RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 NFE2L2Q16236 605 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
HCG18-242ENST00000602319 PRIMPOLQ96LW4 560 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 RGPD1P0DJD0 1748 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 PRPF40AO75400 957 aaKnown RBP12.13□□□□□ -0.47
HCG18-242ENST00000602319 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 RTL1A6NKG5 1358 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
HCG18-242ENST00000602319 ST18O60284 1047 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 HMGN5P82970 282 aaKnown RBP12.13□□□□□ -0.47
HCG18-242ENST00000602319 POGZQ7Z3K3 1410 aa12.13□□□□□ -0.47
HCG18-242ENST00000602319 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
HCG18-242ENST00000602319 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
HCG18-242ENST00000602319 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
HCG18-242ENST00000602319 SPTLC3Q9NUV7 552 aa12.12□□□□□ -0.47
HCG18-242ENST00000602319 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
HCG18-242ENST00000602319 OSBPL3Q9H4L5 887 aa12.12□□□□□ -0.47
HCG18-242ENST00000602319 C3P01024 1663 aa12.12□□□□□ -0.47
HCG18-242ENST00000602319 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 SYCE3A1L190 88 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
HCG18-242ENST00000602319 GNAI1P63096 354 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 TMEM87AQ8NBN3 555 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
HCG18-242ENST00000602319 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
HCG18-242ENST00000602319 XRN1Q8IZH2 1706 aaKnown RBP12.11□□□□□ -0.47
HCG18-242ENST00000602319 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
HCG18-242ENST00000602319 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
HCG18-242ENST00000602319 KIAA0232Q92628 1395 aa12.1□□□□□ -0.47
HCG18-242ENST00000602319 SDSP20132 328 aa12.1□□□□□ -0.47
HCG18-242ENST00000602319 TSPY26PQ9H489 355 aa12.1□□□□□ -0.47
HCG18-242ENST00000602319 MBIPQ9NS73 344 aa12.1□□□□□ -0.47
HCG18-242ENST00000602319 MCM2P49736 904 aa12.09□□□□□ -0.47
HCG18-242ENST00000602319 ALKQ9UM73 1620 aa12.09□□□□□ -0.47
HCG18-242ENST00000602319 SALL3Q9BXA9 1300 aa12.09□□□□□ -0.47
HCG18-242ENST00000602319 RPAP1Q9BWH6 1393 aaPredicted RBP12.09□□□□□ -0.47
HCG18-242ENST00000602319 FAM208AQ9UK61 1670 aaKnown RBP12.09□□□□□ -0.47
HCG18-242ENST00000602319 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
HCG18-242ENST00000602319 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
HCG18-242ENST00000602319 FAM184AQ8NB25 1140 aa12.08□□□□□ -0.48
HCG18-242ENST00000602319 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
HCG18-242ENST00000602319 DIP2CQ9Y2E4 1556 aa12.08□□□□□ -0.48
HCG18-242ENST00000602319 REC8O95072 547 aa12.08□□□□□ -0.48
HCG18-242ENST00000602319 NALCNQ8IZF0 1738 aa12.08□□□□□ -0.48
HCG18-242ENST00000602319 NCLP19338 710 aaKnown RBP12.08□□□□□ -0.48
HCG18-242ENST00000602319 PRKAR2BP31323 418 aa12.08□□□□□ -0.48
HCG18-242ENST00000602319 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
HCG18-242ENST00000602319 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
HCG18-242ENST00000602319 CHD2O14647 1828 aaKnown RBP12.07□□□□□ -0.48
HCG18-242ENST00000602319 ERC2O15083 957 aa12.07□□□□□ -0.48
HCG18-242ENST00000602319 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
HCG18-242ENST00000602319 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
HCG18-242ENST00000602319 LRRC37A3O60309 1634 aa12.07□□□□□ -0.48
HCG18-242ENST00000602319 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
HCG18-242ENST00000602319 PLPPR3Q6T4P5 718 aa12.07□□□□□ -0.48
HCG18-242ENST00000602319 TCHHQ07283 1943 aa12.07□□□□□ -0.48
HCG18-242ENST00000602319 ANAPC15P60006 121 aa12.06□□□□□ -0.48
HCG18-242ENST00000602319 TWISTNBQ3B726 338 aaPredicted RBP12.06□□□□□ -0.48
HCG18-242ENST00000602319 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
HCG18-242ENST00000602319 C16orf71Q8IYS4 520 aaPredicted RBP12.06□□□□□ -0.48
HCG18-242ENST00000602319 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
HCG18-242ENST00000602319 EPB41L2O43491 1005 aaKnown RBP12.06□□□□□ -0.48
HCG18-242ENST00000602319 SYAP1Q96A49 352 aaPredicted RBP12.06□□□□□ -0.48
HCG18-242ENST00000602319 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
HCG18-242ENST00000602319 POLKQ9UBT6 870 aa12.06□□□□□ -0.48
HCG18-242ENST00000602319 IL13P35225 146 aa12.06□□□□□ -0.48
HCG18-242ENST00000602319 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
HCG18-242ENST00000602319 MSH6P52701 1360 aa12.05□□□□□ -0.48
HCG18-242ENST00000602319 PHF14O94880 888 aa12.05□□□□□ -0.48
HCG18-242ENST00000602319 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
HCG18-242ENST00000602319 ANKRD7Q92527 254 aa12.04□□□□□ -0.48
HCG18-242ENST00000602319 SPATA31D1Q6ZQQ2 1576 aa12.04□□□□□ -0.48
HCG18-242ENST00000602319 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
HCG18-242ENST00000602319 CHAMP1Q96JM3 812 aa12.04□□□□□ -0.48
HCG18-242ENST00000602319 FUCA2Q9BTY2 467 aa12.04□□□□□ -0.48
HCG18-242ENST00000602319 RICTORQ6R327 1708 aa12.03□□□□□ -0.48
HCG18-242ENST00000602319 NOLC1Q14978 699 aaKnown RBP eCLIP12.03□□□□□ -0.48
HCG18-242ENST00000602319 PTPRCP08575 1304 aa12.03□□□□□ -0.48
HCG18-242ENST00000602319 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
HCG18-242ENST00000602319 KIF20AO95235 890 aa12.03□□□□□ -0.48
HCG18-242ENST00000602319 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.48
HCG18-242ENST00000602319 ARHGEF10O15013 1369 aa12.02□□□□□ -0.48
HCG18-242ENST00000602319 CTIFO43310 598 aaKnown RBP12.02□□□□□ -0.49
HCG18-242ENST00000602319 CACNA1FO60840 1977 aa12.02□□□□□ -0.49
HCG18-242ENST00000602319 LETM1O95202 739 aaPredicted RBP12.01□□□□□ -0.49
HCG18-242ENST00000602319 TOPAZ1Q8N9V7 1692 aa12.01□□□□□ -0.49
HCG18-242ENST00000602319 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
HCG18-242ENST00000602319 ESYT1Q9BSJ8 1104 aa12.01□□□□□ -0.49
HCG18-242ENST00000602319 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
HCG18-242ENST00000602319 CCDC183Q5T5S1 534 aa12.01□□□□□ -0.49
HCG18-242ENST00000602319 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
HCG18-242ENST00000602319 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
HCG18-242ENST00000602319 PEAK1Q9H792 1746 aa12□□□□□ -0.49
HCG18-242ENST00000602319 SYCP1Q15431 976 aa12□□□□□ -0.49
HCG18-242ENST00000602319 PDE1AP54750 535 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms