RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 SPATA31A5Q5VU36 1347 aa28.91■■■□□ 2.22
LTBP4-224ENST00000599016 SPATA31A7Q8IWB4 1347 aa28.91■■■□□ 2.22
LTBP4-224ENST00000599016 PARP4Q9UKK3 1724 aaKnown RBP28.9■■■□□ 2.22
LTBP4-224ENST00000599016 THRAP3Q9Y2W1 955 aaKnown RBP28.9■■■□□ 2.22
LTBP4-224ENST00000599016 SPATA31A1Q5TZJ5 1347 aa28.9■■■□□ 2.22
LTBP4-224ENST00000599016 TCP11L2Q8N4U5 519 aa28.89■■■□□ 2.22
LTBP4-224ENST00000599016 WNK3Q9BYP7 1800 aa28.88■■■□□ 2.21
LTBP4-224ENST00000599016 PLEKHG2Q9H7P9 1386 aa28.88■■■□□ 2.21
LTBP4-224ENST00000599016 IL2RBP14784 551 aa28.87■■■□□ 2.21
LTBP4-224ENST00000599016 PLEKHO1Q53GL0 409 aaPredicted RBP28.85■■■□□ 2.21
LTBP4-224ENST00000599016 PHACTR3Q96KR7 559 aa28.85■■■□□ 2.21
LTBP4-224ENST00000599016 APAF1O14727 1248 aa28.84■■■□□ 2.21
LTBP4-224ENST00000599016 AMOTQ4VCS5 1084 aa28.84■■■□□ 2.21
LTBP4-224ENST00000599016 CDCA7Q9BWT1 371 aaPredicted RBP28.84■■■□□ 2.21
LTBP4-224ENST00000599016 MEGF6O75095 1541 aa28.84■■■□□ 2.21
LTBP4-224ENST00000599016 GLI3P10071 1580 aa28.83■■■□□ 2.21
LTBP4-224ENST00000599016 HNRNPUQ00839 825 aaKnown RBP eCLIP28.82■■■□□ 2.2
LTBP4-224ENST00000599016 BARGINQ6ZT62 677 aa28.82■■■□□ 2.2
LTBP4-224ENST00000599016 GAS2L2Q8NHY3 880 aa28.82■■■□□ 2.2
LTBP4-224ENST00000599016 OVOS2A0A0G2JMS6 1433 aa28.82■■■□□ 2.2
LTBP4-224ENST00000599016 NFE2L2Q16236 605 aa28.81■■■□□ 2.2
LTBP4-224ENST00000599016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.81■■■□□ 2.2
LTBP4-224ENST00000599016 SPG7Q9UQ90 795 aa28.81■■■□□ 2.2
LTBP4-224ENST00000599016 PKD1L3Q7Z443 1732 aa28.8■■■□□ 2.2
LTBP4-224ENST00000599016 DISP2A7MBM2 1401 aa28.8■■■□□ 2.2
LTBP4-224ENST00000599016 NGEFQ8N5V2 710 aa28.8■■■□□ 2.2
LTBP4-224ENST00000599016 YTHDC1Q96MU7 727 aaKnown RBP28.8■■■□□ 2.2
LTBP4-224ENST00000599016 DLG5Q8TDM6 1919 aa28.79■■■□□ 2.2
LTBP4-224ENST00000599016 TMPOP42166 694 aaKnown RBP28.79■■■□□ 2.2
LTBP4-224ENST00000599016 MTHFSDQ2M296 383 aaKnown RBP28.78■■■□□ 2.2
LTBP4-224ENST00000599016 NEUROD2Q15784 382 aa28.77■■■□□ 2.2
LTBP4-224ENST00000599016 SEPT12Q8IYM1 358 aa28.77■■■□□ 2.2
LTBP4-224ENST00000599016 RRP7AQ9Y3A4 280 aaKnown RBP28.77■■■□□ 2.2
LTBP4-224ENST00000599016 RIPK4P57078 832 aa28.76■■■□□ 2.19
LTBP4-224ENST00000599016 NCBP3Q53F19 620 aaKnown RBP28.76■■■□□ 2.19
LTBP4-224ENST00000599016 ZNF530Q6P9A1 599 aaPredicted RBP28.76■■■□□ 2.19
LTBP4-224ENST00000599016 ZCRB1Q8TBF4 217 aaKnown RBP28.76■■■□□ 2.19
LTBP4-224ENST00000599016 SENP3-EIF4A1A0A087X0R7 540 aa28.75■■■□□ 2.19
LTBP4-224ENST00000599016 FAM98CQ17RN3 349 aaKnown RBP28.75■■■□□ 2.19
LTBP4-224ENST00000599016 PSDA5PKW4 1024 aaPredicted RBP28.74■■■□□ 2.19
LTBP4-224ENST00000599016 EXOC5O00471 708 aa28.73■■■□□ 2.19
LTBP4-224ENST00000599016 LMOD3Q0VAK6 560 aa28.73■■■□□ 2.19
LTBP4-224ENST00000599016 C1orf141Q5JVX7 400 aa28.73■■■□□ 2.19
LTBP4-224ENST00000599016 SALL2Q9Y467 1007 aaPredicted RBP28.73■■■□□ 2.19
LTBP4-224ENST00000599016 PCDH11XQ9BZA7 1347 aa28.71■■■□□ 2.19
LTBP4-224ENST00000599016 PCDH11YQ9BZA8 1340 aa28.71■■■□□ 2.19
LTBP4-224ENST00000599016 A0A0G2JS52 829 aa28.71■■■□□ 2.19
LTBP4-224ENST00000599016 MYT1Q01538 1121 aa28.71■■■□□ 2.19
LTBP4-224ENST00000599016 AKAP4Q5JQC9 854 aa28.71■■■□□ 2.19
LTBP4-224ENST00000599016 SHANK3Q9BYB0 1731 aa28.7■■■□□ 2.19
LTBP4-224ENST00000599016 GNAT3A8MTJ3 354 aa28.7■■■□□ 2.18
LTBP4-224ENST00000599016 DDB1Q16531 1140 aa28.7■■■□□ 2.18
LTBP4-224ENST00000599016 IFNL2Q8IZJ0 200 aa28.7■■■□□ 2.18
LTBP4-224ENST00000599016 MAP3K5Q99683 1374 aa28.7■■■□□ 2.18
LTBP4-224ENST00000599016 TNS2Q63HR2 1409 aa28.69■■■□□ 2.18
LTBP4-224ENST00000599016 LRRC37A3O60309 1634 aa28.69■■■□□ 2.18
LTBP4-224ENST00000599016 CCDC27Q2M243 656 aa28.69■■■□□ 2.18
LTBP4-224ENST00000599016 RTF1Q92541 710 aaKnown RBP28.69■■■□□ 2.18
LTBP4-224ENST00000599016 THSD7AQ9UPZ6 1657 aa28.69■■■□□ 2.18
LTBP4-224ENST00000599016 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
LTBP4-224ENST00000599016 BRWD3Q6RI45 1802 aa28.68■■■□□ 2.18
LTBP4-224ENST00000599016 SF3B2Q13435 895 aaKnown RBP28.67■■■□□ 2.18
LTBP4-224ENST00000599016 ZBED9Q6R2W3 1325 aa28.67■■■□□ 2.18
LTBP4-224ENST00000599016 VIRMAQ69YN4 1812 aaKnown RBP28.66■■■□□ 2.18
LTBP4-224ENST00000599016 ONECUT3O60422 494 aaPredicted RBP28.66■■■□□ 2.18
LTBP4-224ENST00000599016 HSP90AB1P08238 724 aaKnown RBP28.66■■■□□ 2.18
LTBP4-224ENST00000599016 PHKG2P15735 406 aa28.66■■■□□ 2.18
LTBP4-224ENST00000599016 DDX54Q8TDD1 881 aaKnown RBP28.66■■■□□ 2.18
LTBP4-224ENST00000599016 TRIM35Q9UPQ4 493 aa28.65■■■□□ 2.18
LTBP4-224ENST00000599016 CYP27B1O15528 508 aa28.64■■■□□ 2.18
LTBP4-224ENST00000599016 KRT27Q7Z3Y8 459 aa28.64■■■□□ 2.18
LTBP4-224ENST00000599016 WWC1Q8IX03 1113 aa28.63■■■□□ 2.17
LTBP4-224ENST00000599016 SCN11AQ9UI33 1791 aa28.61■■■□□ 2.17
LTBP4-224ENST00000599016 CALD1Q05682 793 aaKnown RBP28.61■■■□□ 2.17
LTBP4-224ENST00000599016 PDE3BQ13370 1112 aa28.61■■■□□ 2.17
LTBP4-224ENST00000599016 LRP5O75197 1615 aa28.61■■■□□ 2.17
LTBP4-224ENST00000599016 MPRIPQ6WCQ1 1025 aa28.59■■■□□ 2.17
LTBP4-224ENST00000599016 MCM10Q7L590 875 aa28.59■■■□□ 2.17
LTBP4-224ENST00000599016 WDR63Q8IWG1 891 aa28.59■■■□□ 2.17
LTBP4-224ENST00000599016 DCAF5Q96JK2 942 aa28.59■■■□□ 2.17
LTBP4-224ENST00000599016 RNMTO43148 476 aaKnown RBP28.58■■■□□ 2.17
LTBP4-224ENST00000599016 DCTN1Q14203 1278 aa28.58■■■□□ 2.17
LTBP4-224ENST00000599016 ZNF521Q96K83 1311 aa28.58■■■□□ 2.17
LTBP4-224ENST00000599016 ADAMTS7Q9UKP4 1686 aa28.58■■■□□ 2.16
LTBP4-224ENST00000599016 NKX1-1Q15270 411 aaPredicted RBP28.57■■■□□ 2.16
LTBP4-224ENST00000599016 FAM182BQ5T319 152 aa28.57■■■□□ 2.16
LTBP4-224ENST00000599016 IL17REQ8NFR9 667 aa28.56■■■□□ 2.16
LTBP4-224ENST00000599016 EN1Q05925 392 aaPredicted RBP28.55■■■□□ 2.16
LTBP4-224ENST00000599016 GOLGA2Q08379 1002 aa28.55■■■□□ 2.16
LTBP4-224ENST00000599016 LGR6Q9HBX8 967 aa28.55■■■□□ 2.16
LTBP4-224ENST00000599016 IL16Q14005 1332 aa28.54■■■□□ 2.16
LTBP4-224ENST00000599016 MARCH10Q8NA82 808 aaPredicted RBP28.54■■■□□ 2.16
LTBP4-224ENST00000599016 THUMPD2Q9BTF0 503 aaKnown RBP28.54■■■□□ 2.16
LTBP4-224ENST00000599016 KAT6BQ8WYB5 2073 aa28.54■■■□□ 2.16
LTBP4-224ENST00000599016 KDM6AO15550 1401 aaPredicted RBP28.53■■■□□ 2.16
LTBP4-224ENST00000599016 CEMIPQ8WUJ3 1361 aa28.53■■■□□ 2.16
LTBP4-224ENST00000599016 TEFQ10587 303 aa28.53■■■□□ 2.16
LTBP4-224ENST00000599016 BAG6P46379 1132 aa28.52■■■□□ 2.16
LTBP4-224ENST00000599016 R3HDM1Q15032 1099 aaKnown RBP28.51■■■□□ 2.15
LTBP4-224ENST00000599016 ERVV-2B6SEH9 535 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms