RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 PLSCR1O15162 318 aa18.22■□□□□ 0.51
SENP3-209ENST00000610454 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
SENP3-209ENST00000610454 NUP188Q5SRE5 1749 aa18.22■□□□□ 0.51
SENP3-209ENST00000610454 SHANK3Q9BYB0 1731 aa18.21■□□□□ 0.51
SENP3-209ENST00000610454 NBPF14Q5TI25 921 aa18.21■□□□□ 0.51
SENP3-209ENST00000610454 PCDH11XQ9BZA7 1347 aa18.21■□□□□ 0.51
SENP3-209ENST00000610454 PCDH11YQ9BZA8 1340 aa18.21■□□□□ 0.51
SENP3-209ENST00000610454 PSDA5PKW4 1024 aaPredicted RBP18.2■□□□□ 0.5
SENP3-209ENST00000610454 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
SENP3-209ENST00000610454 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
SENP3-209ENST00000610454 KCNQ2O43526 872 aa18.19■□□□□ 0.5
SENP3-209ENST00000610454 CNGB1Q14028 1251 aaPredicted RBP18.19■□□□□ 0.5
SENP3-209ENST00000610454 PTF1AQ7RTS3 328 aa18.19■□□□□ 0.5
SENP3-209ENST00000610454 DOT1LQ8TEK3 1739 aa18.19■□□□□ 0.5
SENP3-209ENST00000610454 SYTL4Q96C24 671 aaPredicted RBP18.19■□□□□ 0.5
SENP3-209ENST00000610454 EYA1Q99502 592 aa18.19■□□□□ 0.5
SENP3-209ENST00000610454 BTAF1O14981 1849 aa18.19■□□□□ 0.5
SENP3-209ENST00000610454 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
SENP3-209ENST00000610454 R3HDM1Q15032 1099 aaKnown RBP18.18■□□□□ 0.5
SENP3-209ENST00000610454 NCAPD2Q15021 1401 aa18.17■□□□□ 0.5
SENP3-209ENST00000610454 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
SENP3-209ENST00000610454 PKD1L3Q7Z443 1732 aa18.17■□□□□ 0.5
SENP3-209ENST00000610454 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
SENP3-209ENST00000610454 SRCAPQ6ZRS2 3230 aa18.15■□□□□ 0.5
SENP3-209ENST00000610454 TXNRD1Q16881 649 aa18.14■□□□□ 0.49
SENP3-209ENST00000610454 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
SENP3-209ENST00000610454 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
SENP3-209ENST00000610454 MTHFSP49914 203 aa18.13■□□□□ 0.49
SENP3-209ENST00000610454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
SENP3-209ENST00000610454 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
SENP3-209ENST00000610454 CYP27B1O15528 508 aa18.1■□□□□ 0.49
SENP3-209ENST00000610454 STK32BQ9NY57 414 aa18.09■□□□□ 0.49
SENP3-209ENST00000610454 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
SENP3-209ENST00000610454 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.48
SENP3-209ENST00000610454 PROM2Q8N271 834 aa18.08■□□□□ 0.48
SENP3-209ENST00000610454 LRP5O75197 1615 aa18.08■□□□□ 0.48
SENP3-209ENST00000610454 DIAPH1O60610 1272 aaKnown RBP18.07■□□□□ 0.48
SENP3-209ENST00000610454 IL13P35225 146 aa18.07■□□□□ 0.48
SENP3-209ENST00000610454 SULT6B1Q6IMI4 303 aa18.07■□□□□ 0.48
SENP3-209ENST00000610454 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
SENP3-209ENST00000610454 SLC27A3Q5K4L6 730 aa18.06■□□□□ 0.48
SENP3-209ENST00000610454 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
SENP3-209ENST00000610454 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
SENP3-209ENST00000610454 ITGB4P16144 1822 aa18.06■□□□□ 0.48
SENP3-209ENST00000610454 PHKG2P15735 406 aa18.05■□□□□ 0.48
SENP3-209ENST00000610454 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
SENP3-209ENST00000610454 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
SENP3-209ENST00000610454 CFAP53Q96M91 514 aa18.05■□□□□ 0.48
SENP3-209ENST00000610454 TOGARAM1Q9Y4F4 1720 aa18.05■□□□□ 0.48
SENP3-209ENST00000610454 LY75O60449 1722 aa18.04■□□□□ 0.48
SENP3-209ENST00000610454 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
SENP3-209ENST00000610454 NKX1-1Q15270 411 aaPredicted RBP18.04■□□□□ 0.48
SENP3-209ENST00000610454 C1orf141Q5JVX7 400 aa18.04■□□□□ 0.48
SENP3-209ENST00000610454 ZNF530Q6P9A1 599 aaPredicted RBP18.04■□□□□ 0.48
SENP3-209ENST00000610454 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
SENP3-209ENST00000610454 TMOD3Q9NYL9 352 aa18.03■□□□□ 0.48
SENP3-209ENST00000610454 KDRP35968 1356 aa18.03■□□□□ 0.48
SENP3-209ENST00000610454 HMGB2P26583 209 aaKnown RBP18.02■□□□□ 0.48
SENP3-209ENST00000610454 CCNL1Q9UK58 526 aaPredicted RBP18.02■□□□□ 0.48
SENP3-209ENST00000610454 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
SENP3-209ENST00000610454 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
SENP3-209ENST00000610454 HMOX1P09601 288 aa18.01■□□□□ 0.47
SENP3-209ENST00000610454 SMARCC1Q92922 1105 aaPredicted RBP18.01■□□□□ 0.47
SENP3-209ENST00000610454 PALLDQ8WX93 1383 aa18.01■□□□□ 0.47
SENP3-209ENST00000610454 DCAF5Q96JK2 942 aa18■□□□□ 0.47
SENP3-209ENST00000610454 SPON1Q9HCB6 807 aa18■□□□□ 0.47
SENP3-209ENST00000610454 LRRC4BQ9NT99 713 aa18■□□□□ 0.47
SENP3-209ENST00000610454 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
SENP3-209ENST00000610454 PPP2R1AP30153 589 aa17.98■□□□□ 0.47
SENP3-209ENST00000610454 KCNQ4P56696 695 aa17.98■□□□□ 0.47
SENP3-209ENST00000610454 PIGBQ92521 554 aa17.98■□□□□ 0.47
SENP3-209ENST00000610454 NUDCQ9Y266 331 aa17.98■□□□□ 0.47
SENP3-209ENST00000610454 CASZ1Q86V15 1759 aa17.98■□□□□ 0.47
SENP3-209ENST00000610454 ERVV-2B6SEH9 535 aa17.97■□□□□ 0.47
SENP3-209ENST00000610454 TFCP2L1Q9NZI6 479 aa17.97■□□□□ 0.47
SENP3-209ENST00000610454 PPP1R1BQ9UD71 204 aaPredicted RBP17.97■□□□□ 0.47
SENP3-209ENST00000610454 C5P01031 1676 aa17.96■□□□□ 0.47
SENP3-209ENST00000610454 ZNF827Q17R98 1081 aa17.96■□□□□ 0.47
SENP3-209ENST00000610454 CABP4P57796 275 aa17.95■□□□□ 0.46
SENP3-209ENST00000610454 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
SENP3-209ENST00000610454 ZBTB7AO95365 584 aa17.94■□□□□ 0.46
SENP3-209ENST00000610454 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
SENP3-209ENST00000610454 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
SENP3-209ENST00000610454 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
SENP3-209ENST00000610454 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
SENP3-209ENST00000610454 PDGFDQ9GZP0 370 aaPredicted RBP17.93■□□□□ 0.46
SENP3-209ENST00000610454 SCN11AQ9UI33 1791 aa17.93■□□□□ 0.46
SENP3-209ENST00000610454 TAF1LQ8IZX4 1826 aa17.93■□□□□ 0.46
SENP3-209ENST00000610454 ASAP1Q9ULH1 1129 aa17.92■□□□□ 0.46
SENP3-209ENST00000610454 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
SENP3-209ENST00000610454 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
SENP3-209ENST00000610454 MSH5O43196 834 aa17.91■□□□□ 0.46
SENP3-209ENST00000610454 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
SENP3-209ENST00000610454 SIK1P57059 783 aa17.91■□□□□ 0.46
SENP3-209ENST00000610454 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
SENP3-209ENST00000610454 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
SENP3-209ENST00000610454 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
SENP3-209ENST00000610454 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
SENP3-209ENST00000610454 GAS2L2Q8NHY3 880 aa17.9■□□□□ 0.46
SENP3-209ENST00000610454 AK7Q96M32 723 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms