RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	NOL8	Q76FK4	1167 aa	Known RBP	12.45	□□□□□ -0.42
FARP1-222	ENST00000597777	COL18A1	P39060	1754 aa		12.45	□□□□□ -0.42
FARP1-222	ENST00000597777	HSP90AB2P	Q58FF8	381 aa		12.45	□□□□□ -0.42
FARP1-222	ENST00000597777	TCP11L2	Q8N4U5	519 aa		12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	IGSF1	Q8N6C5	1336 aa		12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	NCAPD2	Q15021	1401 aa		12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	DDX17	Q92841	729 aa	Known RBP	12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	RNF123	Q5XPI4	1314 aa		12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	LMO7	Q8WWI1	1683 aa		12.44	□□□□□ -0.42
FARP1-222	ENST00000597777	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.43	□□□□□ -0.42
FARP1-222	ENST00000597777	SLC4A10	Q6U841	1118 aa		12.43	□□□□□ -0.42
FARP1-222	ENST00000597777	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.43	□□□□□ -0.42
FARP1-222	ENST00000597777	WDR63	Q8IWG1	891 aa		12.42	□□□□□ -0.42
FARP1-222	ENST00000597777	PHLPP1	O60346	1717 aa		12.42	□□□□□ -0.42
FARP1-222	ENST00000597777	PLEKHG2	Q9H7P9	1386 aa		12.42	□□□□□ -0.42
FARP1-222	ENST00000597777	COL16A1	Q07092	1604 aa	Predicted RBP	12.42	□□□□□ -0.42
FARP1-222	ENST00000597777	THUMPD2	Q9BTF0	503 aa	Known RBP	12.42	□□□□□ -0.42
FARP1-222	ENST00000597777	PRKAR2B	P31323	418 aa		12.41	□□□□□ -0.42
FARP1-222	ENST00000597777	TOM1	O60784	492 aa		12.41	□□□□□ -0.42
FARP1-222	ENST00000597777	WWC1	Q8IX03	1113 aa		12.41	□□□□□ -0.42
FARP1-222	ENST00000597777	C1orf115	Q9H7X2	142 aa		12.41	□□□□□ -0.42
FARP1-222	ENST00000597777	TMPO	P42166	694 aa	Known RBP	12.41	□□□□□ -0.42
FARP1-222	ENST00000597777	RGPD5	Q99666	1765 aa		12.4	□□□□□ -0.42
FARP1-222	ENST00000597777	TRMT2A	Q8IZ69	625 aa	Known RBP	12.4	□□□□□ -0.42
FARP1-222	ENST00000597777	MYH16	Q9H6N6	1097 aa		12.4	□□□□□ -0.42
FARP1-222	ENST00000597777	DLG5	Q8TDM6	1919 aa		12.4	□□□□□ -0.42
FARP1-222	ENST00000597777		E9PSI1	815 aa		12.4	□□□□□ -0.42
FARP1-222	ENST00000597777	NFE2L2	Q16236	605 aa		12.4	□□□□□ -0.42
FARP1-222	ENST00000597777	IL16	Q14005	1332 aa		12.39	□□□□□ -0.43
FARP1-222	ENST00000597777	LRRC59	Q96AG4	307 aa	Known RBP	12.39	□□□□□ -0.43
FARP1-222	ENST00000597777	EYA1	Q99502	592 aa		12.39	□□□□□ -0.43
FARP1-222	ENST00000597777	SLFN5	Q08AF3	891 aa		12.39	□□□□□ -0.43
FARP1-222	ENST00000597777	SULT6B1	Q6IMI4	303 aa		12.39	□□□□□ -0.43
FARP1-222	ENST00000597777	LMOD3	Q0VAK6	560 aa		12.38	□□□□□ -0.43
FARP1-222	ENST00000597777	RGPD2	P0DJD1	1756 aa		12.38	□□□□□ -0.43
FARP1-222	ENST00000597777	DDRGK1	Q96HY6	314 aa		12.37	□□□□□ -0.43
FARP1-222	ENST00000597777	TNN	Q9UQP3	1299 aa		12.37	□□□□□ -0.43
FARP1-222	ENST00000597777	ARID3A	Q99856	593 aa		12.37	□□□□□ -0.43
FARP1-222	ENST00000597777	IL27	Q8NEV9	243 aa		12.37	□□□□□ -0.43
FARP1-222	ENST00000597777	TRIM35	Q9UPQ4	493 aa		12.37	□□□□□ -0.43
FARP1-222	ENST00000597777	COL14A1	Q05707	1796 aa	Known RBP	12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	DUSP27	Q5VZP5	1158 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	LNPK	Q9C0E8	428 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	ERBB3	P21860	1342 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	KIAA0232	Q92628	1395 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	RIPK4	P57078	832 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	CALD1	Q05682	793 aa	Known RBP	12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	AEBP1	Q8IUX7	1158 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	PHACTR3	Q96KR7	559 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	CCDC9	Q9Y3X0	531 aa	Known RBP	12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	BECN1	Q14457	450 aa		12.36	□□□□□ -0.43
FARP1-222	ENST00000597777	ANKRD24	Q8TF21	1146 aa		12.35	□□□□□ -0.43
FARP1-222	ENST00000597777	LRRC37A3	O60309	1634 aa		12.35	□□□□□ -0.43
FARP1-222	ENST00000597777	ZC3H6	P61129	1189 aa	Known RBP	12.34	□□□□□ -0.43
FARP1-222	ENST00000597777	GAS2L2	Q8NHY3	880 aa		12.34	□□□□□ -0.43
FARP1-222	ENST00000597777	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.34	□□□□□ -0.43
FARP1-222	ENST00000597777	PLCB2	Q00722	1185 aa		12.34	□□□□□ -0.43
FARP1-222	ENST00000597777	CABLES1	Q8TDN4	633 aa		12.34	□□□□□ -0.43
FARP1-222	ENST00000597777	AXIN2	Q9Y2T1	843 aa		12.34	□□□□□ -0.43
FARP1-222	ENST00000597777	HTATSF1	O43719	755 aa	Known RBP	12.33	□□□□□ -0.44
FARP1-222	ENST00000597777	HSP90AB1	P08238	724 aa	Known RBP	12.33	□□□□□ -0.44
FARP1-222	ENST00000597777	NBPF6	Q5VWK0	638 aa		12.33	□□□□□ -0.44
FARP1-222	ENST00000597777	NBPF4	Q96M43	638 aa		12.33	□□□□□ -0.44
FARP1-222	ENST00000597777	ANKRD45	Q5TZF3	282 aa		12.33	□□□□□ -0.44
FARP1-222	ENST00000597777	CERK	Q8TCT0	537 aa		12.33	□□□□□ -0.44
FARP1-222	ENST00000597777	COL5A2	P05997	1499 aa	Predicted RBP	12.32	□□□□□ -0.44
FARP1-222	ENST00000597777	DCTN1	Q14203	1278 aa		12.32	□□□□□ -0.44
FARP1-222	ENST00000597777	PARP4	Q9UKK3	1724 aa	Known RBP	12.32	□□□□□ -0.44
FARP1-222	ENST00000597777	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.32	□□□□□ -0.44
FARP1-222	ENST00000597777	PKD1L3	Q7Z443	1732 aa		12.32	□□□□□ -0.44
FARP1-222	ENST00000597777	UBAP1L	F5GYI3	381 aa		12.31	□□□□□ -0.44
FARP1-222	ENST00000597777	FRAT2	O75474	233 aa	Predicted RBP	12.31	□□□□□ -0.44
FARP1-222	ENST00000597777	CT47B1	P0C2W7	299 aa	Predicted RBP	12.31	□□□□□ -0.44
FARP1-222	ENST00000597777	EXOSC9	Q06265	439 aa	Known RBP	12.31	□□□□□ -0.44
FARP1-222	ENST00000597777	HAP1	P54257	671 aa	Predicted RBP	12.31	□□□□□ -0.44
FARP1-222	ENST00000597777	PRDM11	Q9NQV5	511 aa		12.31	□□□□□ -0.44
FARP1-222	ENST00000597777	OVOS2	A0A0G2JMS6	1433 aa		12.31	□□□□□ -0.44
FARP1-222	ENST00000597777	BRPF3	Q9ULD4	1205 aa		12.3	□□□□□ -0.44
FARP1-222	ENST00000597777	ADAMTS7	Q9UKP4	1686 aa		12.3	□□□□□ -0.44
FARP1-222	ENST00000597777	AMOT	Q4VCS5	1084 aa		12.3	□□□□□ -0.44
FARP1-222	ENST00000597777	IFT57	Q9NWB7	429 aa		12.3	□□□□□ -0.44
FARP1-222	ENST00000597777	MTHFSD	Q2M296	383 aa	Known RBP	12.3	□□□□□ -0.44
FARP1-222	ENST00000597777	MIS18A	Q9NYP9	233 aa		12.3	□□□□□ -0.44
FARP1-222	ENST00000597777	PLCH1	Q4KWH8	1693 aa		12.3	□□□□□ -0.44
FARP1-222	ENST00000597777	WDR17	Q8IZU2	1322 aa		12.29	□□□□□ -0.44
FARP1-222	ENST00000597777	MAP3K5	Q99683	1374 aa		12.29	□□□□□ -0.44
FARP1-222	ENST00000597777	NWD2	Q9ULI1	1742 aa		12.29	□□□□□ -0.44
FARP1-222	ENST00000597777	GNAI1	P63096	354 aa		12.28	□□□□□ -0.44
FARP1-222	ENST00000597777	FAM161A	Q3B820	660 aa		12.28	□□□□□ -0.44
FARP1-222	ENST00000597777	ZNF853	P0CG23	659 aa		12.28	□□□□□ -0.44
FARP1-222	ENST00000597777	NRAP	Q86VF7	1730 aa		12.28	□□□□□ -0.44
FARP1-222	ENST00000597777	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.28	□□□□□ -0.44
FARP1-222	ENST00000597777	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.28	□□□□□ -0.44
FARP1-222	ENST00000597777	OS9	Q13438	667 aa	Predicted RBP	12.27	□□□□□ -0.44
FARP1-222	ENST00000597777	CHRNA2	Q15822	529 aa		12.27	□□□□□ -0.44
FARP1-222	ENST00000597777	PIP4K2B	P78356	416 aa		12.27	□□□□□ -0.45
FARP1-222	ENST00000597777	USHBP1	Q8N6Y0	703 aa		12.27	□□□□□ -0.45
FARP1-222	ENST00000597777	CFAP44	Q96MT7	982 aa		12.27	□□□□□ -0.45

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