RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 SHANK3Q9BYB0 1731 aa32.67■■■□□ 2.82
TPI1-210ENST00000613953 PDGFDQ9GZP0 370 aaPredicted RBP32.67■■■□□ 2.82
TPI1-210ENST00000613953 PAPPAQ13219 1627 aa32.65■■■□□ 2.82
TPI1-210ENST00000613953 HSPA5P11021 654 aaKnown RBP32.65■■■□□ 2.82
TPI1-210ENST00000613953 POLR3GLQ9BT43 218 aa32.65■■■□□ 2.82
TPI1-210ENST00000613953 EMILIN1Q9Y6C2 1016 aa32.65■■■□□ 2.82
TPI1-210ENST00000613953 RAPGEF4Q8WZA2 1011 aa32.64■■■□□ 2.82
TPI1-210ENST00000613953 PPP1R1BQ9UD71 204 aaPredicted RBP32.63■■■□□ 2.81
TPI1-210ENST00000613953 DOT1LQ8TEK3 1739 aa32.61■■■□□ 2.81
TPI1-210ENST00000613953 ANKRD26Q9UPS8 1709 aa32.61■■■□□ 2.81
TPI1-210ENST00000613953 PRIM1P49642 420 aaKnown RBP32.6■■■□□ 2.81
TPI1-210ENST00000613953 SYTL4Q96C24 671 aaPredicted RBP32.6■■■□□ 2.81
TPI1-210ENST00000613953 ZBTB7AO95365 584 aa32.59■■■□□ 2.81
TPI1-210ENST00000613953 TATP17735 454 aaPredicted RBP32.59■■■□□ 2.81
TPI1-210ENST00000613953 LRRC4BQ9NT99 713 aa32.59■■■□□ 2.81
TPI1-210ENST00000613953 KAT6BQ8WYB5 2073 aa32.59■■■□□ 2.81
TPI1-210ENST00000613953 NSD2O96028 1365 aa32.58■■■□□ 2.81
TPI1-210ENST00000613953 PPM1GO15355 546 aaPredicted RBP32.56■■■□□ 2.8
TPI1-210ENST00000613953 SLC27A3Q5K4L6 730 aa32.56■■■□□ 2.8
TPI1-210ENST00000613953 WASHC2AQ641Q2 1341 aa32.55■■■□□ 2.8
TPI1-210ENST00000613953 NCAPD2Q15021 1401 aa32.55■■■□□ 2.8
TPI1-210ENST00000613953 PCDH11XQ9BZA7 1347 aa32.54■■■□□ 2.8
TPI1-210ENST00000613953 PCDH11YQ9BZA8 1340 aa32.54■■■□□ 2.8
TPI1-210ENST00000613953 ZNF827Q17R98 1081 aa32.54■■■□□ 2.8
TPI1-210ENST00000613953 PTGER2P43116 358 aa32.53■■■□□ 2.8
TPI1-210ENST00000613953 POLKQ9UBT6 870 aa32.51■■■□□ 2.79
TPI1-210ENST00000613953 ATF5Q9Y2D1 282 aaPredicted RBP32.51■■■□□ 2.79
TPI1-210ENST00000613953 MTFR1LQ9H019 292 aa32.5■■■□□ 2.79
TPI1-210ENST00000613953 PANK3Q9H999 370 aa32.5■■■□□ 2.79
TPI1-210ENST00000613953 AKT1S1Q96B36 256 aa32.48■■■□□ 2.79
TPI1-210ENST00000613953 MAP2P11137 1827 aaKnown RBP32.47■■■□□ 2.79
TPI1-210ENST00000613953 LY75O60449 1722 aa32.47■■■□□ 2.79
TPI1-210ENST00000613953 PKD1L3Q7Z443 1732 aa32.46■■■□□ 2.79
TPI1-210ENST00000613953 CYP27B1O15528 508 aa32.46■■■□□ 2.79
TPI1-210ENST00000613953 TNNT2P45379 298 aaPredicted RBP32.45■■■□□ 2.79
TPI1-210ENST00000613953 KCNQ4P56696 695 aa32.44■■■□□ 2.78
TPI1-210ENST00000613953 EYA1Q99502 592 aa32.44■■■□□ 2.78
TPI1-210ENST00000613953 SGIP1Q9BQI5 828 aa32.43■■■□□ 2.78
TPI1-210ENST00000613953 CCNL1Q9UK58 526 aaPredicted RBP32.42■■■□□ 2.78
TPI1-210ENST00000613953 QSER1Q2KHR3 1735 aa32.41■■■□□ 2.78
TPI1-210ENST00000613953 EIF4A2Q14240 407 aaKnown RBP32.39■■■□□ 2.78
TPI1-210ENST00000613953 SPG7Q9UQ90 795 aa32.39■■■□□ 2.78
TPI1-210ENST00000613953 PNPLA7Q6ZV29 1317 aa32.38■■■□□ 2.77
TPI1-210ENST00000613953 TFCP2L1Q9NZI6 479 aa32.38■■■□□ 2.77
TPI1-210ENST00000613953 TOGARAM1Q9Y4F4 1720 aa32.37■■■□□ 2.77
TPI1-210ENST00000613953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.37■■■□□ 2.77
TPI1-210ENST00000613953 NKX1-1Q15270 411 aaPredicted RBP32.35■■■□□ 2.77
TPI1-210ENST00000613953 MPRIPQ6WCQ1 1025 aa32.35■■■□□ 2.77
TPI1-210ENST00000613953 SLC16A10Q8TF71 515 aa32.35■■■□□ 2.77
TPI1-210ENST00000613953 UTRNP46939 3433 aa32.35■■■□□ 2.77
TPI1-210ENST00000613953 DCAF8L1A6NGE4 600 aa32.35■■■□□ 2.77
TPI1-210ENST00000613953 FHDC1Q9C0D6 1143 aaPredicted RBP32.35■■■□□ 2.77
TPI1-210ENST00000613953 PALLDQ8WX93 1383 aa32.34■■■□□ 2.77
TPI1-210ENST00000613953 PLEKHG2Q9H7P9 1386 aa32.33■■■□□ 2.77
TPI1-210ENST00000613953 TUBGCP6Q96RT7 1819 aa32.33■■■□□ 2.77
TPI1-210ENST00000613953 ARXQ96QS3 562 aa32.32■■■□□ 2.76
TPI1-210ENST00000613953 IGSF1Q8N6C5 1336 aa32.31■■■□□ 2.76
TPI1-210ENST00000613953 MORC1Q86VD1 984 aa32.31■■■□□ 2.76
TPI1-210ENST00000613953 SYT17Q9BSW7 474 aa32.31■■■□□ 2.76
TPI1-210ENST00000613953 KNSTRNQ9Y448 316 aa32.31■■■□□ 2.76
TPI1-210ENST00000613953 KIF7Q2M1P5 1343 aa32.31■■■□□ 2.76
TPI1-210ENST00000613953 ITGB4P16144 1822 aa32.28■■■□□ 2.76
TPI1-210ENST00000613953 MAP3K5Q99683 1374 aa32.28■■■□□ 2.76
TPI1-210ENST00000613953 PIGBQ92521 554 aa32.28■■■□□ 2.76
TPI1-210ENST00000613953 SMARCC1Q92922 1105 aaPredicted RBP32.28■■■□□ 2.76
TPI1-210ENST00000613953 C5P01031 1676 aa32.27■■■□□ 2.76
TPI1-210ENST00000613953 PHKG2P15735 406 aa32.27■■■□□ 2.76
TPI1-210ENST00000613953 HMGB2P26583 209 aaKnown RBP32.27■■■□□ 2.76
TPI1-210ENST00000613953 IFNL2Q8IZJ0 200 aa32.27■■■□□ 2.76
TPI1-210ENST00000613953 COL24A1Q17RW2 1714 aa32.26■■■□□ 2.75
TPI1-210ENST00000613953 POLD1P28340 1107 aa32.23■■■□□ 2.75
TPI1-210ENST00000613953 AMER1Q5JTC6 1135 aaPredicted RBP32.23■■■□□ 2.75
TPI1-210ENST00000613953 YY1P25490 414 aa32.22■■■□□ 2.75
TPI1-210ENST00000613953 TMOD3Q9NYL9 352 aa32.22■■■□□ 2.75
TPI1-210ENST00000613953 COL23A1Q86Y22 540 aaPredicted RBP32.21■■■□□ 2.75
TPI1-210ENST00000613953 TAF1LQ8IZX4 1826 aa32.2■■■□□ 2.75
TPI1-210ENST00000613953 GOLGB1Q14789 3259 aaKnown RBP32.19■■■□□ 2.74
TPI1-210ENST00000613953 MSH5O43196 834 aa32.18■■■□□ 2.74
TPI1-210ENST00000613953 C4BP0C0L5 1744 aa32.17■■■□□ 2.74
TPI1-210ENST00000613953 FLAD1Q8NFF5 587 aa32.16■■■□□ 2.74
TPI1-210ENST00000613953 LOC102724428A0A0B4J2F2 783 aa32.15■■■□□ 2.74
TPI1-210ENST00000613953 SIK1P57059 783 aa32.15■■■□□ 2.74
TPI1-210ENST00000613953 PLEKHO1Q53GL0 409 aaPredicted RBP32.15■■■□□ 2.74
TPI1-210ENST00000613953 AEBP1Q8IUX7 1158 aa32.15■■■□□ 2.74
TPI1-210ENST00000613953 ASAP1Q9ULH1 1129 aa32.15■■■□□ 2.74
TPI1-210ENST00000613953 HSP90AB1P08238 724 aaKnown RBP32.13■■■□□ 2.73
TPI1-210ENST00000613953 AMOTQ4VCS5 1084 aa32.13■■■□□ 2.73
TPI1-210ENST00000613953 AK7Q96M32 723 aa32.13■■■□□ 2.73
TPI1-210ENST00000613953 PER1O15534 1290 aaPredicted RBP32.12■■■□□ 2.73
TPI1-210ENST00000613953 DCAF5Q96JK2 942 aa32.12■■■□□ 2.73
TPI1-210ENST00000613953 KDRP35968 1356 aa32.12■■■□□ 2.73
TPI1-210ENST00000613953 ERVV-2B6SEH9 535 aa32.11■■■□□ 2.73
TPI1-210ENST00000613953 IL13P35225 146 aa32.11■■■□□ 2.73
TPI1-210ENST00000613953 ZNF530Q6P9A1 599 aaPredicted RBP32.11■■■□□ 2.73
TPI1-210ENST00000613953 KLHL34Q8N239 644 aa32.11■■■□□ 2.73
TPI1-210ENST00000613953 ATG3Q9NT62 314 aa32.1■■■□□ 2.73
TPI1-210ENST00000613953 SULT6B1Q6IMI4 303 aa32.1■■■□□ 2.73
TPI1-210ENST00000613953 KDM6AO15550 1401 aaPredicted RBP32.09■■■□□ 2.73
TPI1-210ENST00000613953 MSL1Q68DK7 614 aa32.09■■■□□ 2.73
TPI1-210ENST00000613953 AMIGO3Q86WK7 504 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms