RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SMC5Q8IY18 1101 aa35.52■■■■□ 3.28
CSPG5-205ENST00000610462 FOXO3O43524 673 aa35.51■■■■□ 3.28
CSPG5-205ENST00000610462 RTF1Q92541 710 aaKnown RBP35.51■■■■□ 3.28
CSPG5-205ENST00000610462 PSME1Q06323 249 aa35.48■■■■□ 3.27
CSPG5-205ENST00000610462 NFAT5O94916 1531 aa35.48■■■■□ 3.27
CSPG5-205ENST00000610462 HTATSF1O43719 755 aaKnown RBP35.47■■■■□ 3.27
CSPG5-205ENST00000610462 LRRC37A3O60309 1634 aa35.45■■■■□ 3.27
CSPG5-205ENST00000610462 KRT24Q2M2I5 525 aa35.45■■■■□ 3.27
CSPG5-205ENST00000610462 IP6K1Q92551 441 aa35.42■■■■□ 3.26
CSPG5-205ENST00000610462 PHRF1Q9P1Y6 1649 aaKnown RBP35.42■■■■□ 3.26
CSPG5-205ENST00000610462 LTV1Q96GA3 475 aaPredicted RBP35.41■■■■□ 3.26
CSPG5-205ENST00000610462 KCNH5Q8NCM2 988 aa35.39■■■■□ 3.26
CSPG5-205ENST00000610462 TSPYL4Q9UJ04 414 aa35.39■■■■□ 3.26
CSPG5-205ENST00000610462 DNAJC5Q9H3Z4 198 aa35.39■■■■□ 3.26
CSPG5-205ENST00000610462 USP19O94966 1318 aa35.38■■■■□ 3.25
CSPG5-205ENST00000610462 GNAT3A8MTJ3 354 aa35.37■■■■□ 3.25
CSPG5-205ENST00000610462 MIS18AQ9NYP9 233 aa35.37■■■■□ 3.25
CSPG5-205ENST00000610462 SEC24BO95487 1268 aa35.36■■■■□ 3.25
CSPG5-205ENST00000610462 NUCB1Q02818 461 aa35.36■■■■□ 3.25
CSPG5-205ENST00000610462 ORAI2Q96SN7 254 aa35.36■■■■□ 3.25
CSPG5-205ENST00000610462 RGS12O14924 1447 aa35.36■■■■□ 3.25
CSPG5-205ENST00000610462 INTS3Q68E01 1043 aaKnown RBP35.35■■■■□ 3.25
CSPG5-205ENST00000610462 PROSER2Q86WR7 435 aaPredicted RBP35.35■■■■□ 3.25
CSPG5-205ENST00000610462 PTPRCP08575 1304 aa35.35■■■■□ 3.25
CSPG5-205ENST00000610462 MAP3K5Q99683 1374 aa35.34■■■■□ 3.25
CSPG5-205ENST00000610462 C1orf115Q9H7X2 142 aa35.33■■■■□ 3.25
CSPG5-205ENST00000610462 KIF1AQ12756 1690 aa35.32■■■■□ 3.25
CSPG5-205ENST00000610462 TRPM3Q9HCF6 1732 aaPredicted RBP35.32■■■■□ 3.24
CSPG5-205ENST00000610462 GCC1Q96CN9 775 aa35.32■■■■□ 3.24
CSPG5-205ENST00000610462 MSH6P52701 1360 aa35.31■■■■□ 3.24
CSPG5-205ENST00000610462 SLIT3O75094 1523 aa35.31■■■■□ 3.24
CSPG5-205ENST00000610462 CHD1LQ86WJ1 897 aa35.28■■■■□ 3.24
CSPG5-205ENST00000610462 USHBP1Q8N6Y0 703 aa35.28■■■■□ 3.24
CSPG5-205ENST00000610462 RGPD2P0DJD1 1756 aa35.28■■■■□ 3.24
CSPG5-205ENST00000610462 SIRT2Q8IXJ6 389 aa35.28■■■■□ 3.24
CSPG5-205ENST00000610462 SLC4A2P04920 1241 aa35.26■■■■□ 3.24
CSPG5-205ENST00000610462 IL17REQ8NFR9 667 aa35.26■■■■□ 3.24
CSPG5-205ENST00000610462 BABAM1Q9NWV8 329 aa35.26■■■■□ 3.24
CSPG5-205ENST00000610462 C1orf167Q5SNV9 1468 aa35.26■■■■□ 3.24
CSPG5-205ENST00000610462 DAXXQ9UER7 740 aaPredicted RBP35.26■■■■□ 3.23
CSPG5-205ENST00000610462 NBPF6Q5VWK0 638 aa35.25■■■■□ 3.23
CSPG5-205ENST00000610462 NBPF4Q96M43 638 aa35.25■■■■□ 3.23
CSPG5-205ENST00000610462 C19orf44Q9H6X5 657 aa35.25■■■■□ 3.23
CSPG5-205ENST00000610462 XPCQ01831 940 aaPredicted RBP35.24■■■■□ 3.23
CSPG5-205ENST00000610462 LNPKQ9C0E8 428 aa35.24■■■■□ 3.23
CSPG5-205ENST00000610462 UPF2Q9HAU5 1272 aaKnown RBP35.24■■■■□ 3.23
CSPG5-205ENST00000610462 GCP02774 474 aa35.23■■■■□ 3.23
CSPG5-205ENST00000610462 NBR1Q14596 966 aa35.22■■■■□ 3.23
CSPG5-205ENST00000610462 FAM208AQ9UK61 1670 aaKnown RBP35.22■■■■□ 3.23
CSPG5-205ENST00000610462 ZBTB7CA1YPR0 619 aa35.21■■■■□ 3.23
CSPG5-205ENST00000610462 ARHGEF25Q86VW2 580 aa35.21■■■■□ 3.23
CSPG5-205ENST00000610462 SOS1Q07889 1333 aaPredicted RBP35.21■■■■□ 3.23
CSPG5-205ENST00000610462 CACNA1FO60840 1977 aa35.21■■■■□ 3.23
CSPG5-205ENST00000610462 TAF7Q15545 349 aaPredicted RBP35.21■■■■□ 3.23
CSPG5-205ENST00000610462 KRT28Q7Z3Y7 464 aa35.21■■■■□ 3.23
CSPG5-205ENST00000610462 ANKRD45Q5TZF3 282 aa35.2■■■■□ 3.22
CSPG5-205ENST00000610462 SLC4A3P48751 1232 aa35.18■■■■□ 3.22
CSPG5-205ENST00000610462 MST1RQ04912 1400 aa35.17■■■■□ 3.22
CSPG5-205ENST00000610462 STRCP1A6NGW2 1772 aa35.17■■■■□ 3.22
CSPG5-205ENST00000610462 TBC1D32Q96NH3 1257 aa35.17■■■■□ 3.22
CSPG5-205ENST00000610462 STK31Q9BXU1 1019 aa35.17■■■■□ 3.22
CSPG5-205ENST00000610462 LMO7Q8WWI1 1683 aa35.16■■■■□ 3.22
CSPG5-205ENST00000610462 CEMIPQ8WUJ3 1361 aa35.16■■■■□ 3.22
CSPG5-205ENST00000610462 G2E3Q7L622 706 aa35.16■■■■□ 3.22
CSPG5-205ENST00000610462 ALS2Q96Q42 1657 aa35.15■■■■□ 3.22
CSPG5-205ENST00000610462 MED1Q15648 1581 aaPredicted RBP35.15■■■■□ 3.22
CSPG5-205ENST00000610462 NCAPD2Q15021 1401 aa35.15■■■■□ 3.22
CSPG5-205ENST00000610462 ATP10DQ9P241 1426 aa35.15■■■■□ 3.22
CSPG5-205ENST00000610462 CCDC30Q5VVM6 783 aa35.15■■■■□ 3.22
CSPG5-205ENST00000610462 LMOD2Q6P5Q4 547 aa35.15■■■■□ 3.22
CSPG5-205ENST00000610462 ANKRD44Q8N8A2 993 aa35.14■■■■□ 3.22
CSPG5-205ENST00000610462 RPAP2Q8IXW5 612 aaPredicted RBP35.13■■■■□ 3.21
CSPG5-205ENST00000610462 LRRC59Q96AG4 307 aaKnown RBP35.13■■■■□ 3.21
CSPG5-205ENST00000610462 CAMTA1Q9Y6Y1 1673 aa35.12■■■■□ 3.21
CSPG5-205ENST00000610462 DCTPP1Q9H773 170 aa35.12■■■■□ 3.21
CSPG5-205ENST00000610462 DCCP43146 1447 aa35.11■■■■□ 3.21
CSPG5-205ENST00000610462 NCOA3Q9Y6Q9 1424 aa35.11■■■■□ 3.21
CSPG5-205ENST00000610462 CCT4P50991 539 aaKnown RBP35.1■■■■□ 3.21
CSPG5-205ENST00000610462 TMEM94Q12767 1356 aa35.1■■■■□ 3.21
CSPG5-205ENST00000610462 ATF3P18847 181 aa35.09■■■■□ 3.21
CSPG5-205ENST00000610462 KDM3BQ7LBC6 1761 aa35.09■■■■□ 3.21
CSPG5-205ENST00000610462 BMP2KLQ5H9B9 411 aa35.09■■■■□ 3.21
CSPG5-205ENST00000610462 MEIS3Q99687 375 aa35.09■■■■□ 3.21
CSPG5-205ENST00000610462 PLEKHO1Q53GL0 409 aaPredicted RBP35.08■■■■□ 3.21
CSPG5-205ENST00000610462 CEP85Q6P2H3 762 aa35.08■■■■□ 3.21
CSPG5-205ENST00000610462 ANKRD24Q8TF21 1146 aa35.08■■■■□ 3.21
CSPG5-205ENST00000610462 AKAP4Q5JQC9 854 aa35.07■■■■□ 3.2
CSPG5-205ENST00000610462 RGPD5Q99666 1765 aa35.07■■■■□ 3.2
CSPG5-205ENST00000610462 F6X3S4 739 aa35.06■■■■□ 3.2
CSPG5-205ENST00000610462 PLEKHG5O94827 1062 aa35.06■■■■□ 3.2
CSPG5-205ENST00000610462 AMOTQ4VCS5 1084 aa35.06■■■■□ 3.2
CSPG5-205ENST00000610462 FLIIQ13045 1269 aa35.05■■■■□ 3.2
CSPG5-205ENST00000610462 N4BP2Q86UW6 1770 aaPredicted RBP35.05■■■■□ 3.2
CSPG5-205ENST00000610462 SLC4A10Q6U841 1118 aa35.05■■■■□ 3.2
CSPG5-205ENST00000610462 BECN1Q14457 450 aa35.04■■■■□ 3.2
CSPG5-205ENST00000610462 ZNF530Q6P9A1 599 aaPredicted RBP35.04■■■■□ 3.2
CSPG5-205ENST00000610462 LGR6Q9HBX8 967 aa35.04■■■■□ 3.2
CSPG5-205ENST00000610462 RTL5Q5HYW3 569 aaPredicted RBP35.03■■■■□ 3.2
CSPG5-205ENST00000610462 MFAP1P55081 439 aaKnown RBP35.02■■■■□ 3.2
CSPG5-205ENST00000610462 AXIN2Q9Y2T1 843 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms