RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 C14orf93Q9H972 538 aaKnown RBP15.12■□□□□ 0.01
CDCA3-212ENST00000604599 FKBP5Q13451 457 aaPredicted RBP15.12■□□□□ 0.01
CDCA3-212ENST00000604599 TULP4Q9NRJ4 1543 aa15.12■□□□□ 0.01
CDCA3-212ENST00000604599 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
CDCA3-212ENST00000604599 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
CDCA3-212ENST00000604599 PHF14O94880 888 aa15.1■□□□□ 0.01
CDCA3-212ENST00000604599 LETM1O95202 739 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-212ENST00000604599 HCLS1P14317 486 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-212ENST00000604599 U2AF2P26368 475 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDCA3-212ENST00000604599 TCHHQ07283 1943 aa15.1■□□□□ 0.01
CDCA3-212ENST00000604599 CFAP65Q6ZU64 1925 aaKnown RBP15.1■□□□□ 0.01
CDCA3-212ENST00000604599 LRRC7Q96NW7 1537 aa15.1■□□□□ 0.01
CDCA3-212ENST00000604599 ERC2O15083 957 aa15.1■□□□□ 0.01
CDCA3-212ENST00000604599 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
CDCA3-212ENST00000604599 TWISTNBQ3B726 338 aaPredicted RBP15.1■□□□□ 0.01
CDCA3-212ENST00000604599 HMOX1P09601 288 aa15.09■□□□□ 0.01
CDCA3-212ENST00000604599 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
CDCA3-212ENST00000604599 FYB1O15117 783 aa15.09■□□□□ 0.01
CDCA3-212ENST00000604599 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
CDCA3-212ENST00000604599 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
CDCA3-212ENST00000604599 PHACTR3Q96KR7 559 aa15.09■□□□□ 0.01
CDCA3-212ENST00000604599 FAM184AQ8NB25 1140 aa15.08■□□□□ 0
CDCA3-212ENST00000604599 BBXQ8WY36 941 aaPredicted RBP15.08■□□□□ 0
CDCA3-212ENST00000604599 SPTLC3Q9NUV7 552 aa15.08■□□□□ 0
CDCA3-212ENST00000604599 RIOK3O14730 519 aaKnown RBP15.08■□□□□ 0
CDCA3-212ENST00000604599 FBLN1P23142 703 aa15.08■□□□□ 0
CDCA3-212ENST00000604599 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
CDCA3-212ENST00000604599 C8orf58Q8NAV2 365 aa15.07■□□□□ 0
CDCA3-212ENST00000604599 FCHSD2O94868 740 aa15.06■□□□□ 0
CDCA3-212ENST00000604599 UVSSAQ2YD98 709 aa15.06■□□□□ 0
CDCA3-212ENST00000604599 ANKRD44Q8N8A2 993 aa15.06■□□□□ 0
CDCA3-212ENST00000604599 PALD1Q9ULE6 856 aa15.06■□□□□ 0
CDCA3-212ENST00000604599 ADGRB3O60242 1522 aa15.06■□□□□ 0
CDCA3-212ENST00000604599 EFCAB6Q5THR3 1501 aa15.06■□□□□ 0
CDCA3-212ENST00000604599 ATP10DQ9P241 1426 aa15.05■□□□□ 0
CDCA3-212ENST00000604599 GNAI1P63096 354 aa15.05■□□□□ 0
CDCA3-212ENST00000604599 CHAF1AQ13111 956 aaPredicted RBP15.05■□□□□ 0
CDCA3-212ENST00000604599 PYCARDQ9ULZ3 195 aa15.05■□□□□ 0
CDCA3-212ENST00000604599 MROH1Q8NDA8 1641 aa15.05■□□□□ -0
CDCA3-212ENST00000604599 ATP7AQ04656 1500 aa15.05■□□□□ -0
CDCA3-212ENST00000604599 CUL4AQ13619 759 aa15.05■□□□□ -0
CDCA3-212ENST00000604599 NFE2L2Q16236 605 aa15.05■□□□□ -0
CDCA3-212ENST00000604599 TSHZ3Q63HK5 1081 aa15.05■□□□□ -0
CDCA3-212ENST00000604599 UPF3BQ9BZI7 483 aaKnown RBP15.05■□□□□ -0
CDCA3-212ENST00000604599 GLI2P10070 1586 aa15.04■□□□□ -0
CDCA3-212ENST00000604599 FAM135BQ49AJ0 1406 aa15.04■□□□□ -0
CDCA3-212ENST00000604599 CEP85Q6P2H3 762 aa15.04■□□□□ -0
CDCA3-212ENST00000604599 CCDC183Q5T5S1 534 aa15.04■□□□□ -0
CDCA3-212ENST00000604599 SPC24Q8NBT2 197 aa15.04■□□□□ -0
CDCA3-212ENST00000604599 DIAPH3Q9NSV4 1193 aa15.04■□□□□ -0
CDCA3-212ENST00000604599 PPLO60437 1756 aa15.04■□□□□ -0
CDCA3-212ENST00000604599 KRT24Q2M2I5 525 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 KCNF1Q9H3M0 494 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 IFT57Q9NWB7 429 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 STK26Q9P289 416 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 GTF2E1P29083 439 aaPredicted RBP15.03■□□□□ -0
CDCA3-212ENST00000604599 KIAA1524Q8TCG1 905 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 ARHGEF28Q8N1W1 1705 aaKnown RBP15.03■□□□□ -0
CDCA3-212ENST00000604599 KDM4AO75164 1064 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 MCM2P49736 904 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 ZNF771Q7L3S4 317 aaPredicted RBP15.03■□□□□ -0
CDCA3-212ENST00000604599 ANKRD7Q92527 254 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 CNPY2Q9Y2B0 182 aa15.03■□□□□ -0
CDCA3-212ENST00000604599 PUS7Q96PZ0 661 aaKnown RBP15.02■□□□□ -0
CDCA3-212ENST00000604599 CGNQ9P2M7 1197 aaKnown RBP15.02■□□□□ -0
CDCA3-212ENST00000604599 SRCIN1Q9C0H9 1055 aa15.02□□□□□ -0.01
CDCA3-212ENST00000604599 ANO2Q9NQ90 1003 aa15.02□□□□□ -0.01
CDCA3-212ENST00000604599 AP5Z1O43299 807 aa15.01□□□□□ -0.01
CDCA3-212ENST00000604599 RPAP2Q8IXW5 612 aaPredicted RBP15.01□□□□□ -0.01
CDCA3-212ENST00000604599 INTS4Q96HW7 963 aaKnown RBP15.01□□□□□ -0.01
CDCA3-212ENST00000604599 PNPLA6Q8IY17 1366 aa15.01□□□□□ -0.01
CDCA3-212ENST00000604599 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
CDCA3-212ENST00000604599 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
CDCA3-212ENST00000604599 MX1P20591 662 aa15.01□□□□□ -0.01
CDCA3-212ENST00000604599 MEIS3Q99687 375 aa15.01□□□□□ -0.01
CDCA3-212ENST00000604599 WDR33Q9C0J8 1336 aaKnown RBP15.01□□□□□ -0.01
CDCA3-212ENST00000604599 MSH6P52701 1360 aa15.01□□□□□ -0.01
CDCA3-212ENST00000604599 GIMAP6Q6P9H5 292 aa15□□□□□ -0.01
CDCA3-212ENST00000604599 TERF2IPQ9NYB0 399 aa15□□□□□ -0.01
CDCA3-212ENST00000604599 ZNF853P0CG23 659 aa15□□□□□ -0.01
CDCA3-212ENST00000604599 PDE1AP54750 535 aa15□□□□□ -0.01
CDCA3-212ENST00000604599 DCTN1Q14203 1278 aa15□□□□□ -0.01
CDCA3-212ENST00000604599 CAMSAP1Q5T5Y3 1602 aa15□□□□□ -0.01
CDCA3-212ENST00000604599 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
CDCA3-212ENST00000604599 MCCP23508 829 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 ERCC6L2Q5T890 1561 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 FANCAO15360 1455 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 YEATS2Q9ULM3 1422 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 FIBPO43427 364 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 ESYT1Q9BSJ8 1104 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 ANKRD26Q9UPS8 1709 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 RTL1A6NKG5 1358 aa14.99□□□□□ -0.01
CDCA3-212ENST00000604599 CTIFO43310 598 aaKnown RBP14.98□□□□□ -0.01
CDCA3-212ENST00000604599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDCA3-212ENST00000604599 ZCCHC11Q5TAX3 1644 aaKnown RBP14.98□□□□□ -0.01
CDCA3-212ENST00000604599 ZBTB22O15209 634 aa14.98□□□□□ -0.01
CDCA3-212ENST00000604599 NCBP1Q09161 790 aaKnown RBP14.98□□□□□ -0.01
CDCA3-212ENST00000604599 RILPL2Q969X0 211 aa14.97□□□□□ -0.01
CDCA3-212ENST00000604599 BCL11BQ9C0K0 894 aaPredicted RBP14.97□□□□□ -0.01
CDCA3-212ENST00000604599 KIF24Q5T7B8 1368 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms