.52□□□□□ -0.25
SNX9-202ENST00000614703 TOGARAM1Q9Y4F4 1720 aa13.52□□□□□ -0.25
SNX9-202ENST00000614703 FLT4P35916 1363 aa13.51□□□□□ -0.25
SNX9-202ENST00000614703 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
SNX9-202ENST00000614703 RBM46Q8TBY0 533 aaKnown RBP13.51□□□□□ -0.25
SNX9-202ENST00000614703 KIF13BQ9NQT8 1826 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 CYP27B1O15528 508 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 FBLN1P23142 703 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 SIK1P57059 783 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 NLGN1Q8N2Q7 840 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
SNX9-202ENST00000614703 GNPATO15228 680 aa13.49□□□□□ -0.25
SNX9-202ENST00000614703 MMP10P09238 476 aa13.49□□□□□ -0.25
SNX9-202ENST00000614703 FSTL1Q12841 308 aa13.49□□□□□ -0.25
SNX9-202ENST00000614703 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
SNX9-202ENST00000614703 PIGBQ92521 554 aa13.49□□□□□ -0.25
SNX9-202ENST00000614703 TMOD3Q9NYL9 352 aa13.49□□□□□ -0.25
SNX9-202ENST00000614703 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
SNX9-202ENST00000614703 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
SNX9-202ENST00000614703 ARHGAP27Q6ZUM4 889 aa13.48□□□□□ -0.25
SNX9-202ENST00000614703 KLRG1Q96E93 195 aa13.48□□□□□ -0.25
SNX9-202ENST00000614703 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
SNX9-202ENST00000614703 PXDNLA1KZ92 1463 aa13.48□□□□□ -0.25
SNX9-202ENST00000614703 KDM2BQ8NHM5 1336 aa13.47□□□□□ -0.25
SNX9-202ENST00000614703 FYB1O15117 783 aa13.47□□□□□ -0.25
SNX9-202ENST00000614703 ATP6V1AP38606 617 aa13.47□□□□□ -0.25
SNX9-202ENST00000614703 TMF1P82094 1093 aa13.47□□□□□ -0.25
SNX9-202ENST00000614703 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
SNX9-202ENST00000614703 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
SNX9-202ENST00000614703 AMIGO3Q86WK7 504 aa13.47□□□□□ -0.25
SNX9-202ENST00000614703 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms