RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 RGPD2P0DJD1 1756 aa21.18■□□□□ 0.98
XRCC1-209ENST00000599693 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
XRCC1-209ENST00000599693 TFCP2L1Q9NZI6 479 aa21.18■□□□□ 0.98
XRCC1-209ENST00000599693 PRIM1P49642 420 aaKnown RBP21.17■□□□□ 0.98
XRCC1-209ENST00000599693 MAP3K19Q56UN5 1328 aa21.16■□□□□ 0.98
XRCC1-209ENST00000599693 KCNQ4P56696 695 aa21.16■□□□□ 0.98
XRCC1-209ENST00000599693 MEGF6O75095 1541 aa21.15■□□□□ 0.98
XRCC1-209ENST00000599693 HOXC9P31274 260 aa21.15■□□□□ 0.98
XRCC1-209ENST00000599693 COG3Q96JB2 828 aa21.15■□□□□ 0.98
XRCC1-209ENST00000599693 PELP1Q8IZL8 1130 aaKnown RBP21.14■□□□□ 0.97
XRCC1-209ENST00000599693 ZCRB1Q8TBF4 217 aaKnown RBP21.14■□□□□ 0.97
XRCC1-209ENST00000599693 AMPHP49418 695 aa21.13■□□□□ 0.97
XRCC1-209ENST00000599693 NLGN2Q8NFZ4 835 aa21.13■□□□□ 0.97
XRCC1-209ENST00000599693 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
XRCC1-209ENST00000599693 GIGYF1O75420 1035 aaPredicted RBP21.12■□□□□ 0.97
XRCC1-209ENST00000599693 CCNL1Q9UK58 526 aaPredicted RBP21.11■□□□□ 0.97
XRCC1-209ENST00000599693 TONSLQ96HA7 1378 aa21.1■□□□□ 0.97
XRCC1-209ENST00000599693 FBLN1P23142 703 aa21.09■□□□□ 0.97
XRCC1-209ENST00000599693 TESK2Q96S53 571 aa21.09■□□□□ 0.97
XRCC1-209ENST00000599693 USP47Q96K76 1375 aa21.09■□□□□ 0.97
XRCC1-209ENST00000599693 C5P01031 1676 aa21.09■□□□□ 0.97
XRCC1-209ENST00000599693 CGNL1Q0VF96 1302 aa21.07■□□□□ 0.96
XRCC1-209ENST00000599693 MSH5O43196 834 aa21.07■□□□□ 0.96
XRCC1-209ENST00000599693 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
XRCC1-209ENST00000599693 CEP350Q5VT06 3117 aa21.07■□□□□ 0.96
XRCC1-209ENST00000599693 GRIN3BO60391 1043 aa21.06■□□□□ 0.96
XRCC1-209ENST00000599693 YBX3P16989 372 aaKnown RBP eCLIP21.06■□□□□ 0.96
XRCC1-209ENST00000599693 SMG6Q86US8 1419 aaKnown RBP21.05■□□□□ 0.96
XRCC1-209ENST00000599693 NBPF6Q5VWK0 638 aa21.05■□□□□ 0.96
XRCC1-209ENST00000599693 NBPF4Q96M43 638 aa21.05■□□□□ 0.96
XRCC1-209ENST00000599693 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
XRCC1-209ENST00000599693 RRS1Q15050 365 aaKnown RBP21.04■□□□□ 0.96
XRCC1-209ENST00000599693 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
XRCC1-209ENST00000599693 SLC24A1O60721 1099 aa21.03■□□□□ 0.96
XRCC1-209ENST00000599693 MSL1Q68DK7 614 aa21.03■□□□□ 0.96
XRCC1-209ENST00000599693 USHBP1Q8N6Y0 703 aa21.03■□□□□ 0.96
XRCC1-209ENST00000599693 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
XRCC1-209ENST00000599693 PCDH11XQ9BZA7 1347 aa21.01■□□□□ 0.95
XRCC1-209ENST00000599693 PCDH11YQ9BZA8 1340 aa21.01■□□□□ 0.95
XRCC1-209ENST00000599693 KIF20BQ96Q89 1820 aa21■□□□□ 0.95
XRCC1-209ENST00000599693 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
XRCC1-209ENST00000599693 INSRP06213 1382 aa20.99■□□□□ 0.95
XRCC1-209ENST00000599693 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
XRCC1-209ENST00000599693 TOGARAM1Q9Y4F4 1720 aa20.99■□□□□ 0.95
XRCC1-209ENST00000599693 FYB1O15117 783 aa20.99■□□□□ 0.95
XRCC1-209ENST00000599693 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
XRCC1-209ENST00000599693 FLAD1Q8NFF5 587 aa20.99■□□□□ 0.95
XRCC1-209ENST00000599693 GGNBP2Q9H3C7 697 aa20.99■□□□□ 0.95
XRCC1-209ENST00000599693 C4BP0C0L5 1744 aa20.98■□□□□ 0.95
XRCC1-209ENST00000599693 ATP10DQ9P241 1426 aa20.98■□□□□ 0.95
XRCC1-209ENST00000599693 CD2APQ9Y5K6 639 aa20.98■□□□□ 0.95
XRCC1-209ENST00000599693 ITGB4P16144 1822 aa20.97■□□□□ 0.95
XRCC1-209ENST00000599693 PKD1L3Q7Z443 1732 aa20.97■□□□□ 0.95
XRCC1-209ENST00000599693 FLT4P35916 1363 aa20.97■□□□□ 0.95
XRCC1-209ENST00000599693 KIF24Q5T7B8 1368 aa20.97■□□□□ 0.95
XRCC1-209ENST00000599693 HSP90AB2PQ58FF8 381 aa20.96■□□□□ 0.95
XRCC1-209ENST00000599693 UBR3Q6ZT12 1888 aa20.94■□□□□ 0.94
XRCC1-209ENST00000599693 MPRIPQ6WCQ1 1025 aa20.94■□□□□ 0.94
XRCC1-209ENST00000599693 CYP27B1O15528 508 aa20.93■□□□□ 0.94
XRCC1-209ENST00000599693 TMF1P82094 1093 aa20.93■□□□□ 0.94
XRCC1-209ENST00000599693 ADCY9O60503 1353 aa20.93■□□□□ 0.94
XRCC1-209ENST00000599693 NSD3Q9BZ95 1437 aa20.93■□□□□ 0.94
XRCC1-209ENST00000599693 SMARCC1Q92922 1105 aaPredicted RBP20.92■□□□□ 0.94
XRCC1-209ENST00000599693 AK7Q96M32 723 aa20.92■□□□□ 0.94
XRCC1-209ENST00000599693 NCAPD2Q15021 1401 aa20.91■□□□□ 0.94
XRCC1-209ENST00000599693 MAP2P11137 1827 aaKnown RBP20.9■□□□□ 0.94
XRCC1-209ENST00000599693 AMIGO3Q86WK7 504 aa20.9■□□□□ 0.94
XRCC1-209ENST00000599693 GPBP1L1Q9HC44 474 aaPredicted RBP20.9■□□□□ 0.94
XRCC1-209ENST00000599693 ANKRD26Q9UPS8 1709 aa20.9■□□□□ 0.94
XRCC1-209ENST00000599693 IFFO2Q5TF58 517 aa20.89■□□□□ 0.93
XRCC1-209ENST00000599693 IGSF1Q8N6C5 1336 aa20.87■□□□□ 0.93
XRCC1-209ENST00000599693 PHF14O94880 888 aa20.87■□□□□ 0.93
XRCC1-209ENST00000599693 PIGBQ92521 554 aa20.87■□□□□ 0.93
XRCC1-209ENST00000599693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.86■□□□□ 0.93
XRCC1-209ENST00000599693 SSFA2P28290 1259 aa20.86■□□□□ 0.93
XRCC1-209ENST00000599693 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
XRCC1-209ENST00000599693 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
XRCC1-209ENST00000599693 EMILIN1Q9Y6C2 1016 aa20.86■□□□□ 0.93
XRCC1-209ENST00000599693 SMIM5Q71RC9 77 aa20.85■□□□□ 0.93
XRCC1-209ENST00000599693 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
XRCC1-209ENST00000599693 SIK1P57059 783 aa20.84■□□□□ 0.93
XRCC1-209ENST00000599693 ZNF526Q8TF50 670 aaPredicted RBP20.84■□□□□ 0.93
XRCC1-209ENST00000599693 SPG7Q9UQ90 795 aa20.84■□□□□ 0.93
XRCC1-209ENST00000599693 CICQ96RK0 1608 aaPredicted RBP20.83■□□□□ 0.93
XRCC1-209ENST00000599693 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
XRCC1-209ENST00000599693 HSPA6P17066 643 aa20.82■□□□□ 0.92
XRCC1-209ENST00000599693 CARD14Q9BXL6 1004 aa20.82■□□□□ 0.92
XRCC1-209ENST00000599693 WWC3Q9ULE0 1092 aa20.82■□□□□ 0.92
XRCC1-209ENST00000599693 TMOD3Q9NYL9 352 aa20.81■□□□□ 0.92
XRCC1-209ENST00000599693 PPM1GO15355 546 aaPredicted RBP20.8■□□□□ 0.92
XRCC1-209ENST00000599693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
XRCC1-209ENST00000599693 KIF13BQ9NQT8 1826 aa20.79■□□□□ 0.92
XRCC1-209ENST00000599693 GNPATO15228 680 aa20.79■□□□□ 0.92
XRCC1-209ENST00000599693 ITPK1Q13572 414 aa20.79■□□□□ 0.92
XRCC1-209ENST00000599693 ASAP1Q9ULH1 1129 aa20.79■□□□□ 0.92
XRCC1-209ENST00000599693 WASHC2AQ641Q2 1341 aa20.78■□□□□ 0.92
XRCC1-209ENST00000599693 EYA1Q99502 592 aa20.78■□□□□ 0.92
XRCC1-209ENST00000599693 KIAA1551Q9HCM1 1747 aa20.78■□□□□ 0.92
XRCC1-209ENST00000599693 PHKG2P15735 406 aa20.77■□□□□ 0.92
XRCC1-209ENST00000599693 PXDNLA1KZ92 1463 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms