RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 MEGF6O75095 1541 aa30.42■■■□□ 2.46
TMEM248-207ENST00000607045 RTL1A6NKG5 1358 aa30.41■■■□□ 2.46
TMEM248-207ENST00000607045 UTRNP46939 3433 aa30.41■■■□□ 2.46
TMEM248-207ENST00000607045 AKT1S1Q96B36 256 aa30.41■■■□□ 2.46
TMEM248-207ENST00000607045 FHDC1Q9C0D6 1143 aaPredicted RBP30.41■■■□□ 2.46
TMEM248-207ENST00000607045 RGPD2P0DJD1 1756 aa30.41■■■□□ 2.46
TMEM248-207ENST00000607045 SYT17Q9BSW7 474 aa30.4■■■□□ 2.46
TMEM248-207ENST00000607045 SLC27A3Q5K4L6 730 aa30.39■■■□□ 2.46
TMEM248-207ENST00000607045 RAPGEF4Q8WZA2 1011 aa30.38■■■□□ 2.45
TMEM248-207ENST00000607045 FAM208AQ9UK61 1670 aaKnown RBP30.38■■■□□ 2.45
TMEM248-207ENST00000607045 EMILIN1Q9Y6C2 1016 aa30.37■■■□□ 2.45
TMEM248-207ENST00000607045 INSRP06213 1382 aa30.37■■■□□ 2.45
TMEM248-207ENST00000607045 NSD2O96028 1365 aa30.36■■■□□ 2.45
TMEM248-207ENST00000607045 TATP17735 454 aaPredicted RBP30.35■■■□□ 2.45
TMEM248-207ENST00000607045 PAPPAQ13219 1627 aa30.35■■■□□ 2.45
TMEM248-207ENST00000607045 NSD3Q9BZ95 1437 aa30.34■■■□□ 2.45
TMEM248-207ENST00000607045 ARXQ96QS3 562 aa30.34■■■□□ 2.45
TMEM248-207ENST00000607045 MYOM1P52179 1685 aa30.33■■■□□ 2.45
TMEM248-207ENST00000607045 CGNL1Q0VF96 1302 aa30.33■■■□□ 2.45
TMEM248-207ENST00000607045 FLT4P35916 1363 aa30.32■■■□□ 2.44
TMEM248-207ENST00000607045 PPM1GO15355 546 aaPredicted RBP30.32■■■□□ 2.44
TMEM248-207ENST00000607045 TFCP2L1Q9NZI6 479 aa30.32■■■□□ 2.44
TMEM248-207ENST00000607045 SMG6Q86US8 1419 aaKnown RBP30.31■■■□□ 2.44
TMEM248-207ENST00000607045 POLR3GLQ9BT43 218 aa30.31■■■□□ 2.44
TMEM248-207ENST00000607045 PNPLA7Q6ZV29 1317 aa30.3■■■□□ 2.44
TMEM248-207ENST00000607045 CLSPNQ9HAW4 1339 aa30.29■■■□□ 2.44
TMEM248-207ENST00000607045 CCNL1Q9UK58 526 aaPredicted RBP30.29■■■□□ 2.44
TMEM248-207ENST00000607045 KIF24Q5T7B8 1368 aa30.28■■■□□ 2.44
TMEM248-207ENST00000607045 CYP27B1O15528 508 aa30.27■■■□□ 2.44
TMEM248-207ENST00000607045 SLC16A10Q8TF71 515 aa30.27■■■□□ 2.44
TMEM248-207ENST00000607045 SHANK3Q9BYB0 1731 aa30.27■■■□□ 2.44
TMEM248-207ENST00000607045 MPRIPQ6WCQ1 1025 aa30.24■■■□□ 2.43
TMEM248-207ENST00000607045 PCDH11XQ9BZA7 1347 aa30.23■■■□□ 2.43
TMEM248-207ENST00000607045 PCDH11YQ9BZA8 1340 aa30.23■■■□□ 2.43
TMEM248-207ENST00000607045 DOT1LQ8TEK3 1739 aa30.23■■■□□ 2.43
TMEM248-207ENST00000607045 POLKQ9UBT6 870 aa30.23■■■□□ 2.43
TMEM248-207ENST00000607045 WASHC2AQ641Q2 1341 aa30.22■■■□□ 2.43
TMEM248-207ENST00000607045 KIF20BQ96Q89 1820 aa30.22■■■□□ 2.43
TMEM248-207ENST00000607045 EYA1Q99502 592 aa30.21■■■□□ 2.43
TMEM248-207ENST00000607045 GOLGB1Q14789 3259 aaKnown RBP30.2■■■□□ 2.43
TMEM248-207ENST00000607045 TNNT2P45379 298 aaPredicted RBP30.2■■■□□ 2.43
TMEM248-207ENST00000607045 COL23A1Q86Y22 540 aaPredicted RBP30.2■■■□□ 2.43
TMEM248-207ENST00000607045 HSPA5P11021 654 aaKnown RBP30.19■■■□□ 2.42
TMEM248-207ENST00000607045 POLD1P28340 1107 aa30.19■■■□□ 2.42
TMEM248-207ENST00000607045 MSH5O43196 834 aa30.18■■■□□ 2.42
TMEM248-207ENST00000607045 KLHL34Q8N239 644 aa30.18■■■□□ 2.42
TMEM248-207ENST00000607045 EIF4G2P78344 907 aaKnown RBP eCLIP30.16■■■□□ 2.42
TMEM248-207ENST00000607045 LY75O60449 1722 aa30.16■■■□□ 2.42
TMEM248-207ENST00000607045 PIGBQ92521 554 aa30.15■■■□□ 2.42
TMEM248-207ENST00000607045 PANK3Q9H999 370 aa30.15■■■□□ 2.42
TMEM248-207ENST00000607045 MAP3K5Q99683 1374 aa30.15■■■□□ 2.42
TMEM248-207ENST00000607045 NKX1-1Q15270 411 aaPredicted RBP30.14■■■□□ 2.42
TMEM248-207ENST00000607045 SPG7Q9UQ90 795 aa30.14■■■□□ 2.42
TMEM248-207ENST00000607045 PALLDQ8WX93 1383 aa30.13■■■□□ 2.41
TMEM248-207ENST00000607045 EIF4A2Q14240 407 aaKnown RBP30.11■■■□□ 2.41
TMEM248-207ENST00000607045 CCER1Q8TC90 406 aaPredicted RBP30.11■■■□□ 2.41
TMEM248-207ENST00000607045 NCAPD2Q15021 1401 aa30.11■■■□□ 2.41
TMEM248-207ENST00000607045 GPR162Q16538 588 aa30.1■■■□□ 2.41
TMEM248-207ENST00000607045 MSL1Q68DK7 614 aa30.09■■■□□ 2.41
TMEM248-207ENST00000607045 NLGN2Q8NFZ4 835 aa30.09■■■□□ 2.41
TMEM248-207ENST00000607045 ZNF784Q8NCA9 323 aaPredicted RBP30.08■■■□□ 2.41
TMEM248-207ENST00000607045 SMARCC1Q92922 1105 aaPredicted RBP30.08■■■□□ 2.41
TMEM248-207ENST00000607045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.08■■■□□ 2.41
TMEM248-207ENST00000607045 MAP2P11137 1827 aaKnown RBP30.08■■■□□ 2.41
TMEM248-207ENST00000607045 TUBGCP6Q96RT7 1819 aa30.08■■■□□ 2.41
TMEM248-207ENST00000607045 QSER1Q2KHR3 1735 aa30.08■■■□□ 2.41
TMEM248-207ENST00000607045 SMIM5Q71RC9 77 aa30.07■■■□□ 2.4
TMEM248-207ENST00000607045 AMIGO3Q86WK7 504 aa30.07■■■□□ 2.4
TMEM248-207ENST00000607045 PHKG2P15735 406 aa30.05■■■□□ 2.4
TMEM248-207ENST00000607045 IFNL2Q8IZJ0 200 aa30.05■■■□□ 2.4
TMEM248-207ENST00000607045 PELP1Q8IZL8 1130 aaKnown RBP30.05■■■□□ 2.4
TMEM248-207ENST00000607045 ASAP1Q9ULH1 1129 aa30.03■■■□□ 2.4
TMEM248-207ENST00000607045 FLAD1Q8NFF5 587 aa30.01■■■□□ 2.39
TMEM248-207ENST00000607045 TMOD3Q9NYL9 352 aa30.01■■■□□ 2.39
TMEM248-207ENST00000607045 COL24A1Q17RW2 1714 aa30.01■■■□□ 2.39
TMEM248-207ENST00000607045 TOGARAM1Q9Y4F4 1720 aa30.01■■■□□ 2.39
TMEM248-207ENST00000607045 LOC102724428A0A0B4J2F2 783 aa30■■■□□ 2.39
TMEM248-207ENST00000607045 HMGB2P26583 209 aaKnown RBP30■■■□□ 2.39
TMEM248-207ENST00000607045 SIK1P57059 783 aa30■■■□□ 2.39
TMEM248-207ENST00000607045 AK7Q96M32 723 aa30■■■□□ 2.39
TMEM248-207ENST00000607045 PKD1L3Q7Z443 1732 aa29.99■■■□□ 2.39
TMEM248-207ENST00000607045 ANKRD26Q9UPS8 1709 aa29.99■■■□□ 2.39
TMEM248-207ENST00000607045 LINC00116Q8NCU8 138 aa29.99■■■□□ 2.39
TMEM248-207ENST00000607045 ITGB4P16144 1822 aa29.98■■■□□ 2.39
TMEM248-207ENST00000607045 PHF14O94880 888 aa29.97■■■□□ 2.39
TMEM248-207ENST00000607045 ITPK1Q13572 414 aa29.97■■■□□ 2.39
TMEM248-207ENST00000607045 MORC1Q86VD1 984 aa29.97■■■□□ 2.39
TMEM248-207ENST00000607045 ATG3Q9NT62 314 aa29.97■■■□□ 2.39
TMEM248-207ENST00000607045 IGSF1Q8N6C5 1336 aa29.96■■■□□ 2.39
TMEM248-207ENST00000607045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.95■■■□□ 2.39
TMEM248-207ENST00000607045 YBX3P16989 372 aaKnown RBP eCLIP29.95■■■□□ 2.395e-9■□□□□ 9.5
TMEM248-207ENST00000607045 C5P01031 1676 aa29.95■■■□□ 2.38
TMEM248-207ENST00000607045 ATP6V1AP38606 617 aa29.94■■■□□ 2.38
TMEM248-207ENST00000607045 AEBP1Q8IUX7 1158 aa29.92■■■□□ 2.38
TMEM248-207ENST00000607045 TAF1LQ8IZX4 1826 aa29.92■■■□□ 2.38
TMEM248-207ENST00000607045 PLEKHO1Q53GL0 409 aaPredicted RBP29.91■■■□□ 2.38
TMEM248-207ENST00000607045 KNSTRNQ9Y448 316 aa29.91■■■□□ 2.38
TMEM248-207ENST00000607045 CD2APQ9Y5K6 639 aa29.9■■■□□ 2.38
TMEM248-207ENST00000607045 C4BP0C0L5 1744 aa29.9■■■□□ 2.38
TMEM248-207ENST00000607045 ERVV-2B6SEH9 535 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms