RNA–Protein interactions for RNA: ENST00000608796.5

SWI5-206, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SWI5, Length 906 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-206ENST00000608796 GOLGB1Q14789 3259 aaKnown RBP22.96■■□□□ 1.27
SWI5-206ENST00000608796 FAM208AQ9UK61 1670 aaKnown RBP22.96■■□□□ 1.27
SWI5-206ENST00000608796 POLD1P28340 1107 aa22.95■■□□□ 1.26
SWI5-206ENST00000608796 CHD4Q14839 1912 aa22.95■■□□□ 1.26
SWI5-206ENST00000608796 RGPD2P0DJD1 1756 aa22.94■■□□□ 1.26
SWI5-206ENST00000608796 RRS1Q15050 365 aaKnown RBP22.93■■□□□ 1.26
SWI5-206ENST00000608796 NBPF6Q5VWK0 638 aa22.93■■□□□ 1.26
SWI5-206ENST00000608796 NBPF4Q96M43 638 aa22.93■■□□□ 1.26
SWI5-206ENST00000608796 DOT1LQ8TEK3 1739 aa22.91■■□□□ 1.26
SWI5-206ENST00000608796 NSD2O96028 1365 aa22.91■■□□□ 1.26
SWI5-206ENST00000608796 SLC24A1O60721 1099 aa22.91■■□□□ 1.26
SWI5-206ENST00000608796 PELP1Q8IZL8 1130 aaKnown RBP22.91■■□□□ 1.26
SWI5-206ENST00000608796 USHBP1Q8N6Y0 703 aa22.91■■□□□ 1.26
SWI5-206ENST00000608796 GGNBP2Q9H3C7 697 aa22.91■■□□□ 1.26
SWI5-206ENST00000608796 CCNL1Q9UK58 526 aaPredicted RBP22.91■■□□□ 1.26
SWI5-206ENST00000608796 MEGF6O75095 1541 aa22.91■■□□□ 1.26
SWI5-206ENST00000608796 QSER1Q2KHR3 1735 aa22.91■■□□□ 1.26
SWI5-206ENST00000608796 FYB1O15117 783 aa22.9■■□□□ 1.26
SWI5-206ENST00000608796 LY75O60449 1722 aa22.88■■□□□ 1.25
SWI5-206ENST00000608796 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
SWI5-206ENST00000608796 MSH5O43196 834 aa22.88■■□□□ 1.25
SWI5-206ENST00000608796 NLGN2Q8NFZ4 835 aa22.88■■□□□ 1.25
SWI5-206ENST00000608796 TUBGCP6Q96RT7 1819 aa22.87■■□□□ 1.25
SWI5-206ENST00000608796 COL24A1Q17RW2 1714 aa22.86■■□□□ 1.25
SWI5-206ENST00000608796 COL23A1Q86Y22 540 aaPredicted RBP22.86■■□□□ 1.25
SWI5-206ENST00000608796 RAPGEF4Q8WZA2 1011 aa22.86■■□□□ 1.25
SWI5-206ENST00000608796 RTL1A6NKG5 1358 aa22.86■■□□□ 1.25
SWI5-206ENST00000608796 USP47Q96K76 1375 aa22.86■■□□□ 1.25
SWI5-206ENST00000608796 C1QTNF8P60827 252 aa22.85■■□□□ 1.25
SWI5-206ENST00000608796 CGNL1Q0VF96 1302 aa22.84■■□□□ 1.25
SWI5-206ENST00000608796 TMF1P82094 1093 aa22.84■■□□□ 1.25
SWI5-206ENST00000608796 HSP90AB2PQ58FF8 381 aa22.84■■□□□ 1.25
SWI5-206ENST00000608796 SENP3-EIF4A1A0A087X0R7 540 aa22.83■■□□□ 1.25
SWI5-206ENST00000608796 TATP17735 454 aaPredicted RBP22.83■■□□□ 1.25
SWI5-206ENST00000608796 SMG6Q86US8 1419 aaKnown RBP22.82■■□□□ 1.24
SWI5-206ENST00000608796 MSL1Q68DK7 614 aa22.8■■□□□ 1.24
SWI5-206ENST00000608796 MPRIPQ6WCQ1 1025 aa22.8■■□□□ 1.24
SWI5-206ENST00000608796 INSRP06213 1382 aa22.78■■□□□ 1.24
SWI5-206ENST00000608796 YBX3P16989 372 aaKnown RBP eCLIP22.78■■□□□ 1.24
SWI5-206ENST00000608796 PCDH11XQ9BZA7 1347 aa22.78■■□□□ 1.24
SWI5-206ENST00000608796 PCDH11YQ9BZA8 1340 aa22.78■■□□□ 1.24
SWI5-206ENST00000608796 CYP27B1O15528 508 aa22.76■■□□□ 1.23
SWI5-206ENST00000608796 FLT4P35916 1363 aa22.76■■□□□ 1.23
SWI5-206ENST00000608796 GRIN3BO60391 1043 aa22.75■■□□□ 1.23
SWI5-206ENST00000608796 GIGYF1O75420 1035 aaPredicted RBP22.75■■□□□ 1.23
SWI5-206ENST00000608796 PALLDQ8WX93 1383 aa22.75■■□□□ 1.23
SWI5-206ENST00000608796 CARD14Q9BXL6 1004 aa22.74■■□□□ 1.23
SWI5-206ENST00000608796 EMILIN1Q9Y6C2 1016 aa22.74■■□□□ 1.23
SWI5-206ENST00000608796 C5P01031 1676 aa22.74■■□□□ 1.23
SWI5-206ENST00000608796 CDCA8Q53HL2 280 aa22.73■■□□□ 1.23
SWI5-206ENST00000608796 FLAD1Q8NFF5 587 aa22.73■■□□□ 1.23
SWI5-206ENST00000608796 PPM1GO15355 546 aaPredicted RBP22.72■■□□□ 1.23
SWI5-206ENST00000608796 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
SWI5-206ENST00000608796 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
SWI5-206ENST00000608796 HMGB2P26583 209 aaKnown RBP22.71■■□□□ 1.23
SWI5-206ENST00000608796 CD2APQ9Y5K6 639 aa22.7■■□□□ 1.22
SWI5-206ENST00000608796 TAF1LQ8IZX4 1826 aa22.7■■□□□ 1.22
SWI5-206ENST00000608796 SMIM5Q71RC9 77 aa22.69■■□□□ 1.22
SWI5-206ENST00000608796 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
SWI5-206ENST00000608796 PIGBQ92521 554 aa22.69■■□□□ 1.22
SWI5-206ENST00000608796 SMARCC1Q92922 1105 aaPredicted RBP22.69■■□□□ 1.22
SWI5-206ENST00000608796 AK7Q96M32 723 aa22.68■■□□□ 1.22
SWI5-206ENST00000608796 ITGB4P16144 1822 aa22.68■■□□□ 1.22
SWI5-206ENST00000608796 TOGARAM1Q9Y4F4 1720 aa22.67■■□□□ 1.22
SWI5-206ENST00000608796 NSD3Q9BZ95 1437 aa22.66■■□□□ 1.22
SWI5-206ENST00000608796 PHF14O94880 888 aa22.66■■□□□ 1.22
SWI5-206ENST00000608796 NKX1-1Q15270 411 aaPredicted RBP22.66■■□□□ 1.22
SWI5-206ENST00000608796 SPG7Q9UQ90 795 aa22.66■■□□□ 1.22
SWI5-206ENST00000608796 CEP350Q5VT06 3117 aa22.66■■□□□ 1.22
SWI5-206ENST00000608796 C4BP0C0L5 1744 aa22.65■■□□□ 1.22
SWI5-206ENST00000608796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.64■■□□□ 1.21
SWI5-206ENST00000608796 WASHC2AQ641Q2 1341 aa22.63■■□□□ 1.21
SWI5-206ENST00000608796 EYA1Q99502 592 aa22.63■■□□□ 1.21
SWI5-206ENST00000608796 PKD1L3Q7Z443 1732 aa22.62■■□□□ 1.21
SWI5-206ENST00000608796 LOC102724428A0A0B4J2F2 783 aa22.62■■□□□ 1.21
SWI5-206ENST00000608796 SIK1P57059 783 aa22.62■■□□□ 1.21
SWI5-206ENST00000608796 LINC00116Q8NCU8 138 aa22.62■■□□□ 1.21
SWI5-206ENST00000608796 WWC3Q9ULE0 1092 aa22.62■■□□□ 1.21
SWI5-206ENST00000608796 TMOD3Q9NYL9 352 aa22.61■■□□□ 1.21
SWI5-206ENST00000608796 NCAPD2Q15021 1401 aa22.6■■□□□ 1.21
SWI5-206ENST00000608796 ATP10DQ9P241 1426 aa22.6■■□□□ 1.21
SWI5-206ENST00000608796 ASAP1Q9ULH1 1129 aa22.6■■□□□ 1.21
SWI5-206ENST00000608796 UBR3Q6ZT12 1888 aa22.6■■□□□ 1.21
SWI5-206ENST00000608796 SSFA2P28290 1259 aa22.59■■□□□ 1.21
SWI5-206ENST00000608796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.59■■□□□ 1.21
SWI5-206ENST00000608796 POLKQ9UBT6 870 aa22.59■■□□□ 1.21
SWI5-206ENST00000608796 MAP2P11137 1827 aaKnown RBP22.59■■□□□ 1.21
SWI5-206ENST00000608796 IGSF1Q8N6C5 1336 aa22.58■■□□□ 1.21
SWI5-206ENST00000608796 ATP6V1AP38606 617 aa22.58■■□□□ 1.21
SWI5-206ENST00000608796 ITPK1Q13572 414 aa22.58■■□□□ 1.21
SWI5-206ENST00000608796 IFNL2Q8IZJ0 200 aa22.58■■□□□ 1.21
SWI5-206ENST00000608796 PHKG2P15735 406 aa22.57■■□□□ 1.2
SWI5-206ENST00000608796 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
SWI5-206ENST00000608796 GPBP1L1Q9HC44 474 aaPredicted RBP22.57■■□□□ 1.2
SWI5-206ENST00000608796 GNPATO15228 680 aa22.56■■□□□ 1.2
SWI5-206ENST00000608796 TNNT2P45379 298 aaPredicted RBP22.56■■□□□ 1.2
SWI5-206ENST00000608796 ZNF526Q8TF50 670 aaPredicted RBP22.56■■□□□ 1.2
SWI5-206ENST00000608796 POLR3GLQ9BT43 218 aa22.56■■□□□ 1.2
SWI5-206ENST00000608796 ANKRD26Q9UPS8 1709 aa22.55■■□□□ 1.2
SWI5-206ENST00000608796 ATG3Q9NT62 314 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms