RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 MARCH10Q8NA82 808 aaPredicted RBP19.67■□□□□ 0.74
LTBP4-228ENST00000600499 EP400Q96L91 3159 aa19.67■□□□□ 0.74
LTBP4-228ENST00000600499 PKD1L3Q7Z443 1732 aa19.66■□□□□ 0.74
LTBP4-228ENST00000600499 SHANK3Q9BYB0 1731 aa19.66■□□□□ 0.74
LTBP4-228ENST00000600499 UPF1Q92900 1129 aaKnown RBP eCLIP19.66■□□□□ 0.74
LTBP4-228ENST00000600499 CCDC125Q86Z20 511 aa19.65■□□□□ 0.74
LTBP4-228ENST00000600499 ZCRB1Q8TBF4 217 aaKnown RBP19.65■□□□□ 0.74
LTBP4-228ENST00000600499 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
LTBP4-228ENST00000600499 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
LTBP4-228ENST00000600499 FAM182BQ5T319 152 aa19.61■□□□□ 0.73
LTBP4-228ENST00000600499 NUDCQ9Y266 331 aa19.61■□□□□ 0.73
LTBP4-228ENST00000600499 SBF2Q86WG5 1849 aa19.6■□□□□ 0.73
LTBP4-228ENST00000600499 PCDH11XQ9BZA7 1347 aa19.6■□□□□ 0.73
LTBP4-228ENST00000600499 PCDH11YQ9BZA8 1340 aa19.6■□□□□ 0.73
LTBP4-228ENST00000600499 CYP27B1O15528 508 aa19.59■□□□□ 0.73
LTBP4-228ENST00000600499 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
LTBP4-228ENST00000600499 AMOTQ4VCS5 1084 aa19.59■□□□□ 0.73
LTBP4-228ENST00000600499 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
LTBP4-228ENST00000600499 U2SURPO15042 1029 aaKnown RBP19.56■□□□□ 0.72
LTBP4-228ENST00000600499 FCHSD2O94868 740 aa19.56■□□□□ 0.72
LTBP4-228ENST00000600499 PLEKHO1Q53GL0 409 aaPredicted RBP19.56■□□□□ 0.72
LTBP4-228ENST00000600499 DDX54Q8TDD1 881 aaKnown RBP19.56■□□□□ 0.72
LTBP4-228ENST00000600499 HMOX1P09601 288 aa19.55■□□□□ 0.72
LTBP4-228ENST00000600499 RSPH6AQ9H0K4 717 aa19.55■□□□□ 0.72
LTBP4-228ENST00000600499 TNS1Q9HBL0 1735 aaKnown RBP19.55■□□□□ 0.72
LTBP4-228ENST00000600499 ANP32CO43423 234 aa19.54■□□□□ 0.72
LTBP4-228ENST00000600499 PHKG2P15735 406 aa19.54■□□□□ 0.72
LTBP4-228ENST00000600499 IFNL2Q8IZJ0 200 aa19.54■□□□□ 0.72
LTBP4-228ENST00000600499 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
LTBP4-228ENST00000600499 NHSQ6T4R5 1651 aa19.53■□□□□ 0.72
LTBP4-228ENST00000600499 TRIM37O94972 964 aa19.52■□□□□ 0.72
LTBP4-228ENST00000600499 U2AF1L5P0DN76 240 aaPredicted RBP19.52■□□□□ 0.72
LTBP4-228ENST00000600499 U2AF1Q01081 240 aaKnown RBP eCLIP19.52■□□□□ 0.72
LTBP4-228ENST00000600499 PLSCR1O15162 318 aa19.49■□□□□ 0.71
LTBP4-228ENST00000600499 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
LTBP4-228ENST00000600499 PRKAR2BP31323 418 aa19.49■□□□□ 0.71
LTBP4-228ENST00000600499 MTHFSDQ2M296 383 aaKnown RBP19.49■□□□□ 0.71
LTBP4-228ENST00000600499 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
LTBP4-228ENST00000600499 PLEKHF1Q96S99 279 aa19.49■□□□□ 0.71
LTBP4-228ENST00000600499 RGPD3A6NKT7 1758 aaPredicted RBP19.48■□□□□ 0.71
LTBP4-228ENST00000600499 RGPD4Q7Z3J3 1758 aa19.48■□□□□ 0.71
LTBP4-228ENST00000600499 KCNQ2O43526 872 aa19.48■□□□□ 0.71
LTBP4-228ENST00000600499 SF3B2Q13435 895 aaKnown RBP19.48■□□□□ 0.71
LTBP4-228ENST00000600499 AKAP4Q5JQC9 854 aa19.48■□□□□ 0.71
LTBP4-228ENST00000600499 PTF1AQ7RTS3 328 aa19.48■□□□□ 0.71
LTBP4-228ENST00000600499 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
LTBP4-228ENST00000600499 TOGARAM1Q9Y4F4 1720 aa19.48■□□□□ 0.71
LTBP4-228ENST00000600499 ADAMTS7Q9UKP4 1686 aa19.47■□□□□ 0.71
LTBP4-228ENST00000600499 DCAF5Q96JK2 942 aa19.47■□□□□ 0.71
LTBP4-228ENST00000600499 PHACTR3Q96KR7 559 aa19.47■□□□□ 0.71
LTBP4-228ENST00000600499 BAG6P46379 1132 aa19.46■□□□□ 0.71
LTBP4-228ENST00000600499 GAS2L2Q8NHY3 880 aa19.46■□□□□ 0.71
LTBP4-228ENST00000600499 ACSBG1Q96GR2 724 aa19.46■□□□□ 0.71
LTBP4-228ENST00000600499 PNNQ9H307 717 aaKnown RBP19.46■□□□□ 0.71
LTBP4-228ENST00000600499 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
LTBP4-228ENST00000600499 ERVV-2B6SEH9 535 aa19.45■□□□□ 0.7
LTBP4-228ENST00000600499 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
LTBP4-228ENST00000600499 C1orf141Q5JVX7 400 aa19.45■□□□□ 0.7
LTBP4-228ENST00000600499 CAMKK2Q96RR4 588 aa19.45■□□□□ 0.7
LTBP4-228ENST00000600499 BTAF1O14981 1849 aa19.44■□□□□ 0.7
LTBP4-228ENST00000600499 ITGB4P16144 1822 aa19.44■□□□□ 0.7
LTBP4-228ENST00000600499 APBA3O96018 575 aa19.44■□□□□ 0.7
LTBP4-228ENST00000600499 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
LTBP4-228ENST00000600499 KAT6BQ8WYB5 2073 aa19.44■□□□□ 0.7
LTBP4-228ENST00000600499 SCN11AQ9UI33 1791 aa19.43■□□□□ 0.7
LTBP4-228ENST00000600499 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
LTBP4-228ENST00000600499 EN1Q05925 392 aaPredicted RBP19.41■□□□□ 0.7
LTBP4-228ENST00000600499 PNISRQ8TF01 805 aaKnown RBP19.41■□□□□ 0.7
LTBP4-228ENST00000600499 ADAMTS8Q9UP79 889 aa19.41■□□□□ 0.7
LTBP4-228ENST00000600499 MRC1P22897 1456 aa19.41■□□□□ 0.7
LTBP4-228ENST00000600499 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
LTBP4-228ENST00000600499 HTATSF1O43719 755 aaKnown RBP19.4■□□□□ 0.7
LTBP4-228ENST00000600499 WDR43Q15061 677 aaKnown RBP eCLIP19.4■□□□□ 0.76e-7■■□□□ 12.2
LTBP4-228ENST00000600499 PIGBQ92521 554 aa19.4■□□□□ 0.7
LTBP4-228ENST00000600499 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
LTBP4-228ENST00000600499 RNMTO43148 476 aaKnown RBP19.39■□□□□ 0.69
LTBP4-228ENST00000600499 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
LTBP4-228ENST00000600499 CEMIPQ8WUJ3 1361 aa19.39■□□□□ 0.69
LTBP4-228ENST00000600499 RREB1Q92766 1687 aa19.39■□□□□ 0.69
LTBP4-228ENST00000600499 EZH2Q15910 746 aaKnown RBP19.38■□□□□ 0.69
LTBP4-228ENST00000600499 VIRMAQ69YN4 1812 aaKnown RBP19.38■□□□□ 0.69
LTBP4-228ENST00000600499 PROM2Q8N271 834 aa19.38■□□□□ 0.69
LTBP4-228ENST00000600499 NEFMP07197 916 aa19.37■□□□□ 0.69
LTBP4-228ENST00000600499 IL17REQ8NFR9 667 aa19.37■□□□□ 0.69
LTBP4-228ENST00000600499 SYTL4Q96C24 671 aaPredicted RBP19.37■□□□□ 0.69
LTBP4-228ENST00000600499 LGR6Q9HBX8 967 aa19.37■□□□□ 0.69
LTBP4-228ENST00000600499 MRS2Q9HD23 443 aa19.37■□□□□ 0.69
LTBP4-228ENST00000600499 TMOD3Q9NYL9 352 aa19.37■□□□□ 0.69
LTBP4-228ENST00000600499 LY75O60449 1722 aa19.37■□□□□ 0.69
LTBP4-228ENST00000600499 NFE2L2Q16236 605 aa19.36■□□□□ 0.69
LTBP4-228ENST00000600499 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
LTBP4-228ENST00000600499 RUNDC1Q96C34 613 aa19.36■□□□□ 0.69
LTBP4-228ENST00000600499 SMARCC1Q92922 1105 aaPredicted RBP19.35■□□□□ 0.69
LTBP4-228ENST00000600499 SLC52A2Q9HAB3 445 aa19.35■□□□□ 0.69
LTBP4-228ENST00000600499 MAPK8IP3Q9UPT6 1336 aa19.34■□□□□ 0.69
LTBP4-228ENST00000600499 DLG5Q8TDM6 1919 aa19.34■□□□□ 0.69
LTBP4-228ENST00000600499 CCER2I3L3R5 266 aa19.34■□□□□ 0.69
LTBP4-228ENST00000600499 CABP4P57796 275 aa19.34■□□□□ 0.69
LTBP4-228ENST00000600499 TXNRD1Q16881 649 aa19.34■□□□□ 0.69
LTBP4-228ENST00000600499 SLC27A3Q5K4L6 730 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms