RNA–Protein interactions for RNA: ENST00000601729.1

AC006539.2-201, humanhuman

BASIC

Gene AC006539.2, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.2-201ENST00000601729 UPP2O95045 317 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 GNRH1P01148 92 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 SCTRP47872 440 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 RAB15P59190 212 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 SCARF1Q14162 830 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 USP17L2Q6R6M4 530 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 KIFC2Q96AC6 838 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
AC006539.2-201ENST00000601729 PTGIRP43119 386 aa8.38□□□□□ -1.07
AC006539.2-201ENST00000601729 CBLBQ13191 982 aa8.38□□□□□ -1.07
AC006539.2-201ENST00000601729 TRIM50Q86XT4 487 aa8.38□□□□□ -1.07
AC006539.2-201ENST00000601729 TFIP11Q9UBB9 837 aaKnown RBP8.38□□□□□ -1.07
AC006539.2-201ENST00000601729 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
AC006539.2-201ENST00000601729 ATP5J2-PTCD1G3V325 749 aa8.37□□□□□ -1.07
AC006539.2-201ENST00000601729 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
AC006539.2-201ENST00000601729 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
AC006539.2-201ENST00000601729 GPC1P35052 558 aa8.36□□□□□ -1.07
AC006539.2-201ENST00000601729 CLN3Q13286 438 aa8.36□□□□□ -1.07
AC006539.2-201ENST00000601729 NCOA4Q13772 614 aa8.36□□□□□ -1.07
AC006539.2-201ENST00000601729 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
AC006539.2-201ENST00000601729 PCDHGA11Q9Y5H2 935 aa8.36□□□□□ -1.07
AC006539.2-201ENST00000601729 ATP1A2P50993 1020 aa8.35□□□□□ -1.07
AC006539.2-201ENST00000601729 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
AC006539.2-201ENST00000601729 CCDC97Q96F63 343 aaPredicted RBP8.35□□□□□ -1.07
AC006539.2-201ENST00000601729 ESCO1Q5FWF5 840 aa8.34□□□□□ -1.07
AC006539.2-201ENST00000601729 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
AC006539.2-201ENST00000601729 DACH1Q9UI36 760 aa8.34□□□□□ -1.07
AC006539.2-201ENST00000601729 HRH3Q9Y5N1 445 aa8.34□□□□□ -1.07
AC006539.2-201ENST00000601729 SOS2Q07890 1332 aaPredicted RBP8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 BMP1P13497 986 aa8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 SRPK2P78362 688 aaKnown RBP8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 KANK4Q5T7N3 995 aaPredicted RBP8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 LARGE2Q8N3Y3 721 aa8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 ZFP42Q96MM3 310 aa8.33□□□□□ -1.08
AC006539.2-201ENST00000601729 FAM196BA6NMK8 535 aa8.32□□□□□ -1.08
AC006539.2-201ENST00000601729 M0R2N6 131 aa8.32□□□□□ -1.08
AC006539.2-201ENST00000601729 GTF2IP78347 998 aa8.32□□□□□ -1.08
AC006539.2-201ENST00000601729 SIX5Q8N196 739 aa8.32□□□□□ -1.08
AC006539.2-201ENST00000601729 ESYT1Q9BSJ8 1104 aa8.32□□□□□ -1.08
AC006539.2-201ENST00000601729 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
AC006539.2-201ENST00000601729 A0A1W2PRU2 124 aa8.31□□□□□ -1.08
AC006539.2-201ENST00000601729 BMP2P12643 396 aa8.31□□□□□ -1.08
AC006539.2-201ENST00000601729 SCNN1DP51172 638 aa8.31□□□□□ -1.08
AC006539.2-201ENST00000601729 AGBL1Q96MI9 1066 aa8.31□□□□□ -1.08
AC006539.2-201ENST00000601729 SLC4A9Q96Q91 983 aa8.31□□□□□ -1.08
AC006539.2-201ENST00000601729 PURBQ96QR8 312 aaKnown RBP8.31□□□□□ -1.08
AC006539.2-201ENST00000601729 ARID3CA6NKF2 412 aa8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 PPP1R15AO75807 674 aaPredicted RBP8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 RELBQ01201 579 aa8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 WDR44Q5JSH3 913 aa8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 DEPDC4Q8N2C3 294 aa8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 CCDC82Q8N4S0 544 aa8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 GMPR2Q9P2T1 348 aaKnown RBP8.3□□□□□ -1.08
AC006539.2-201ENST00000601729 ZBTB7BO15156 539 aaPredicted RBP8.29□□□□□ -1.08
AC006539.2-201ENST00000601729 DKK1O94907 266 aa8.29□□□□□ -1.08
AC006539.2-201ENST00000601729 INHAP05111 366 aa8.29□□□□□ -1.08
AC006539.2-201ENST00000601729 CLDN10P78369 228 aa8.29□□□□□ -1.08
AC006539.2-201ENST00000601729 ETNK1Q9HBU6 452 aa8.29□□□□□ -1.08
AC006539.2-201ENST00000601729 DNAAF2Q9NVR5 837 aaKnown RBP8.29□□□□□ -1.08
AC006539.2-201ENST00000601729 TTLL8A6PVC2 850 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 TMEM229AB2RXF0 380 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 IL2RAP01589 272 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 OGFOD1Q8N543 542 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 CNKSR1Q969H4 720 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 PBXIP1Q96AQ6 731 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 GRIP2Q9C0E4 1043 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 ARHGEF10LQ9HCE6 1279 aa8.28□□□□□ -1.08
AC006539.2-201ENST00000601729 SPATA31C2B4DYI2 1134 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 BACH1O14867 736 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 ATG7O95352 703 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 GDF10P55107 478 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 PTK7Q13308 1070 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 MTFR1Q15390 333 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 C6orf118Q5T5N4 469 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 FOXD4L5Q5VV16 416 aaPredicted RBP8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 NLRP3Q96P20 1036 aa8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 INSM2Q96T92 566 aaPredicted RBP8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 FHDC1Q9C0D6 1143 aaPredicted RBP8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 ZNF395Q9H8N7 513 aaPredicted RBP8.27□□□□□ -1.09
AC006539.2-201ENST00000601729 CTSOP43234 321 aaPredicted RBP8.26□□□□□ -1.09
AC006539.2-201ENST00000601729 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.09
AC006539.2-201ENST00000601729 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L15C9J2P7 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L10C9JJH3 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L13C9JLJ4 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 C11orf95C9JLR9 678 aaPredicted RBP8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L12C9JPN9 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L11C9JVI0 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L21D6R901 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L18D6R9N7 530 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms