RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 NLRP13Q86W25 1043 aa6.75□□□□□ -1.33
SYCP1-209ENST00000613524 STAC3Q96MF2 364 aa6.75□□□□□ -1.33
SYCP1-209ENST00000613524 TTC21BQ7Z4L5 1316 aa6.75□□□□□ -1.33
SYCP1-209ENST00000613524 ARHGEF28Q8N1W1 1705 aaKnown RBP6.74□□□□□ -1.33
SYCP1-209ENST00000613524 SYTL4Q96C24 671 aaPredicted RBP6.74□□□□□ -1.33
SYCP1-209ENST00000613524 QRICH2Q9H0J4 1663 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 ATP7BP35670 1465 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 COG3Q96JB2 828 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 AXIN2Q9Y2T1 843 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 TECPR2O15040 1411 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 A0A1W2PP64 1363 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 TRPM1Q7Z4N2 1603 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 MCM6Q14566 821 aa6.74□□□□□ -1.33
SYCP1-209ENST00000613524 TULP4Q9NRJ4 1543 aa6.73□□□□□ -1.33
SYCP1-209ENST00000613524 SPATA31A6Q5VVP1 1343 aa6.73□□□□□ -1.33
SYCP1-209ENST00000613524 FAM161AQ3B820 660 aa6.73□□□□□ -1.33
SYCP1-209ENST00000613524 ZNF772Q68DY9 489 aaPredicted RBP6.73□□□□□ -1.33
SYCP1-209ENST00000613524 RGS22Q8NE09 1264 aa6.73□□□□□ -1.33
SYCP1-209ENST00000613524 DDX54Q8TDD1 881 aaKnown RBP6.73□□□□□ -1.33
SYCP1-209ENST00000613524 EMILIN1Q9Y6C2 1016 aa6.73□□□□□ -1.33
SYCP1-209ENST00000613524 TNS3Q68CZ2 1445 aa6.73□□□□□ -1.33
SYCP1-209ENST00000613524 RALGAPBQ86X10 1494 aa6.73□□□□□ -1.33
SYCP1-209ENST00000613524 DCCP43146 1447 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 ACSBG1Q96GR2 724 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 CARD14Q9BXL6 1004 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 CRISPLD2Q9H0B8 497 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 COL16A1Q07092 1604 aaPredicted RBP6.72□□□□□ -1.33
SYCP1-209ENST00000613524 DEFB132Q7Z7B7 95 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 SEPT12Q8IYM1 358 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 PROCA1Q8NCQ7 364 aaPredicted RBP6.72□□□□□ -1.33
SYCP1-209ENST00000613524 SIRT1Q96EB6 747 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 TRPC5Q9UL62 973 aaPredicted RBP6.72□□□□□ -1.33
SYCP1-209ENST00000613524 KNSTRNQ9Y448 316 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 IQSEC2Q5JU85 1478 aa6.72□□□□□ -1.33
SYCP1-209ENST00000613524 UNC5CLQ8IV45 518 aa6.71□□□□□ -1.33
SYCP1-209ENST00000613524 LAMC1P11047 1609 aa6.71□□□□□ -1.33
SYCP1-209ENST00000613524 KIF7Q2M1P5 1343 aa6.71□□□□□ -1.33
SYCP1-209ENST00000613524 CDC42BPGQ6DT37 1551 aa6.71□□□□□ -1.34
SYCP1-209ENST00000613524 ATAD2Q6PL18 1390 aa6.71□□□□□ -1.34
SYCP1-209ENST00000613524 HSP90AB2PQ58FF8 381 aa6.71□□□□□ -1.34
SYCP1-209ENST00000613524 GJD4Q96KN9 370 aaPredicted RBP6.71□□□□□ -1.34
SYCP1-209ENST00000613524 NSD3Q9BZ95 1437 aa6.71□□□□□ -1.34
SYCP1-209ENST00000613524 NCOA3Q9Y6Q9 1424 aa6.71□□□□□ -1.34
SYCP1-209ENST00000613524 PRIM1P49642 420 aaKnown RBP6.71□□□□□ -1.34
SYCP1-209ENST00000613524 PDE3BQ13370 1112 aa6.71□□□□□ -1.34
SYCP1-209ENST00000613524 MORC1Q86VD1 984 aa6.71□□□□□ -1.34
SYCP1-209ENST00000613524 YTHDC1Q96MU7 727 aaKnown RBP6.71□□□□□ -1.34
SYCP1-209ENST00000613524 PXDNQ92626 1479 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 USP32Q8NFA0 1604 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 KCNQ4P56696 695 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 RBM6P78332 1123 aaKnown RBP6.7□□□□□ -1.34
SYCP1-209ENST00000613524 POLR3EQ9NVU0 708 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 FMN2Q9NZ56 1722 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 CLSPNQ9HAW4 1339 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 ARHGEF10O15013 1369 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 USP6P35125 1406 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 U2SURPO15042 1029 aaKnown RBP6.7□□□□□ -1.34
SYCP1-209ENST00000613524 FYB1O15117 783 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 MAP3K13O43283 966 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 TRIM37O94972 964 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 MFAP1P55081 439 aaKnown RBP6.7□□□□□ -1.34
SYCP1-209ENST00000613524 CDCA8Q53HL2 280 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 TRPC6Q9Y210 931 aa6.7□□□□□ -1.34
SYCP1-209ENST00000613524 WASHC2AQ641Q2 1341 aa6.69□□□□□ -1.34
SYCP1-209ENST00000613524 ANKRD24Q8TF21 1146 aa6.69□□□□□ -1.34
SYCP1-209ENST00000613524 HMOX1P09601 288 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 CHRDL2Q6WN34 429 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 DLC1Q96QB1 1528 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 PSDA5PKW4 1024 aaPredicted RBP6.68□□□□□ -1.34
SYCP1-209ENST00000613524 PTF1AQ7RTS3 328 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 PHOX2BQ99453 314 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 MAP3K19Q56UN5 1328 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 ANKARQ7Z5J8 1434 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 DDX12PQ92771 950 aa6.68□□□□□ -1.34
SYCP1-209ENST00000613524 SALL2Q9Y467 1007 aaPredicted RBP6.68□□□□□ -1.34
SYCP1-209ENST00000613524 SF3B2Q13435 895 aaKnown RBP6.67□□□□□ -1.34
SYCP1-209ENST00000613524 SMYD5Q6GMV2 418 aa6.67□□□□□ -1.34
SYCP1-209ENST00000613524 GIGYF2Q6Y7W6 1299 aaKnown RBP6.67□□□□□ -1.34
SYCP1-209ENST00000613524 ZNF467Q7Z7K2 595 aaPredicted RBP6.67□□□□□ -1.34
SYCP1-209ENST00000613524 RBM42Q9BTD8 480 aaKnown RBP6.67□□□□□ -1.34
SYCP1-209ENST00000613524 KNDC1Q76NI1 1749 aa6.67□□□□□ -1.34
SYCP1-209ENST00000613524 SOCS7O14512 581 aa6.67□□□□□ -1.34
SYCP1-209ENST00000613524 SBNO2Q9Y2G9 1366 aa6.67□□□□□ -1.34
SYCP1-209ENST00000613524 AHDC1Q5TGY3 1603 aaPredicted RBP6.67□□□□□ -1.34
SYCP1-209ENST00000613524 CGNL1Q0VF96 1302 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 LHX8Q68G74 356 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 KRT27Q7Z3Y8 459 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 EN1Q05925 392 aaPredicted RBP6.66□□□□□ -1.34
SYCP1-209ENST00000613524 DSG2Q14126 1118 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 TMCO4Q5TGY1 634 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 FNBP4Q8N3X1 1017 aaPredicted RBP6.66□□□□□ -1.34
SYCP1-209ENST00000613524 SNRKQ9NRH2 765 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 WWC3Q9ULE0 1092 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 NHSL1Q5SYE7 1610 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 BCL9LQ86UU0 1499 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 SBNO1A3KN83 1393 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 IRF6O14896 467 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 DDB1Q16531 1140 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 KCNH5Q8NCM2 988 aa6.66□□□□□ -1.34
SYCP1-209ENST00000613524 SPDYE1Q8NFV5 336 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms