RNA–Protein interactions for RNA: ENST00000599946.2

AC009041.1-202, humanhuman

TSL 5 BASIC

Gene AC009041.1, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-202ENST00000599946 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
AC009041.1-202ENST00000599946 PLSCR1O15162 318 aa17.56■□□□□ 0.4
AC009041.1-202ENST00000599946 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
AC009041.1-202ENST00000599946 CAMKK2Q96RR4 588 aa17.56■□□□□ 0.4
AC009041.1-202ENST00000599946 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
AC009041.1-202ENST00000599946 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
AC009041.1-202ENST00000599946 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
AC009041.1-202ENST00000599946 PPP2R1AP30153 589 aa17.53■□□□□ 0.4
AC009041.1-202ENST00000599946 EZH2Q15910 746 aaKnown RBP17.53■□□□□ 0.4
AC009041.1-202ENST00000599946 KDRP35968 1356 aa17.53■□□□□ 0.4
AC009041.1-202ENST00000599946 MAP2P11137 1827 aaKnown RBP17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 CYP27B1O15528 508 aa17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 KCNQ2O43526 872 aa17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
AC009041.1-202ENST00000599946 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
AC009041.1-202ENST00000599946 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
AC009041.1-202ENST00000599946 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
AC009041.1-202ENST00000599946 RALBP1Q15311 655 aa17.5■□□□□ 0.39
AC009041.1-202ENST00000599946 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
AC009041.1-202ENST00000599946 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
AC009041.1-202ENST00000599946 RGPD1P0DJD0 1748 aa17.49■□□□□ 0.39
AC009041.1-202ENST00000599946 PRIM1P49642 420 aaKnown RBP17.48■□□□□ 0.39
AC009041.1-202ENST00000599946 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
AC009041.1-202ENST00000599946 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
AC009041.1-202ENST00000599946 PHKG2P15735 406 aa17.47■□□□□ 0.39
AC009041.1-202ENST00000599946 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
AC009041.1-202ENST00000599946 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
AC009041.1-202ENST00000599946 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
AC009041.1-202ENST00000599946 PROM2Q8N271 834 aa17.45■□□□□ 0.38
AC009041.1-202ENST00000599946 RGPD2P0DJD1 1756 aa17.44■□□□□ 0.38
AC009041.1-202ENST00000599946 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
AC009041.1-202ENST00000599946 HMOX1P09601 288 aa17.44■□□□□ 0.38
AC009041.1-202ENST00000599946 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
AC009041.1-202ENST00000599946 NBPF14Q5TI25 921 aa17.44■□□□□ 0.38
AC009041.1-202ENST00000599946 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
AC009041.1-202ENST00000599946 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
AC009041.1-202ENST00000599946 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
AC009041.1-202ENST00000599946 C1orf141Q5JVX7 400 aa17.42■□□□□ 0.38
AC009041.1-202ENST00000599946 SLC27A3Q5K4L6 730 aa17.41■□□□□ 0.38
AC009041.1-202ENST00000599946 ERVV-2B6SEH9 535 aa17.4■□□□□ 0.38
AC009041.1-202ENST00000599946 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
AC009041.1-202ENST00000599946 AKAP4Q5JQC9 854 aa17.4■□□□□ 0.38
AC009041.1-202ENST00000599946 NHSQ6T4R5 1651 aa17.39■□□□□ 0.37
AC009041.1-202ENST00000599946 FCHSD2O94868 740 aa17.39■□□□□ 0.37
AC009041.1-202ENST00000599946 U2AF1L5P0DN76 240 aaPredicted RBP17.39■□□□□ 0.37
AC009041.1-202ENST00000599946 U2AF1Q01081 240 aaKnown RBP eCLIP17.39■□□□□ 0.37
AC009041.1-202ENST00000599946 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
AC009041.1-202ENST00000599946 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
AC009041.1-202ENST00000599946 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
AC009041.1-202ENST00000599946 PKD1L3Q7Z443 1732 aa17.38■□□□□ 0.37
AC009041.1-202ENST00000599946 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
AC009041.1-202ENST00000599946 PIGBQ92521 554 aa17.38■□□□□ 0.37
AC009041.1-202ENST00000599946 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
AC009041.1-202ENST00000599946 TMOD3Q9NYL9 352 aa17.38■□□□□ 0.37
AC009041.1-202ENST00000599946 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
AC009041.1-202ENST00000599946 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
AC009041.1-202ENST00000599946 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
AC009041.1-202ENST00000599946 SBF2Q86WG5 1849 aa17.36■□□□□ 0.37
AC009041.1-202ENST00000599946 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
AC009041.1-202ENST00000599946 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
AC009041.1-202ENST00000599946 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
AC009041.1-202ENST00000599946 STK32BQ9NY57 414 aa17.35■□□□□ 0.37
AC009041.1-202ENST00000599946 RGPD3A6NKT7 1758 aaPredicted RBP17.35■□□□□ 0.37
AC009041.1-202ENST00000599946 RGPD4Q7Z3J3 1758 aa17.35■□□□□ 0.37
AC009041.1-202ENST00000599946 PSDA5PKW4 1024 aaPredicted RBP17.34■□□□□ 0.37
AC009041.1-202ENST00000599946 CABP4P57796 275 aa17.34■□□□□ 0.37
AC009041.1-202ENST00000599946 PALLDQ8WX93 1383 aa17.34■□□□□ 0.37
AC009041.1-202ENST00000599946 ANO8Q9HCE9 1232 aaPredicted RBP17.34■□□□□ 0.37
AC009041.1-202ENST00000599946 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.37
AC009041.1-202ENST00000599946 KDM6AO15550 1401 aaPredicted RBP17.33■□□□□ 0.36
AC009041.1-202ENST00000599946 SLC15A2Q16348 729 aa17.33■□□□□ 0.36
AC009041.1-202ENST00000599946 PNNQ9H307 717 aaKnown RBP17.33■□□□□ 0.36
AC009041.1-202ENST00000599946 CCNL1Q9UK58 526 aaPredicted RBP17.33■□□□□ 0.36
AC009041.1-202ENST00000599946 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
AC009041.1-202ENST00000599946 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
AC009041.1-202ENST00000599946 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
AC009041.1-202ENST00000599946 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
AC009041.1-202ENST00000599946 RREB1Q92766 1687 aa17.31■□□□□ 0.36
AC009041.1-202ENST00000599946 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
AC009041.1-202ENST00000599946 NEFMP07197 916 aa17.3■□□□□ 0.36
AC009041.1-202ENST00000599946 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
AC009041.1-202ENST00000599946 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
AC009041.1-202ENST00000599946 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
AC009041.1-202ENST00000599946 SIK1P57059 783 aa17.29■□□□□ 0.36
AC009041.1-202ENST00000599946 NFATC2IPQ8NCF5 419 aa17.29■□□□□ 0.36
AC009041.1-202ENST00000599946 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
AC009041.1-202ENST00000599946 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
AC009041.1-202ENST00000599946 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
AC009041.1-202ENST00000599946 BTAF1O14981 1849 aa17.28■□□□□ 0.36
AC009041.1-202ENST00000599946 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
AC009041.1-202ENST00000599946 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.36
AC009041.1-202ENST00000599946 NUP188Q5SRE5 1749 aa17.27■□□□□ 0.35
AC009041.1-202ENST00000599946 KCNQ4P56696 695 aa17.26■□□□□ 0.35
AC009041.1-202ENST00000599946 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
AC009041.1-202ENST00000599946 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
AC009041.1-202ENST00000599946 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms