RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TRPM1Q7Z4N2 1603 aa8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 ZSCAN30Q86W11 494 aa8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 CLASRPQ8N2M8 674 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 LRRFIP2Q9Y608 721 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-206ENST00000610556 MCM2P49736 904 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 XPCQ01831 940 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 PSME1Q06323 249 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 ANKRD44Q8N8A2 993 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 RBM33Q96EV2 1170 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 PLEKHF1Q96S99 279 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 TSPY26PQ9H489 355 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 MYO5CQ9NQX4 1742 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 ATP7AQ04656 1500 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 CSPP1Q1MSJ5 1256 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 CNTROBQ8N137 903 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 PUS7Q96PZ0 661 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 SRCIN1Q9C0H9 1055 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 EIF4A2Q14240 407 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 KLHL40Q2TBA0 621 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 CHMP4AQ9BY43 222 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 DCTPP1Q9H773 170 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 NPATQ14207 1427 aa8.29□□□□□ -1.08
SYNPO2-206ENST00000610556 H3BQV1 296 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 CD2BP2O95400 341 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 CLCN1P35523 988 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 IFFO2Q5TF58 517 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 ZNF518AQ6AHZ1 1483 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 SIL1Q9H173 461 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 ANXA1P04083 346 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 FLIIQ13045 1269 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 FBXW7Q969H0 707 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 HDAC5Q9UQL6 1122 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 SIGLEC1Q9BZZ2 1709 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 CEP85Q6P2H3 762 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 CCDC39Q9UFE4 941 aa8.28□□□□□ -1.08
SYNPO2-206ENST00000610556 ACEP12821 1306 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 DTNBO60941 627 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 PDE1AP54750 535 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 ZSCAN23Q3MJ62 389 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 G2E3Q7L622 706 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 BICD2Q8TD16 824 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 UBE2Q2Q8WVN8 375 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 TMX3Q96JJ7 454 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 CHAMP1Q96JM3 812 aa8.27□□□□□ -1.08
SYNPO2-206ENST00000610556 CEBPAP49715 358 aaPredicted RBP8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 GORABQ5T7V8 394 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 SPC24Q8NBT2 197 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 SBNO2Q9Y2G9 1366 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 SYNMO15061 1565 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 IL13P35225 146 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 HSP90AB4PQ58FF6 505 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 FERMT3Q86UX7 667 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 GAS2L3Q86XJ1 694 aa8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.27□□□□□ -1.09
SYNPO2-206ENST00000610556 WDR33Q9C0J8 1336 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 ARAP3Q8WWN8 1544 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 GNAT3A8MTJ3 354 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 GOLGA6L6A8MZA4 724 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 PRIM1P49642 420 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 STK3Q13188 491 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 RIC3Q7Z5B4 369 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 FSD1Q9BTV5 496 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 SPG7Q9UQ90 795 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 NEXNQ0ZGT2 675 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 TAF7Q15545 349 aaPredicted RBP8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 GLI2P10070 1586 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 TPM2P07951 284 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 GSPT1P15170 499 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 ZNF592Q92610 1267 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 JAKMIP1Q96N16 626 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 PPIP5K1Q6PFW1 1433 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 YTHDC2Q9H6S0 1430 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 TRPM2O94759 1503 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 PTPRCP08575 1304 aa8.26□□□□□ -1.09
SYNPO2-206ENST00000610556 PKP1Q13835 747 aa8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 ZNF530Q6P9A1 599 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 KDM5AP29375 1690 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 CASTP20810 708 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 CEBPZQ03701 1054 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 MTHFSDQ2M296 383 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 CCDC83Q8IWF9 413 aa8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 HTATSF1O43719 755 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 ESCO1Q5FWF5 840 aa8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 FRMPD1Q5SYB0 1578 aa8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 TTC21BQ7Z4L5 1316 aa8.25□□□□□ -1.09
SYNPO2-206ENST00000610556 UQCRHLA0A096LP55 91 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 UQCRHP07919 91 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 GNL2Q13823 731 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 AACSQ86V21 672 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 PHF23Q9BUL5 403 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 RICTORQ6R327 1708 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 DDX58O95786 925 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 SF3A1Q15459 793 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 RNF20Q5VTR2 975 aa8.24□□□□□ -1.09
SYNPO2-206ENST00000610556 PRPF40BQ6NWY9 871 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms