RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
LTBP4-233ENST00000612121 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
LTBP4-233ENST00000612121 SLC12A5Q9H2X9 1139 aa22.11■■□□□ 1.13
LTBP4-233ENST00000612121 DOT1LQ8TEK3 1739 aa22.11■■□□□ 1.13
LTBP4-233ENST00000612121 FAM208AQ9UK61 1670 aaKnown RBP22.11■■□□□ 1.13
LTBP4-233ENST00000612121 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
LTBP4-233ENST00000612121 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
LTBP4-233ENST00000612121 CCNL1Q9UK58 526 aaPredicted RBP22.09■■□□□ 1.13
LTBP4-233ENST00000612121 ATP10DQ9P241 1426 aa22.07■■□□□ 1.12
LTBP4-233ENST00000612121 A0A1W2PP64 1363 aa22.07■■□□□ 1.12
LTBP4-233ENST00000612121 MSH5O43196 834 aa22.06■■□□□ 1.12
LTBP4-233ENST00000612121 ZCRB1Q8TBF4 217 aaKnown RBP22.06■■□□□ 1.12
LTBP4-233ENST00000612121 TERF2IPQ9NYB0 399 aa22.05■■□□□ 1.12
LTBP4-233ENST00000612121 MSL1Q68DK7 614 aa22.04■■□□□ 1.12
LTBP4-233ENST00000612121 RGPD2P0DJD1 1756 aa22.03■■□□□ 1.12
LTBP4-233ENST00000612121 MEGF6O75095 1541 aa22.03■■□□□ 1.12
LTBP4-233ENST00000612121 HOXC9P31274 260 aa22.03■■□□□ 1.12
LTBP4-233ENST00000612121 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
LTBP4-233ENST00000612121 MAP3K19Q56UN5 1328 aa22.03■■□□□ 1.12
LTBP4-233ENST00000612121 USP47Q96K76 1375 aa22.02■■□□□ 1.12
LTBP4-233ENST00000612121 CD2APQ9Y5K6 639 aa22.02■■□□□ 1.12
LTBP4-233ENST00000612121 GPBP1L1Q9HC44 474 aaPredicted RBP22.01■■□□□ 1.11
LTBP4-233ENST00000612121 ADCY9O60503 1353 aa22■■□□□ 1.11
LTBP4-233ENST00000612121 FBLN1P23142 703 aa22■■□□□ 1.11
LTBP4-233ENST00000612121 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
LTBP4-233ENST00000612121 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
LTBP4-233ENST00000612121 HSPA6P17066 643 aa21.98■■□□□ 1.11
LTBP4-233ENST00000612121 AMPHP49418 695 aa21.98■■□□□ 1.11
LTBP4-233ENST00000612121 C5P01031 1676 aa21.98■■□□□ 1.11
LTBP4-233ENST00000612121 COG3Q96JB2 828 aa21.97■■□□□ 1.11
LTBP4-233ENST00000612121 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
LTBP4-233ENST00000612121 FLAD1Q8NFF5 587 aa21.96■■□□□ 1.11
LTBP4-233ENST00000612121 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
LTBP4-233ENST00000612121 TAF1LQ8IZX4 1826 aa21.95■■□□□ 1.1
LTBP4-233ENST00000612121 CGNL1Q0VF96 1302 aa21.95■■□□□ 1.1
LTBP4-233ENST00000612121 ZNF526Q8TF50 670 aaPredicted RBP21.94■■□□□ 1.1
LTBP4-233ENST00000612121 HMGB2P26583 209 aaKnown RBP21.93■■□□□ 1.1
LTBP4-233ENST00000612121 RTL1A6NKG5 1358 aa21.92■■□□□ 1.1
LTBP4-233ENST00000612121 PALLDQ8WX93 1383 aa21.92■■□□□ 1.1
LTBP4-233ENST00000612121 USHBP1Q8N6Y0 703 aa21.92■■□□□ 1.1
LTBP4-233ENST00000612121 RRS1Q15050 365 aaKnown RBP21.9■■□□□ 1.1
LTBP4-233ENST00000612121 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
LTBP4-233ENST00000612121 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
LTBP4-233ENST00000612121 C4BP0C0L5 1744 aa21.89■■□□□ 1.1
LTBP4-233ENST00000612121 IGSF1Q8N6C5 1336 aa21.89■■□□□ 1.1
LTBP4-233ENST00000612121 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.09
LTBP4-233ENST00000612121 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
LTBP4-233ENST00000612121 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
LTBP4-233ENST00000612121 PCDH11XQ9BZA7 1347 aa21.87■■□□□ 1.09
LTBP4-233ENST00000612121 PCDH11YQ9BZA8 1340 aa21.87■■□□□ 1.09
LTBP4-233ENST00000612121 TESK2Q96S53 571 aa21.87■■□□□ 1.09
LTBP4-233ENST00000612121 UBR3Q6ZT12 1888 aa21.86■■□□□ 1.09
LTBP4-233ENST00000612121 KIF3CO14782 793 aa21.86■■□□□ 1.09
LTBP4-233ENST00000612121 AK7Q96M32 723 aa21.86■■□□□ 1.09
LTBP4-233ENST00000612121 WWC3Q9ULE0 1092 aa21.86■■□□□ 1.09
LTBP4-233ENST00000612121 CYP27B1O15528 508 aa21.85■■□□□ 1.09
LTBP4-233ENST00000612121 SMIM5Q71RC9 77 aa21.85■■□□□ 1.09
LTBP4-233ENST00000612121 SMG6Q86US8 1419 aaKnown RBP21.85■■□□□ 1.09
LTBP4-233ENST00000612121 SMARCC1Q92922 1105 aaPredicted RBP21.84■■□□□ 1.09
LTBP4-233ENST00000612121 ITGB4P16144 1822 aa21.84■■□□□ 1.09
LTBP4-233ENST00000612121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.83■■□□□ 1.09
LTBP4-233ENST00000612121 FYB1O15117 783 aa21.83■■□□□ 1.09
LTBP4-233ENST00000612121 PHF14O94880 888 aa21.83■■□□□ 1.09
LTBP4-233ENST00000612121 HSP90AB2PQ58FF8 381 aa21.83■■□□□ 1.09
LTBP4-233ENST00000612121 GGNBP2Q9H3C7 697 aa21.82■■□□□ 1.08
LTBP4-233ENST00000612121 INSRP06213 1382 aa21.82■■□□□ 1.08
LTBP4-233ENST00000612121 NSD3Q9BZ95 1437 aa21.81■■□□□ 1.08
LTBP4-233ENST00000612121 ST20-MTHFSA0A0A6YYL1 179 aa21.81■■□□□ 1.08
LTBP4-233ENST00000612121 PIGBQ92521 554 aa21.81■■□□□ 1.08
LTBP4-233ENST00000612121 SSFA2P28290 1259 aa21.8■■□□□ 1.08
LTBP4-233ENST00000612121 MAP2P11137 1827 aaKnown RBP21.8■■□□□ 1.08
LTBP4-233ENST00000612121 CICQ96RK0 1608 aaPredicted RBP21.8■■□□□ 1.08
LTBP4-233ENST00000612121 LINC00116Q8NCU8 138 aa21.79■■□□□ 1.08
LTBP4-233ENST00000612121 FLT4P35916 1363 aa21.77■■□□□ 1.08
LTBP4-233ENST00000612121 SLC24A1O60721 1099 aa21.77■■□□□ 1.08
LTBP4-233ENST00000612121 APLP1P51693 650 aa21.77■■□□□ 1.08
LTBP4-233ENST00000612121 NKX1-1Q15270 411 aaPredicted RBP21.77■■□□□ 1.08
LTBP4-233ENST00000612121 PKD1L3Q7Z443 1732 aa21.77■■□□□ 1.08
LTBP4-233ENST00000612121 KIF24Q5T7B8 1368 aa21.76■■□□□ 1.07
LTBP4-233ENST00000612121 LOC102724428A0A0B4J2F2 783 aa21.76■■□□□ 1.07
LTBP4-233ENST00000612121 SIK1P57059 783 aa21.76■■□□□ 1.07
LTBP4-233ENST00000612121 DNAJC5GQ8N7S2 189 aa21.76■■□□□ 1.07
LTBP4-233ENST00000612121 PXDNLA1KZ92 1463 aa21.73■■□□□ 1.07
LTBP4-233ENST00000612121 KIAA1551Q9HCM1 1747 aa21.73■■□□□ 1.07
LTBP4-233ENST00000612121 TOMM70O94826 608 aa21.73■■□□□ 1.07
LTBP4-233ENST00000612121 ITPK1Q13572 414 aa21.73■■□□□ 1.07
LTBP4-233ENST00000612121 KIF13BQ9NQT8 1826 aa21.73■■□□□ 1.07
LTBP4-233ENST00000612121 TONSLQ96HA7 1378 aa21.73■■□□□ 1.07
LTBP4-233ENST00000612121 NCAPD2Q15021 1401 aa21.72■■□□□ 1.07
LTBP4-233ENST00000612121 GNPATO15228 680 aa21.72■■□□□ 1.07
LTBP4-233ENST00000612121 MMP10P09238 476 aa21.72■■□□□ 1.07
LTBP4-233ENST00000612121 ASAP1Q9ULH1 1129 aa21.71■■□□□ 1.07
LTBP4-233ENST00000612121 TGFB2P61812 414 aa21.7■■□□□ 1.06
LTBP4-233ENST00000612121 SPG7Q9UQ90 795 aa21.7■■□□□ 1.06
LTBP4-233ENST00000612121 KIF20BQ96Q89 1820 aa21.7■■□□□ 1.06
LTBP4-233ENST00000612121 N4BP2Q86UW6 1770 aaPredicted RBP21.69■■□□□ 1.06
LTBP4-233ENST00000612121 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
LTBP4-233ENST00000612121 TMOD3Q9NYL9 352 aa21.69■■□□□ 1.06
LTBP4-233ENST00000612121 EMILIN1Q9Y6C2 1016 aa21.69■■□□□ 1.06
LTBP4-233ENST00000612121 A0A0G2JLW4 131 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms