RNA–Protein interactions for RNA: ENST00000602061.5

SYMPK-218, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-218ENST00000602061 CHD4Q14839 1912 aa17.82■□□□□ 0.44
SYMPK-218ENST00000602061 PRIM1P49642 420 aaKnown RBP17.82■□□□□ 0.44
SYMPK-218ENST00000602061 QSER1Q2KHR3 1735 aa17.81■□□□□ 0.44
SYMPK-218ENST00000602061 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
SYMPK-218ENST00000602061 ST20-MTHFSA0A0A6YYL1 179 aa17.81■□□□□ 0.44
SYMPK-218ENST00000602061 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
SYMPK-218ENST00000602061 USP47Q96K76 1375 aa17.8■□□□□ 0.44
SYMPK-218ENST00000602061 MSH5O43196 834 aa17.8■□□□□ 0.44
SYMPK-218ENST00000602061 RAPGEF4Q8WZA2 1011 aa17.8■□□□□ 0.44
SYMPK-218ENST00000602061 CGNL1Q0VF96 1302 aa17.79■□□□□ 0.44
SYMPK-218ENST00000602061 MEGF6O75095 1541 aa17.79■□□□□ 0.44
SYMPK-218ENST00000602061 HMGB2P26583 209 aaKnown RBP17.79■□□□□ 0.44
SYMPK-218ENST00000602061 TESK2Q96S53 571 aa17.79■□□□□ 0.44
SYMPK-218ENST00000602061 SENP3-EIF4A1A0A087X0R7 540 aa17.77■□□□□ 0.44
SYMPK-218ENST00000602061 KCNQ4P56696 695 aa17.77■□□□□ 0.44
SYMPK-218ENST00000602061 TMF1P82094 1093 aa17.77■□□□□ 0.44
SYMPK-218ENST00000602061 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.44
SYMPK-218ENST00000602061 NSD2O96028 1365 aa17.77■□□□□ 0.43
SYMPK-218ENST00000602061 TATP17735 454 aaPredicted RBP17.76■□□□□ 0.43
SYMPK-218ENST00000602061 LY75O60449 1722 aa17.75■□□□□ 0.43
SYMPK-218ENST00000602061 PCDH11XQ9BZA7 1347 aa17.75■□□□□ 0.43
SYMPK-218ENST00000602061 PCDH11YQ9BZA8 1340 aa17.75■□□□□ 0.43
SYMPK-218ENST00000602061 FBLN1P23142 703 aa17.75■□□□□ 0.43
SYMPK-218ENST00000602061 CDCA8Q53HL2 280 aa17.75■□□□□ 0.43
SYMPK-218ENST00000602061 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
SYMPK-218ENST00000602061 TUBGCP6Q96RT7 1819 aa17.75■□□□□ 0.43
SYMPK-218ENST00000602061 NBPF6Q5VWK0 638 aa17.74■□□□□ 0.43
SYMPK-218ENST00000602061 NBPF4Q96M43 638 aa17.74■□□□□ 0.43
SYMPK-218ENST00000602061 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
SYMPK-218ENST00000602061 SHANK3Q9BYB0 1731 aa17.74■□□□□ 0.43
SYMPK-218ENST00000602061 RGPD2P0DJD1 1756 aa17.74■□□□□ 0.43
SYMPK-218ENST00000602061 GIGYF1O75420 1035 aaPredicted RBP17.73■□□□□ 0.43
SYMPK-218ENST00000602061 C1QTNF8P60827 252 aa17.73■□□□□ 0.43
SYMPK-218ENST00000602061 FLT4P35916 1363 aa17.73■□□□□ 0.43
SYMPK-218ENST00000602061 GRIN3BO60391 1043 aa17.72■□□□□ 0.43
SYMPK-218ENST00000602061 UTRNP46939 3433 aa17.71■□□□□ 0.43
SYMPK-218ENST00000602061 INSRP06213 1382 aa17.71■□□□□ 0.43
SYMPK-218ENST00000602061 FYB1O15117 783 aa17.71■□□□□ 0.43
SYMPK-218ENST00000602061 NLGN2Q8NFZ4 835 aa17.71■□□□□ 0.43
SYMPK-218ENST00000602061 COL24A1Q17RW2 1714 aa17.71■□□□□ 0.43
SYMPK-218ENST00000602061 KIF24Q5T7B8 1368 aa17.7■□□□□ 0.42
SYMPK-218ENST00000602061 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
SYMPK-218ENST00000602061 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
SYMPK-218ENST00000602061 FLAD1Q8NFF5 587 aa17.7■□□□□ 0.42
SYMPK-218ENST00000602061 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
SYMPK-218ENST00000602061 KIF20BQ96Q89 1820 aa17.69■□□□□ 0.42
SYMPK-218ENST00000602061 C5P01031 1676 aa17.68■□□□□ 0.42
SYMPK-218ENST00000602061 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
SYMPK-218ENST00000602061 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
SYMPK-218ENST00000602061 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
SYMPK-218ENST00000602061 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
SYMPK-218ENST00000602061 AK7Q96M32 723 aa17.67■□□□□ 0.42
SYMPK-218ENST00000602061 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
SYMPK-218ENST00000602061 YBX3P16989 372 aaKnown RBP eCLIP17.63■□□□□ 0.414e-8■□□□□ 9.5
SYMPK-218ENST00000602061 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
SYMPK-218ENST00000602061 CD2APQ9Y5K6 639 aa17.63■□□□□ 0.41
SYMPK-218ENST00000602061 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
SYMPK-218ENST00000602061 CYP27B1O15528 508 aa17.61■□□□□ 0.41
SYMPK-218ENST00000602061 PHF14O94880 888 aa17.61■□□□□ 0.41
SYMPK-218ENST00000602061 C4BP0C0L5 1744 aa17.61■□□□□ 0.41
SYMPK-218ENST00000602061 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
SYMPK-218ENST00000602061 TAF1LQ8IZX4 1826 aa17.59■□□□□ 0.41
SYMPK-218ENST00000602061 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
SYMPK-218ENST00000602061 TMOD3Q9NYL9 352 aa17.59■□□□□ 0.41
SYMPK-218ENST00000602061 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.41
SYMPK-218ENST00000602061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.57■□□□□ 0.4
SYMPK-218ENST00000602061 SSFA2P28290 1259 aa17.57■□□□□ 0.4
SYMPK-218ENST00000602061 PIGBQ92521 554 aa17.57■□□□□ 0.4
SYMPK-218ENST00000602061 GPBP1L1Q9HC44 474 aaPredicted RBP17.57■□□□□ 0.4
SYMPK-218ENST00000602061 ITGB4P16144 1822 aa17.56■□□□□ 0.4
SYMPK-218ENST00000602061 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
SYMPK-218ENST00000602061 SIK1P57059 783 aa17.56■□□□□ 0.4
SYMPK-218ENST00000602061 CARD14Q9BXL6 1004 aa17.56■□□□□ 0.4
SYMPK-218ENST00000602061 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
SYMPK-218ENST00000602061 WASHC2AQ641Q2 1341 aa17.55■□□□□ 0.4
SYMPK-218ENST00000602061 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
SYMPK-218ENST00000602061 GOLGB1Q14789 3259 aaKnown RBP17.55■□□□□ 0.4
SYMPK-218ENST00000602061 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
SYMPK-218ENST00000602061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
SYMPK-218ENST00000602061 GNPATO15228 680 aa17.54■□□□□ 0.4
SYMPK-218ENST00000602061 IFNL2Q8IZJ0 200 aa17.54■□□□□ 0.4
SYMPK-218ENST00000602061 POLR3GLQ9BT43 218 aa17.54■□□□□ 0.4
SYMPK-218ENST00000602061 ANKRD26Q9UPS8 1709 aa17.54■□□□□ 0.4
SYMPK-218ENST00000602061 UBR3Q6ZT12 1888 aa17.53■□□□□ 0.4
SYMPK-218ENST00000602061 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
SYMPK-218ENST00000602061 EYA1Q99502 592 aa17.53■□□□□ 0.4
SYMPK-218ENST00000602061 LINC00116Q8NCU8 138 aa17.52■□□□□ 0.4
SYMPK-218ENST00000602061 ZNF526Q8TF50 670 aaPredicted RBP17.52■□□□□ 0.4
SYMPK-218ENST00000602061 PHKG2P15735 406 aa17.51■□□□□ 0.39
SYMPK-218ENST00000602061 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
SYMPK-218ENST00000602061 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
SYMPK-218ENST00000602061 PLEKHG2Q9H7P9 1386 aa17.51■□□□□ 0.39
SYMPK-218ENST00000602061 AMIGO3Q86WK7 504 aa17.5■□□□□ 0.39
SYMPK-218ENST00000602061 TNNT2P45379 298 aaPredicted RBP17.49■□□□□ 0.39
SYMPK-218ENST00000602061 ASAP1Q9ULH1 1129 aa17.49■□□□□ 0.39
SYMPK-218ENST00000602061 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
SYMPK-218ENST00000602061 ADCY9O60503 1353 aa17.49■□□□□ 0.39
SYMPK-218ENST00000602061 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
SYMPK-218ENST00000602061 SMIM5Q71RC9 77 aa17.48■□□□□ 0.39
SYMPK-218ENST00000602061 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms