RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
CLK4-215ENST00000611733 GLI3P10071 1580 aa15.97■□□□□ 0.15
CLK4-215ENST00000611733 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
CLK4-215ENST00000611733 THRAP3Q9Y2W1 955 aaKnown RBP15.97■□□□□ 0.15
CLK4-215ENST00000611733 DISP2A7MBM2 1401 aa15.97■□□□□ 0.15
CLK4-215ENST00000611733 YTHDC1Q96MU7 727 aaKnown RBP15.96■□□□□ 0.15
CLK4-215ENST00000611733 MAPK8IP3Q9UPT6 1336 aa15.96■□□□□ 0.15
CLK4-215ENST00000611733 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.14
CLK4-215ENST00000611733 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
CLK4-215ENST00000611733 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
CLK4-215ENST00000611733 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
CLK4-215ENST00000611733 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
CLK4-215ENST00000611733 CYP27B1O15528 508 aa15.93■□□□□ 0.14
CLK4-215ENST00000611733 NFE2L2Q16236 605 aa15.93■□□□□ 0.14
CLK4-215ENST00000611733 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
CLK4-215ENST00000611733 A0A0G2JS52 829 aa15.93■□□□□ 0.14
CLK4-215ENST00000611733 ONECUT3O60422 494 aaPredicted RBP15.93■□□□□ 0.14
CLK4-215ENST00000611733 NEFMP07197 916 aa15.93■□□□□ 0.14
CLK4-215ENST00000611733 RIPK4P57078 832 aa15.93■□□□□ 0.14
CLK4-215ENST00000611733 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLK4-215ENST00000611733 MYT1Q01538 1121 aa15.93■□□□□ 0.14
CLK4-215ENST00000611733 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
CLK4-215ENST00000611733 EXOC5O00471 708 aa15.92■□□□□ 0.14
CLK4-215ENST00000611733 RBM6P78332 1123 aaKnown RBP15.92■□□□□ 0.14
CLK4-215ENST00000611733 AMOTQ4VCS5 1084 aa15.92■□□□□ 0.14
CLK4-215ENST00000611733 DCTN1Q14203 1278 aa15.92■□□□□ 0.14
CLK4-215ENST00000611733 SEPT12Q8IYM1 358 aa15.92■□□□□ 0.14
CLK4-215ENST00000611733 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
CLK4-215ENST00000611733 RXRBP28702 533 aa15.91■□□□□ 0.14
CLK4-215ENST00000611733 DDB1Q16531 1140 aa15.91■□□□□ 0.14
CLK4-215ENST00000611733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.91■□□□□ 0.147e-7■■■■□ 25.1
CLK4-215ENST00000611733 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
CLK4-215ENST00000611733 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
CLK4-215ENST00000611733 CDCA7Q9BWT1 371 aaPredicted RBP15.9■□□□□ 0.14
CLK4-215ENST00000611733 PHKG2P15735 406 aa15.9■□□□□ 0.14
CLK4-215ENST00000611733 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
CLK4-215ENST00000611733 LGR6Q9HBX8 967 aa15.9■□□□□ 0.14
CLK4-215ENST00000611733 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
CLK4-215ENST00000611733 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
CLK4-215ENST00000611733 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.13
CLK4-215ENST00000611733 MCM10Q7L590 875 aa15.89■□□□□ 0.13
CLK4-215ENST00000611733 PARP4Q9UKK3 1724 aaKnown RBP15.88■□□□□ 0.13
CLK4-215ENST00000611733 WNK3Q9BYP7 1800 aa15.88■□□□□ 0.13
CLK4-215ENST00000611733 AKAP4Q5JQC9 854 aa15.88■□□□□ 0.13
CLK4-215ENST00000611733 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
CLK4-215ENST00000611733 IL17REQ8NFR9 667 aa15.88■□□□□ 0.13
CLK4-215ENST00000611733 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
CLK4-215ENST00000611733 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
CLK4-215ENST00000611733 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
CLK4-215ENST00000611733 PKD1L3Q7Z443 1732 aa15.87■□□□□ 0.13
CLK4-215ENST00000611733 PCDH11XQ9BZA7 1347 aa15.87■□□□□ 0.13
CLK4-215ENST00000611733 PCDH11YQ9BZA8 1340 aa15.87■□□□□ 0.13
CLK4-215ENST00000611733 SHANK3Q9BYB0 1731 aa15.87■□□□□ 0.13
CLK4-215ENST00000611733 LRRC37A3O60309 1634 aa15.86■□□□□ 0.13
CLK4-215ENST00000611733 WWC1Q8IX03 1113 aa15.86■□□□□ 0.13
CLK4-215ENST00000611733 TNS2Q63HR2 1409 aa15.86■□□□□ 0.13
CLK4-215ENST00000611733 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
CLK4-215ENST00000611733 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
CLK4-215ENST00000611733 DLG5Q8TDM6 1919 aa15.84■□□□□ 0.13
CLK4-215ENST00000611733 KDM6AO15550 1401 aaPredicted RBP15.84■□□□□ 0.13
CLK4-215ENST00000611733 PLEKHG2Q9H7P9 1386 aa15.84■□□□□ 0.13
CLK4-215ENST00000611733 RNMTO43148 476 aaKnown RBP15.84■□□□□ 0.13
CLK4-215ENST00000611733 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
CLK4-215ENST00000611733 ZNF521Q96K83 1311 aa15.83■□□□□ 0.13
CLK4-215ENST00000611733 RTF1Q92541 710 aaKnown RBP15.83■□□□□ 0.13
CLK4-215ENST00000611733 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.13
CLK4-215ENST00000611733 RGS12O14924 1447 aa15.83■□□□□ 0.12
CLK4-215ENST00000611733 CCDC27Q2M243 656 aa15.83■□□□□ 0.12
CLK4-215ENST00000611733 HTATSF1O43719 755 aaKnown RBP15.82■□□□□ 0.12
CLK4-215ENST00000611733 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
CLK4-215ENST00000611733 ACSBG1Q96GR2 724 aa15.82■□□□□ 0.12
CLK4-215ENST00000611733 DCAF5Q96JK2 942 aa15.82■□□□□ 0.12
CLK4-215ENST00000611733 KRT27Q7Z3Y8 459 aa15.81■□□□□ 0.12
CLK4-215ENST00000611733 MIS18AQ9NYP9 233 aa15.81■□□□□ 0.12
CLK4-215ENST00000611733 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
CLK4-215ENST00000611733 CEMIPQ8WUJ3 1361 aa15.8■□□□□ 0.12
CLK4-215ENST00000611733 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
CLK4-215ENST00000611733 PTF1AQ7RTS3 328 aa15.8■□□□□ 0.12
CLK4-215ENST00000611733 NFATC2IPQ8NCF5 419 aa15.8■□□□□ 0.12
CLK4-215ENST00000611733 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
CLK4-215ENST00000611733 ZBED9Q6R2W3 1325 aa15.79■□□□□ 0.12
CLK4-215ENST00000611733 KCNQ2O43526 872 aa15.79■□□□□ 0.12
CLK4-215ENST00000611733 HSP90AB1P08238 724 aaKnown RBP15.79■□□□□ 0.12
CLK4-215ENST00000611733 LAS1LQ9Y4W2 734 aaKnown RBP15.79■□□□□ 0.12
CLK4-215ENST00000611733 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
CLK4-215ENST00000611733 NGEFQ8N5V2 710 aa15.79■□□□□ 0.12
CLK4-215ENST00000611733 WDR63Q8IWG1 891 aa15.77■□□□□ 0.12
CLK4-215ENST00000611733 CABP4P57796 275 aa15.77■□□□□ 0.11
CLK4-215ENST00000611733 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.11
CLK4-215ENST00000611733 SLC52A2Q9HAB3 445 aa15.77■□□□□ 0.11
CLK4-215ENST00000611733 TEFQ10587 303 aa15.76■□□□□ 0.11
CLK4-215ENST00000611733 TOGARAM1Q9Y4F4 1720 aa15.76■□□□□ 0.11
CLK4-215ENST00000611733 ERVV-2B6SEH9 535 aa15.76■□□□□ 0.11
CLK4-215ENST00000611733 KCNQ3O43525 872 aa15.76■□□□□ 0.11
CLK4-215ENST00000611733 GOLGA2Q08379 1002 aa15.76■□□□□ 0.11
CLK4-215ENST00000611733 TAF7Q15545 349 aaPredicted RBP15.76■□□□□ 0.11
CLK4-215ENST00000611733 PIGBQ92521 554 aa15.76■□□□□ 0.11
CLK4-215ENST00000611733 TSR2Q969E8 191 aaKnown RBP15.76■□□□□ 0.11
CLK4-215ENST00000611733 ADAMTS7Q9UKP4 1686 aa15.76■□□□□ 0.11
CLK4-215ENST00000611733 ZNF853P0CG23 659 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms