RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 PROM2Q8N271 834 aa26.37■■□□□ 1.81
TCF3-219ENST00000610756 MEGF6O75095 1541 aa26.36■■□□□ 1.81
TCF3-219ENST00000610756 EYA1Q99502 592 aa26.36■■□□□ 1.81
TCF3-219ENST00000610756 RGPD2P0DJD1 1756 aa26.34■■□□□ 1.81
TCF3-219ENST00000610756 MAP2P11137 1827 aaKnown RBP26.34■■□□□ 1.81
TCF3-219ENST00000610756 EIF4A2Q14240 407 aaKnown RBP26.34■■□□□ 1.81
TCF3-219ENST00000610756 ANKRD26Q9UPS8 1709 aa26.32■■□□□ 1.8
TCF3-219ENST00000610756 NCAPD2Q15021 1401 aa26.31■■□□□ 1.8
TCF3-219ENST00000610756 TXNRD1Q16881 649 aa26.3■■□□□ 1.8
TCF3-219ENST00000610756 PRIM1P49642 420 aaKnown RBP26.29■■□□□ 1.8
TCF3-219ENST00000610756 RREB1Q92766 1687 aa26.28■■□□□ 1.8
TCF3-219ENST00000610756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.28■■□□□ 1.8
TCF3-219ENST00000610756 PCDH11XQ9BZA7 1347 aa26.27■■□□□ 1.8
TCF3-219ENST00000610756 PCDH11YQ9BZA8 1340 aa26.27■■□□□ 1.8
TCF3-219ENST00000610756 RGPD3A6NKT7 1758 aaPredicted RBP26.27■■□□□ 1.8
TCF3-219ENST00000610756 RGPD4Q7Z3J3 1758 aa26.27■■□□□ 1.8
TCF3-219ENST00000610756 NHSQ6T4R5 1651 aa26.26■■□□□ 1.79
TCF3-219ENST00000610756 NPC1L1Q9UHC9 1359 aa26.25■■□□□ 1.79
TCF3-219ENST00000610756 CYP27B1O15528 508 aa26.25■■□□□ 1.79
TCF3-219ENST00000610756 SPG7Q9UQ90 795 aa26.25■■□□□ 1.79
TCF3-219ENST00000610756 IGSF1Q8N6C5 1336 aa26.24■■□□□ 1.79
TCF3-219ENST00000610756 CC2D1BQ5T0F9 858 aaKnown RBP26.24■■□□□ 1.79
TCF3-219ENST00000610756 SYTL4Q96C24 671 aaPredicted RBP26.24■■□□□ 1.79
TCF3-219ENST00000610756 NUP188Q5SRE5 1749 aa26.23■■□□□ 1.79
TCF3-219ENST00000610756 MTHFSP49914 203 aa26.21■■□□□ 1.79
TCF3-219ENST00000610756 NKX1-1Q15270 411 aaPredicted RBP26.21■■□□□ 1.79
TCF3-219ENST00000610756 ANO8Q9HCE9 1232 aaPredicted RBP26.2■■□□□ 1.79
TCF3-219ENST00000610756 PLEKHG2Q9H7P9 1386 aa26.2■■□□□ 1.78
TCF3-219ENST00000610756 SHANK3Q9BYB0 1731 aa26.19■■□□□ 1.78
TCF3-219ENST00000610756 IL13P35225 146 aa26.18■■□□□ 1.78
TCF3-219ENST00000610756 SLC27A3Q5K4L6 730 aa26.18■■□□□ 1.78
TCF3-219ENST00000610756 KAT6BQ8WYB5 2073 aa26.18■■□□□ 1.78
TCF3-219ENST00000610756 SLC15A2Q16348 729 aa26.17■■□□□ 1.78
TCF3-219ENST00000610756 STK32BQ9NY57 414 aa26.17■■□□□ 1.78
TCF3-219ENST00000610756 IFNL2Q8IZJ0 200 aa26.16■■□□□ 1.78
TCF3-219ENST00000610756 LRRC4BQ9NT99 713 aa26.16■■□□□ 1.78
TCF3-219ENST00000610756 BTAF1O14981 1849 aa26.15■■□□□ 1.78
TCF3-219ENST00000610756 PHKG2P15735 406 aa26.14■■□□□ 1.77
TCF3-219ENST00000610756 AMOTQ4VCS5 1084 aa26.13■■□□□ 1.77
TCF3-219ENST00000610756 PLEKHO1Q53GL0 409 aaPredicted RBP26.13■■□□□ 1.77
TCF3-219ENST00000610756 SULT6B1Q6IMI4 303 aa26.13■■□□□ 1.77
TCF3-219ENST00000610756 MPRIPQ6WCQ1 1025 aa26.13■■□□□ 1.77
TCF3-219ENST00000610756 AEBP1Q8IUX7 1158 aa26.12■■□□□ 1.77
TCF3-219ENST00000610756 PKD1L3Q7Z443 1732 aa26.11■■□□□ 1.77
TCF3-219ENST00000610756 CNGB1Q14028 1251 aaPredicted RBP26.11■■□□□ 1.77
TCF3-219ENST00000610756 LRP5O75197 1615 aa26.1■■□□□ 1.77
TCF3-219ENST00000610756 KDRP35968 1356 aa26.1■■□□□ 1.77
TCF3-219ENST00000610756 DOT1LQ8TEK3 1739 aa26.09■■□□□ 1.77
TCF3-219ENST00000610756 DIAPH1O60610 1272 aaKnown RBP26.09■■□□□ 1.77
TCF3-219ENST00000610756 PIGBQ92521 554 aa26.09■■□□□ 1.77
TCF3-219ENST00000610756 SPON1Q9HCB6 807 aa26.09■■□□□ 1.77
TCF3-219ENST00000610756 PDGFDQ9GZP0 370 aaPredicted RBP26.08■■□□□ 1.77
TCF3-219ENST00000610756 HSP90AB1P08238 724 aaKnown RBP26.07■■□□□ 1.76
TCF3-219ENST00000610756 AKT1S1Q96B36 256 aa26.07■■□□□ 1.76
TCF3-219ENST00000610756 HMGB2P26583 209 aaKnown RBP26.06■■□□□ 1.76
TCF3-219ENST00000610756 KCNQ4P56696 695 aa26.06■■□□□ 1.76
TCF3-219ENST00000610756 SMARCC1Q92922 1105 aaPredicted RBP26.06■■□□□ 1.76
TCF3-219ENST00000610756 CCNL1Q9UK58 526 aaPredicted RBP26.06■■□□□ 1.76
TCF3-219ENST00000610756 ZNF827Q17R98 1081 aa26.05■■□□□ 1.76
TCF3-219ENST00000610756 DCAF5Q96JK2 942 aa26.05■■□□□ 1.76
TCF3-219ENST00000610756 ERVV-2B6SEH9 535 aa26.04■■□□□ 1.76
TCF3-219ENST00000610756 ZNF530Q6P9A1 599 aaPredicted RBP26.04■■□□□ 1.76
TCF3-219ENST00000610756 TMOD3Q9NYL9 352 aa26.04■■□□□ 1.76
TCF3-219ENST00000610756 PALLDQ8WX93 1383 aa26.02■■□□□ 1.76
TCF3-219ENST00000610756 PAPPAQ13219 1627 aa26.01■■□□□ 1.75
TCF3-219ENST00000610756 HMOX1P09601 288 aa26■■□□□ 1.75
TCF3-219ENST00000610756 C1orf141Q5JVX7 400 aa26■■□□□ 1.75
TCF3-219ENST00000610756 ZBTB7AO95365 584 aa25.99■■□□□ 1.75
TCF3-219ENST00000610756 LY75O60449 1722 aa25.98■■□□□ 1.75
TCF3-219ENST00000610756 PPP2R1AP30153 589 aa25.98■■□□□ 1.75
TCF3-219ENST00000610756 MTFR1LQ9H019 292 aa25.98■■□□□ 1.75
TCF3-219ENST00000610756 TFCP2L1Q9NZI6 479 aa25.98■■□□□ 1.75
TCF3-219ENST00000610756 ASAP1Q9ULH1 1129 aa25.97■■□□□ 1.75
TCF3-219ENST00000610756 TOGARAM1Q9Y4F4 1720 aa25.97■■□□□ 1.75
TCF3-219ENST00000610756 CFAP53Q96M91 514 aa25.96■■□□□ 1.75
TCF3-219ENST00000610756 ATF5Q9Y2D1 282 aaPredicted RBP25.96■■□□□ 1.75
TCF3-219ENST00000610756 CASZ1Q86V15 1759 aa25.96■■□□□ 1.75
TCF3-219ENST00000610756 PTGER2P43116 358 aa25.95■■□□□ 1.75
TCF3-219ENST00000610756 AKAP4Q5JQC9 854 aa25.95■■□□□ 1.75
TCF3-219ENST00000610756 SLC16A10Q8TF71 515 aa25.95■■□□□ 1.75
TCF3-219ENST00000610756 ATG3Q9NT62 314 aa25.95■■□□□ 1.75
TCF3-219ENST00000610756 COL3A1P02461 1466 aaPredicted RBP25.95■■□□□ 1.75
TCF3-219ENST00000610756 U2SURPO15042 1029 aaKnown RBP25.94■■□□□ 1.74
TCF3-219ENST00000610756 CABP4P57796 275 aa25.94■■□□□ 1.74
TCF3-219ENST00000610756 PPP1R1BQ9UD71 204 aaPredicted RBP25.94■■□□□ 1.74
TCF3-219ENST00000610756 ITGB4P16144 1822 aa25.94■■□□□ 1.74
TCF3-219ENST00000610756 PNPLA7Q6ZV29 1317 aa25.94■■□□□ 1.74
TCF3-219ENST00000610756 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
TCF3-219ENST00000610756 SIK1P57059 783 aa25.93■■□□□ 1.74
TCF3-219ENST00000610756 KDM6AO15550 1401 aaPredicted RBP25.92■■□□□ 1.74
TCF3-219ENST00000610756 MTHFSDQ2M296 383 aaKnown RBP25.9■■□□□ 1.74
TCF3-219ENST00000610756 NFATC2IPQ8NCF5 419 aa25.9■■□□□ 1.74
TCF3-219ENST00000610756 SGIP1Q9BQI5 828 aa25.9■■□□□ 1.74
TCF3-219ENST00000610756 NUDCQ9Y266 331 aa25.9■■□□□ 1.74
TCF3-219ENST00000610756 ZEB1P37275 1124 aaPredicted RBP25.88■■□□□ 1.73
TCF3-219ENST00000610756 ATP6V1AP38606 617 aa25.88■■□□□ 1.73
TCF3-219ENST00000610756 FLAD1Q8NFF5 587 aa25.88■■□□□ 1.73
TCF3-219ENST00000610756 LGR6Q9HBX8 967 aa25.88■■□□□ 1.73
TCF3-219ENST00000610756 COL23A1Q86Y22 540 aaPredicted RBP25.87■■□□□ 1.73
TCF3-219ENST00000610756 DDX10Q13206 875 aaKnown RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms