RNA–Protein interactions for RNA: ENST00000605881.5

TRIM49D1-203, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM49D1, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-203ENST00000605881 PEAK1Q9H792 1746 aa9.65□□□□□ -0.86
TRIM49D1-203ENST00000605881 USP6P35125 1406 aa9.65□□□□□ -0.87
TRIM49D1-203ENST00000605881 POTEB2H3BUK9 544 aa9.65□□□□□ -0.87
TRIM49D1-203ENST00000605881 RAB3GAP2Q9H2M9 1393 aa9.64□□□□□ -0.87
TRIM49D1-203ENST00000605881 SLC27A3Q5K4L6 730 aa9.64□□□□□ -0.87
TRIM49D1-203ENST00000605881 EVC2Q86UK5 1308 aa9.63□□□□□ -0.87
TRIM49D1-203ENST00000605881 LRRC37A3O60309 1634 aa9.63□□□□□ -0.87
TRIM49D1-203ENST00000605881 CPSF1Q10570 1443 aaKnown RBP9.63□□□□□ -0.87
TRIM49D1-203ENST00000605881 IL2RBP14784 551 aa9.63□□□□□ -0.87
TRIM49D1-203ENST00000605881 NLRP2Q9NX02 1062 aa9.63□□□□□ -0.87
TRIM49D1-203ENST00000605881 TFCP2L1Q9NZI6 479 aa9.63□□□□□ -0.87
TRIM49D1-203ENST00000605881 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
TRIM49D1-203ENST00000605881 ARHGEF28Q8N1W1 1705 aaKnown RBP9.62□□□□□ -0.87
TRIM49D1-203ENST00000605881 SLIT3O75094 1523 aa9.62□□□□□ -0.87
TRIM49D1-203ENST00000605881 TTC21BQ7Z4L5 1316 aa9.62□□□□□ -0.87
TRIM49D1-203ENST00000605881 TOPAZ1Q8N9V7 1692 aa9.62□□□□□ -0.87
TRIM49D1-203ENST00000605881 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
TRIM49D1-203ENST00000605881 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
TRIM49D1-203ENST00000605881 TNS2Q63HR2 1409 aa9.61□□□□□ -0.87
TRIM49D1-203ENST00000605881 SBF2Q86WG5 1849 aa9.6□□□□□ -0.87
TRIM49D1-203ENST00000605881 ZNF827Q17R98 1081 aa9.6□□□□□ -0.87
TRIM49D1-203ENST00000605881 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
TRIM49D1-203ENST00000605881 CHD4Q14839 1912 aa9.6□□□□□ -0.87
TRIM49D1-203ENST00000605881 LRRC4BQ9NT99 713 aa9.59□□□□□ -0.87
TRIM49D1-203ENST00000605881 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
TRIM49D1-203ENST00000605881 DDX54Q8TDD1 881 aaKnown RBP9.58□□□□□ -0.88
TRIM49D1-203ENST00000605881 SYTL4Q96C24 671 aaPredicted RBP9.58□□□□□ -0.88
TRIM49D1-203ENST00000605881 PNPLA7Q6ZV29 1317 aa9.57□□□□□ -0.88
TRIM49D1-203ENST00000605881 HSPA6P17066 643 aa9.57□□□□□ -0.88
TRIM49D1-203ENST00000605881 NLGN2Q8NFZ4 835 aa9.57□□□□□ -0.88
TRIM49D1-203ENST00000605881 ANKRD24Q8TF21 1146 aa9.57□□□□□ -0.88
TRIM49D1-203ENST00000605881 AKAP12Q02952 1782 aa9.57□□□□□ -0.88
TRIM49D1-203ENST00000605881 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
TRIM49D1-203ENST00000605881 ERBB3P21860 1342 aa9.57□□□□□ -0.88
TRIM49D1-203ENST00000605881 YBX3P16989 372 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRIM49D1-203ENST00000605881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRIM49D1-203ENST00000605881 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
TRIM49D1-203ENST00000605881 COL18A1P39060 1754 aa9.55□□□□□ -0.88
TRIM49D1-203ENST00000605881 FLAD1Q8NFF5 587 aa9.55□□□□□ -0.88
TRIM49D1-203ENST00000605881 CCNL1Q9UK58 526 aaPredicted RBP9.55□□□□□ -0.88
TRIM49D1-203ENST00000605881 CD2APQ9Y5K6 639 aa9.55□□□□□ -0.88
TRIM49D1-203ENST00000605881 ABCC6O95255 1503 aa9.55□□□□□ -0.88
TRIM49D1-203ENST00000605881 KIAA1210Q9ULL0 1709 aa9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 ATP10DQ9P241 1426 aa9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 NHSQ6T4R5 1651 aa9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 FKBP8Q14318 412 aa9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 HDGFL2Q7Z4V5 671 aaPredicted RBP9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 ZNF526Q8TF50 670 aaPredicted RBP9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 CREBZFQ9NS37 354 aa9.54□□□□□ -0.88
TRIM49D1-203ENST00000605881 TRPM1Q7Z4N2 1603 aa9.53□□□□□ -0.88
TRIM49D1-203ENST00000605881 PIK3C2AO00443 1686 aa9.53□□□□□ -0.88
TRIM49D1-203ENST00000605881 WNK3Q9BYP7 1800 aa9.53□□□□□ -0.88
TRIM49D1-203ENST00000605881 QRICH2Q9H0J4 1663 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 KCNQ4P56696 695 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 PAPPAQ13219 1627 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 UTRNP46939 3433 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 USP31Q70CQ4 1352 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 ANKRD36BQ8N2N9 1353 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 USP47Q96K76 1375 aa9.52□□□□□ -0.89
TRIM49D1-203ENST00000605881 APLP1P51693 650 aa9.51□□□□□ -0.89
TRIM49D1-203ENST00000605881 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
TRIM49D1-203ENST00000605881 NME9Q86XW9 330 aa9.51□□□□□ -0.89
TRIM49D1-203ENST00000605881 COL23A1Q86Y22 540 aaPredicted RBP9.51□□□□□ -0.89
TRIM49D1-203ENST00000605881 ZCRB1Q8TBF4 217 aaKnown RBP9.51□□□□□ -0.89
TRIM49D1-203ENST00000605881 IP6K1Q92551 441 aa9.51□□□□□ -0.89
TRIM49D1-203ENST00000605881 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
TRIM49D1-203ENST00000605881 SHANK3Q9BYB0 1731 aa9.5□□□□□ -0.89
TRIM49D1-203ENST00000605881 TERF2IPQ9NYB0 399 aa9.5□□□□□ -0.89
TRIM49D1-203ENST00000605881 NFAT5O94916 1531 aa9.5□□□□□ -0.89
TRIM49D1-203ENST00000605881 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
TRIM49D1-203ENST00000605881 AMPHP49418 695 aa9.48□□□□□ -0.89
TRIM49D1-203ENST00000605881 BTAF1O14981 1849 aa9.48□□□□□ -0.89
TRIM49D1-203ENST00000605881 RAPGEF4Q8WZA2 1011 aa9.48□□□□□ -0.89
TRIM49D1-203ENST00000605881 L3MBTL2Q969R5 705 aa9.48□□□□□ -0.89
TRIM49D1-203ENST00000605881 AK7Q96M32 723 aa9.48□□□□□ -0.89
TRIM49D1-203ENST00000605881 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
TRIM49D1-203ENST00000605881 RGPD5Q99666 1765 aa9.47□□□□□ -0.89
TRIM49D1-203ENST00000605881 CGNL1Q0VF96 1302 aa9.47□□□□□ -0.89
TRIM49D1-203ENST00000605881 SMARCC1Q92922 1105 aaPredicted RBP9.47□□□□□ -0.89
TRIM49D1-203ENST00000605881 COG3Q96JB2 828 aa9.47□□□□□ -0.89
TRIM49D1-203ENST00000605881 IGSF1Q8N6C5 1336 aa9.46□□□□□ -0.89
TRIM49D1-203ENST00000605881 ADCY9O60503 1353 aa9.46□□□□□ -0.9
TRIM49D1-203ENST00000605881 TOMM70O94826 608 aa9.46□□□□□ -0.9
TRIM49D1-203ENST00000605881 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.9
TRIM49D1-203ENST00000605881 METRNQ9UJH8 293 aa9.46□□□□□ -0.9
TRIM49D1-203ENST00000605881 QSER1Q2KHR3 1735 aa9.46□□□□□ -0.9
TRIM49D1-203ENST00000605881 EDC4Q6P2E9 1401 aaKnown RBP9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 KAT6BQ8WYB5 2073 aa9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 SBNO2Q9Y2G9 1366 aa9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 KIF3CO14782 793 aa9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 HOXC9P31274 260 aa9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 MAMSTRQ6ZN01 415 aa9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 C16orf71Q8IYS4 520 aaPredicted RBP9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 NSD3Q9BZ95 1437 aa9.45□□□□□ -0.9
TRIM49D1-203ENST00000605881 MPRIPQ6WCQ1 1025 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms