RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	SLC27A3	Q5K4L6	730 aa		29.62	■■■□□ 2.33
NECAB3-222	ENST00000607805	NSD2	O96028	1365 aa		29.62	■■■□□ 2.33
NECAB3-222	ENST00000607805	RTL1	A6NKG5	1358 aa		29.61	■■■□□ 2.33
NECAB3-222	ENST00000607805	ARX	Q96QS3	562 aa		29.6	■■■□□ 2.33
NECAB3-222	ENST00000607805	AMPH	P49418	695 aa		29.58	■■■□□ 2.33
NECAB3-222	ENST00000607805	FYB1	O15117	783 aa		29.57	■■■□□ 2.32
NECAB3-222	ENST00000607805	PRIM1	P49642	420 aa	Known RBP	29.56	■■■□□ 2.32
NECAB3-222	ENST00000607805	ZCRB1	Q8TBF4	217 aa	Known RBP	29.56	■■■□□ 2.32
NECAB3-222	ENST00000607805	SLC16A10	Q8TF71	515 aa		29.56	■■■□□ 2.32
NECAB3-222	ENST00000607805	PNPLA7	Q6ZV29	1317 aa		29.55	■■■□□ 2.32
NECAB3-222	ENST00000607805	NBPF6	Q5VWK0	638 aa		29.54	■■■□□ 2.32
NECAB3-222	ENST00000607805	NBPF4	Q96M43	638 aa		29.54	■■■□□ 2.32
NECAB3-222	ENST00000607805	TAF1L	Q8IZX4	1826 aa		29.54	■■■□□ 2.32
NECAB3-222	ENST00000607805	RRS1	Q15050	365 aa	Known RBP	29.53	■■■□□ 2.32
NECAB3-222	ENST00000607805	ITGB4	P16144	1822 aa		29.51	■■■□□ 2.31
NECAB3-222	ENST00000607805	KCNQ4	P56696	695 aa		29.51	■■■□□ 2.31
NECAB3-222	ENST00000607805	ZNF784	Q8NCA9	323 aa	Predicted RBP	29.51	■■■□□ 2.31
NECAB3-222	ENST00000607805	USP47	Q96K76	1375 aa		29.51	■■■□□ 2.31
NECAB3-222	ENST00000607805	CGNL1	Q0VF96	1302 aa		29.5	■■■□□ 2.31
NECAB3-222	ENST00000607805	SYTL4	Q96C24	671 aa	Predicted RBP	29.5	■■■□□ 2.31
NECAB3-222	ENST00000607805	GGNBP2	Q9H3C7	697 aa		29.5	■■■□□ 2.31
NECAB3-222	ENST00000607805	TMF1	P82094	1093 aa		29.49	■■■□□ 2.31
NECAB3-222	ENST00000607805	C5	P01031	1676 aa		29.49	■■■□□ 2.31
NECAB3-222	ENST00000607805	INSR	P06213	1382 aa		29.47	■■■□□ 2.31
NECAB3-222	ENST00000607805	ANKRD26	Q9UPS8	1709 aa		29.46	■■■□□ 2.31
NECAB3-222	ENST00000607805	MAP2	P11137	1827 aa	Known RBP	29.46	■■■□□ 2.31
NECAB3-222	ENST00000607805	TFCP2L1	Q9NZI6	479 aa		29.46	■■■□□ 2.31
NECAB3-222	ENST00000607805	PKD1L3	Q7Z443	1732 aa		29.45	■■■□□ 2.31
NECAB3-222	ENST00000607805	TOGARAM1	Q9Y4F4	1720 aa		29.45	■■■□□ 2.31
NECAB3-222	ENST00000607805	KIF24	Q5T7B8	1368 aa		29.45	■■■□□ 2.31
NECAB3-222	ENST00000607805	USHBP1	Q8N6Y0	703 aa		29.45	■■■□□ 2.31
NECAB3-222	ENST00000607805	SMG6	Q86US8	1419 aa	Known RBP	29.44	■■■□□ 2.3
NECAB3-222	ENST00000607805	HSP90AB2P	Q58FF8	381 aa		29.43	■■■□□ 2.3
NECAB3-222	ENST00000607805	FLT4	P35916	1363 aa		29.42	■■■□□ 2.3
NECAB3-222	ENST00000607805	CCNL1	Q9UK58	526 aa	Predicted RBP	29.42	■■■□□ 2.3
NECAB3-222	ENST00000607805	POLD1	P28340	1107 aa		29.41	■■■□□ 2.3
NECAB3-222	ENST00000607805	RAPGEF4	Q8WZA2	1011 aa		29.4	■■■□□ 2.3
NECAB3-222	ENST00000607805	NCAPD2	Q15021	1401 aa		29.39	■■■□□ 2.3
NECAB3-222	ENST00000607805	CARD14	Q9BXL6	1004 aa		29.39	■■■□□ 2.3
NECAB3-222	ENST00000607805	TAT	P17735	454 aa	Predicted RBP	29.38	■■■□□ 2.29
NECAB3-222	ENST00000607805	CDCA8	Q53HL2	280 aa		29.37	■■■□□ 2.29
NECAB3-222	ENST00000607805	PCDH11X	Q9BZA7	1347 aa		29.37	■■■□□ 2.29
NECAB3-222	ENST00000607805	PCDH11Y	Q9BZA8	1340 aa		29.37	■■■□□ 2.29
NECAB3-222	ENST00000607805	UBR3	Q6ZT12	1888 aa		29.36	■■■□□ 2.29
NECAB3-222	ENST00000607805	COL23A1	Q86Y22	540 aa	Predicted RBP	29.36	■■■□□ 2.29
NECAB3-222	ENST00000607805	GPR162	Q16538	588 aa		29.35	■■■□□ 2.29
NECAB3-222	ENST00000607805	CYP27B1	O15528	508 aa		29.34	■■■□□ 2.29
NECAB3-222	ENST00000607805	NLGN2	Q8NFZ4	835 aa		29.34	■■■□□ 2.29
NECAB3-222	ENST00000607805	C4B	P0C0L5	1744 aa		29.32	■■■□□ 2.28
NECAB3-222	ENST00000607805	NSD3	Q9BZ95	1437 aa		29.32	■■■□□ 2.28
NECAB3-222	ENST00000607805	EMILIN1	Q9Y6C2	1016 aa		29.32	■■■□□ 2.28
NECAB3-222	ENST00000607805	KLHL34	Q8N239	644 aa		29.31	■■■□□ 2.28
NECAB3-222	ENST00000607805	PALLD	Q8WX93	1383 aa		29.3	■■■□□ 2.28
NECAB3-222	ENST00000607805	TRIM26	Q12899	539 aa	Predicted RBP	29.3	■■■□□ 2.28
NECAB3-222	ENST00000607805	NKX1-1	Q15270	411 aa	Predicted RBP	29.26	■■■□□ 2.27
NECAB3-222	ENST00000607805	MPRIP	Q6WCQ1	1025 aa		29.26	■■■□□ 2.27
NECAB3-222	ENST00000607805	WASHC2A	Q641Q2	1341 aa		29.24	■■■□□ 2.27
NECAB3-222	ENST00000607805	HMGB2	P26583	209 aa	Known RBP	29.24	■■■□□ 2.27
NECAB3-222	ENST00000607805	MSH5	O43196	834 aa		29.23	■■■□□ 2.27
NECAB3-222	ENST00000607805	YBX3	P16989	372 aa	Known RBP eCLIP	29.23	■■■□□ 2.27
NECAB3-222	ENST00000607805	FLAD1	Q8NFF5	587 aa		29.23	■■■□□ 2.27
NECAB3-222	ENST00000607805	CEP350	Q5VT06	3117 aa		29.23	■■■□□ 2.27
NECAB3-222	ENST00000607805	C1QTNF8	P60827	252 aa		29.22	■■■□□ 2.27
NECAB3-222	ENST00000607805	MSL1	Q68DK7	614 aa		29.22	■■■□□ 2.27
NECAB3-222	ENST00000607805	PIGB	Q92521	554 aa		29.22	■■■□□ 2.27
NECAB3-222	ENST00000607805	TIMELESS	Q9UNS1	1208 aa		29.22	■■■□□ 2.27
NECAB3-222	ENST00000607805	AMIGO3	Q86WK7	504 aa		29.21	■■■□□ 2.27
NECAB3-222	ENST00000607805	SMARCC1	Q92922	1105 aa	Predicted RBP	29.21	■■■□□ 2.27
NECAB3-222	ENST00000607805	PELP1	Q8IZL8	1130 aa	Known RBP	29.2	■■■□□ 2.26
NECAB3-222	ENST00000607805	EYA1	Q99502	592 aa		29.2	■■■□□ 2.26
NECAB3-222	ENST00000607805	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	29.19	■■■□□ 2.26
NECAB3-222	ENST00000607805	POLK	Q9UBT6	870 aa		29.18	■■■□□ 2.26
NECAB3-222	ENST00000607805	GRIN3B	O60391	1043 aa		29.17	■■■□□ 2.26
NECAB3-222	ENST00000607805	CD2AP	Q9Y5K6	639 aa		29.17	■■■□□ 2.26
NECAB3-222	ENST00000607805	PPM1G	O15355	546 aa	Predicted RBP	29.16	■■■□□ 2.26
NECAB3-222	ENST00000607805	SPG7	Q9UQ90	795 aa		29.16	■■■□□ 2.26
NECAB3-222	ENST00000607805	ZNF831	Q5JPB2	1677 aa		29.14	■■■□□ 2.26
NECAB3-222	ENST00000607805	PLEKHG2	Q9H7P9	1386 aa		29.13	■■■□□ 2.25
NECAB3-222	ENST00000607805	AK7	Q96M32	723 aa		29.12	■■■□□ 2.25
NECAB3-222	ENST00000607805	LOC102724428	A0A0B4J2F2	783 aa		29.11	■■■□□ 2.25
NECAB3-222	ENST00000607805	PHKG2	P15735	406 aa		29.11	■■■□□ 2.25
NECAB3-222	ENST00000607805	SIK1	P57059	783 aa		29.11	■■■□□ 2.25
NECAB3-222	ENST00000607805	LINC00116	Q8NCU8	138 aa		29.11	■■■□□ 2.25
NECAB3-222	ENST00000607805	KIF13B	Q9NQT8	1826 aa		29.1	■■■□□ 2.25
NECAB3-222	ENST00000607805	SMIM5	Q71RC9	77 aa		29.1	■■■□□ 2.25
NECAB3-222	ENST00000607805	CLSPN	Q9HAW4	1339 aa		29.1	■■■□□ 2.25
NECAB3-222	ENST00000607805	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	29.09	■■■□□ 2.25
NECAB3-222	ENST00000607805	SSFA2	P28290	1259 aa		29.09	■■■□□ 2.25
NECAB3-222	ENST00000607805	IFNL2	Q8IZJ0	200 aa		29.09	■■■□□ 2.25
NECAB3-222	ENST00000607805	ASAP1	Q9ULH1	1129 aa		29.09	■■■□□ 2.25
NECAB3-222	ENST00000607805	SENP3-EIF4A1	A0A087X0R7	540 aa		29.08	■■■□□ 2.25
NECAB3-222	ENST00000607805	GIGYF1	O75420	1035 aa	Predicted RBP	29.08	■■■□□ 2.25
NECAB3-222	ENST00000607805	EIF4A2	Q14240	407 aa	Known RBP	29.08	■■■□□ 2.25
NECAB3-222	ENST00000607805	COL5A3	P25940	1745 aa	Predicted RBP	29.08	■■■□□ 2.25
NECAB3-222	ENST00000607805	ITPK1	Q13572	414 aa		29.07	■■■□□ 2.24
NECAB3-222	ENST00000607805	TMOD3	Q9NYL9	352 aa		29.07	■■■□□ 2.24
NECAB3-222	ENST00000607805	MYH14	Q7Z406	1995 aa	Known RBP	29.06	■■■□□ 2.24
NECAB3-222	ENST00000607805	KIAA1551	Q9HCM1	1747 aa		29.06	■■■□□ 2.24
NECAB3-222	ENST00000607805	PHF14	O94880	888 aa		29.05	■■■□□ 2.24
NECAB3-222	ENST00000607805	ATG3	Q9NT62	314 aa		29.04	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms