RNA–Protein interactions for RNA: ENST00000599946.2

AC009041.1-202, humanhuman

TSL 5 BASIC

Gene AC009041.1, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-202ENST00000599946 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
AC009041.1-202ENST00000599946 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
AC009041.1-202ENST00000599946 ABCC9O60706 1549 aa27.33■■□□□ 1.97
AC009041.1-202ENST00000599946 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
AC009041.1-202ENST00000599946 NACADO15069 1562 aa26.3■■□□□ 1.8
AC009041.1-202ENST00000599946 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
AC009041.1-202ENST00000599946 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
AC009041.1-202ENST00000599946 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
AC009041.1-202ENST00000599946 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
AC009041.1-202ENST00000599946 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
AC009041.1-202ENST00000599946 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
AC009041.1-202ENST00000599946 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
AC009041.1-202ENST00000599946 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
AC009041.1-202ENST00000599946 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
AC009041.1-202ENST00000599946 DNAJC5BQ9UF47 199 aa25.25■■□□□ 1.63
AC009041.1-202ENST00000599946 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
AC009041.1-202ENST00000599946 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
AC009041.1-202ENST00000599946 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
AC009041.1-202ENST00000599946 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
AC009041.1-202ENST00000599946 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
AC009041.1-202ENST00000599946 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
AC009041.1-202ENST00000599946 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
AC009041.1-202ENST00000599946 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
AC009041.1-202ENST00000599946 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
AC009041.1-202ENST00000599946 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
AC009041.1-202ENST00000599946 HMGXB3Q12766 1538 aa24.14■■□□□ 1.45
AC009041.1-202ENST00000599946 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
AC009041.1-202ENST00000599946 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
AC009041.1-202ENST00000599946 WIZO95785 1651 aa23.86■■□□□ 1.41
AC009041.1-202ENST00000599946 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
AC009041.1-202ENST00000599946 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
AC009041.1-202ENST00000599946 NESP48681 1621 aa23.62■■□□□ 1.37
AC009041.1-202ENST00000599946 LAMC3Q9Y6N6 1575 aa23.6■■□□□ 1.37
AC009041.1-202ENST00000599946 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
AC009041.1-202ENST00000599946 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
AC009041.1-202ENST00000599946 CFTRP13569 1480 aa23.47■■□□□ 1.35
AC009041.1-202ENST00000599946 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
AC009041.1-202ENST00000599946 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
AC009041.1-202ENST00000599946 CUX2O14529 1486 aa23.38■■□□□ 1.33
AC009041.1-202ENST00000599946 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
AC009041.1-202ENST00000599946 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
AC009041.1-202ENST00000599946 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
AC009041.1-202ENST00000599946 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
AC009041.1-202ENST00000599946 THOC2Q8NI27 1593 aaKnown RBP23.22■■□□□ 1.31
AC009041.1-202ENST00000599946 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
AC009041.1-202ENST00000599946 WDR62O43379 1518 aa23.13■■□□□ 1.29
AC009041.1-202ENST00000599946 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
AC009041.1-202ENST00000599946 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
AC009041.1-202ENST00000599946 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
AC009041.1-202ENST00000599946 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
AC009041.1-202ENST00000599946 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
AC009041.1-202ENST00000599946 IFT140Q96RY7 1462 aa22.81■■□□□ 1.24
AC009041.1-202ENST00000599946 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
AC009041.1-202ENST00000599946 CUX1P39880 1505 aa22.72■■□□□ 1.23
AC009041.1-202ENST00000599946 SOGA1O94964 1423 aa22.67■■□□□ 1.22
AC009041.1-202ENST00000599946 ZNF608Q9ULD9 1512 aaPredicted RBP22.65■■□□□ 1.22
AC009041.1-202ENST00000599946 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
AC009041.1-202ENST00000599946 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.21
AC009041.1-202ENST00000599946 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
AC009041.1-202ENST00000599946 TARBP1Q13395 1621 aaKnown RBP22.58■■□□□ 1.21
AC009041.1-202ENST00000599946 AQRO60306 1485 aaKnown RBP eCLIP22.55■■□□□ 1.2
AC009041.1-202ENST00000599946 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
AC009041.1-202ENST00000599946 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
AC009041.1-202ENST00000599946 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
AC009041.1-202ENST00000599946 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
AC009041.1-202ENST00000599946 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
AC009041.1-202ENST00000599946 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
AC009041.1-202ENST00000599946 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
AC009041.1-202ENST00000599946 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
AC009041.1-202ENST00000599946 GRIN2BQ13224 1484 aa22.4■■□□□ 1.18
AC009041.1-202ENST00000599946 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
AC009041.1-202ENST00000599946 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
AC009041.1-202ENST00000599946 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
AC009041.1-202ENST00000599946 FBLN2P98095 1184 aa22.3■■□□□ 1.16
AC009041.1-202ENST00000599946 CHMP7Q8WUX9 453 aaPredicted RBP22.29■■□□□ 1.16
AC009041.1-202ENST00000599946 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
AC009041.1-202ENST00000599946 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
AC009041.1-202ENST00000599946 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
AC009041.1-202ENST00000599946 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
AC009041.1-202ENST00000599946 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
AC009041.1-202ENST00000599946 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
AC009041.1-202ENST00000599946 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
AC009041.1-202ENST00000599946 IGF1RP08069 1367 aa22.12■■□□□ 1.13
AC009041.1-202ENST00000599946 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
AC009041.1-202ENST00000599946 CHD1O14646 1710 aa22.09■■□□□ 1.13
AC009041.1-202ENST00000599946 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
AC009041.1-202ENST00000599946 NUP160Q12769 1436 aa22.03■■□□□ 1.12
AC009041.1-202ENST00000599946 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
AC009041.1-202ENST00000599946 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
AC009041.1-202ENST00000599946 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
AC009041.1-202ENST00000599946 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
AC009041.1-202ENST00000599946 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
AC009041.1-202ENST00000599946 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
AC009041.1-202ENST00000599946 CUL7Q14999 1698 aa21.9■■□□□ 1.1
AC009041.1-202ENST00000599946 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
AC009041.1-202ENST00000599946 RUSC2Q8N2Y8 1516 aa21.89■■□□□ 1.09
AC009041.1-202ENST00000599946 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
AC009041.1-202ENST00000599946 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
AC009041.1-202ENST00000599946 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
AC009041.1-202ENST00000599946 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms