RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 MTFR1LQ9H019 292 aa19.4■□□□□ 0.7
C19orf54-206ENST00000596940 NSD3Q9BZ95 1437 aa19.4■□□□□ 0.7
C19orf54-206ENST00000596940 NHSQ6T4R5 1651 aa19.39■□□□□ 0.69
C19orf54-206ENST00000596940 PDGFDQ9GZP0 370 aaPredicted RBP19.38■□□□□ 0.69
C19orf54-206ENST00000596940 ATF5Q9Y2D1 282 aaPredicted RBP19.38■□□□□ 0.69
C19orf54-206ENST00000596940 USHBP1Q8N6Y0 703 aa19.37■□□□□ 0.69
C19orf54-206ENST00000596940 POLR3GLQ9BT43 218 aa19.37■□□□□ 0.69
C19orf54-206ENST00000596940 PPM1GO15355 546 aaPredicted RBP19.36■□□□□ 0.69
C19orf54-206ENST00000596940 LRRC4BQ9NT99 713 aa19.36■□□□□ 0.69
C19orf54-206ENST00000596940 PCDH11XQ9BZA7 1347 aa19.35■□□□□ 0.69
C19orf54-206ENST00000596940 PCDH11YQ9BZA8 1340 aa19.35■□□□□ 0.69
C19orf54-206ENST00000596940 PTGER2P43116 358 aa19.35■□□□□ 0.69
C19orf54-206ENST00000596940 SLC16A10Q8TF71 515 aa19.35■□□□□ 0.69
C19orf54-206ENST00000596940 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
C19orf54-206ENST00000596940 MEGF6O75095 1541 aa19.35■□□□□ 0.69
C19orf54-206ENST00000596940 WASHC2AQ641Q2 1341 aa19.33■□□□□ 0.69
C19orf54-206ENST00000596940 AKT1S1Q96B36 256 aa19.33■□□□□ 0.68
C19orf54-206ENST00000596940 HSPA5P11021 654 aaKnown RBP19.32■□□□□ 0.68
C19orf54-206ENST00000596940 TFCP2L1Q9NZI6 479 aa19.32■□□□□ 0.68
C19orf54-206ENST00000596940 KAT6BQ8WYB5 2073 aa19.31■□□□□ 0.68
C19orf54-206ENST00000596940 ZNF827Q17R98 1081 aa19.31■□□□□ 0.68
C19orf54-206ENST00000596940 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
C19orf54-206ENST00000596940 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
C19orf54-206ENST00000596940 ARXQ96QS3 562 aa19.3■□□□□ 0.68
C19orf54-206ENST00000596940 CASZ1Q86V15 1759 aa19.29■□□□□ 0.68
C19orf54-206ENST00000596940 POLD1P28340 1107 aa19.29■□□□□ 0.68
C19orf54-206ENST00000596940 SGIP1Q9BQI5 828 aa19.29■□□□□ 0.68
C19orf54-206ENST00000596940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.68
C19orf54-206ENST00000596940 POLKQ9UBT6 870 aa19.29■□□□□ 0.68
C19orf54-206ENST00000596940 BTAF1O14981 1849 aa19.29■□□□□ 0.68
C19orf54-206ENST00000596940 YY1P25490 414 aa19.28■□□□□ 0.68
C19orf54-206ENST00000596940 SYT17Q9BSW7 474 aa19.28■□□□□ 0.68
C19orf54-206ENST00000596940 FHDC1Q9C0D6 1143 aaPredicted RBP19.28■□□□□ 0.68
C19orf54-206ENST00000596940 NSD2O96028 1365 aa19.28■□□□□ 0.68
C19orf54-206ENST00000596940 CYP27B1O15528 508 aa19.27■□□□□ 0.68
C19orf54-206ENST00000596940 SMARCC1Q92922 1105 aaPredicted RBP19.27■□□□□ 0.68
C19orf54-206ENST00000596940 PANK3Q9H999 370 aa19.27■□□□□ 0.68
C19orf54-206ENST00000596940 KIF20BQ96Q89 1820 aa19.26■□□□□ 0.67
C19orf54-206ENST00000596940 MPRIPQ6WCQ1 1025 aa19.26■□□□□ 0.67
C19orf54-206ENST00000596940 EYA1Q99502 592 aa19.26■□□□□ 0.67
C19orf54-206ENST00000596940 TNNT2P45379 298 aaPredicted RBP19.25■□□□□ 0.67
C19orf54-206ENST00000596940 KCNQ4P56696 695 aa19.25■□□□□ 0.67
C19orf54-206ENST00000596940 NKX1-1Q15270 411 aaPredicted RBP19.25■□□□□ 0.67
C19orf54-206ENST00000596940 PNPLA7Q6ZV29 1317 aa19.25■□□□□ 0.67
C19orf54-206ENST00000596940 FLAD1Q8NFF5 587 aa19.24■□□□□ 0.67
C19orf54-206ENST00000596940 PAPPAQ13219 1627 aa19.24■□□□□ 0.67
C19orf54-206ENST00000596940 MYOM1P52179 1685 aa19.24■□□□□ 0.67
C19orf54-206ENST00000596940 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
C19orf54-206ENST00000596940 MAP3K5Q99683 1374 aa19.22■□□□□ 0.67
C19orf54-206ENST00000596940 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
C19orf54-206ENST00000596940 MSH5O43196 834 aa19.22■□□□□ 0.67
C19orf54-206ENST00000596940 IFNL2Q8IZJ0 200 aa19.22■□□□□ 0.67
C19orf54-206ENST00000596940 NCAPD2Q15021 1401 aa19.22■□□□□ 0.67
C19orf54-206ENST00000596940 PALLDQ8WX93 1383 aa19.21■□□□□ 0.67
C19orf54-206ENST00000596940 EIF4A2Q14240 407 aaKnown RBP19.21■□□□□ 0.67
C19orf54-206ENST00000596940 MORC1Q86VD1 984 aa19.21■□□□□ 0.67
C19orf54-206ENST00000596940 RGPD2P0DJD1 1756 aa19.2■□□□□ 0.66
C19orf54-206ENST00000596940 PIGBQ92521 554 aa19.19■□□□□ 0.66
C19orf54-206ENST00000596940 TMOD3Q9NYL9 352 aa19.19■□□□□ 0.66
C19orf54-206ENST00000596940 DOT1LQ8TEK3 1739 aa19.19■□□□□ 0.66
C19orf54-206ENST00000596940 HSP90AB1P08238 724 aaKnown RBP19.17■□□□□ 0.66
C19orf54-206ENST00000596940 PHKG2P15735 406 aa19.17■□□□□ 0.66
C19orf54-206ENST00000596940 PLEKHO1Q53GL0 409 aaPredicted RBP19.17■□□□□ 0.66
C19orf54-206ENST00000596940 COL23A1Q86Y22 540 aaPredicted RBP19.17■□□□□ 0.66
C19orf54-206ENST00000596940 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
C19orf54-206ENST00000596940 KLHL34Q8N239 644 aa19.16■□□□□ 0.66
C19orf54-206ENST00000596940 AK7Q96M32 723 aa19.16■□□□□ 0.66
C19orf54-206ENST00000596940 IGSF1Q8N6C5 1336 aa19.16■□□□□ 0.66
C19orf54-206ENST00000596940 SHANK3Q9BYB0 1731 aa19.16■□□□□ 0.66
C19orf54-206ENST00000596940 GPR162Q16538 588 aa19.14■□□□□ 0.65
C19orf54-206ENST00000596940 LOC102724428A0A0B4J2F2 783 aa19.13■□□□□ 0.65
C19orf54-206ENST00000596940 SIK1P57059 783 aa19.13■□□□□ 0.65
C19orf54-206ENST00000596940 DCAF5Q96JK2 942 aa19.13■□□□□ 0.65
C19orf54-206ENST00000596940 LY75O60449 1722 aa19.13■□□□□ 0.65
C19orf54-206ENST00000596940 ANKRD26Q9UPS8 1709 aa19.13■□□□□ 0.65
C19orf54-206ENST00000596940 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
C19orf54-206ENST00000596940 QSER1Q2KHR3 1735 aa19.11■□□□□ 0.65
C19orf54-206ENST00000596940 MAP2P11137 1827 aaKnown RBP19.1■□□□□ 0.65
C19orf54-206ENST00000596940 SSFA2P28290 1259 aa19.1■□□□□ 0.65
C19orf54-206ENST00000596940 ATP6V1AP38606 617 aa19.1■□□□□ 0.65
C19orf54-206ENST00000596940 ASAP1Q9ULH1 1129 aa19.1■□□□□ 0.65
C19orf54-206ENST00000596940 PKD1L3Q7Z443 1732 aa19.1■□□□□ 0.65
C19orf54-206ENST00000596940 KIF7Q2M1P5 1343 aa19.09■□□□□ 0.65
C19orf54-206ENST00000596940 C1orf141Q5JVX7 400 aa19.09■□□□□ 0.65
C19orf54-206ENST00000596940 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
C19orf54-206ENST00000596940 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
C19orf54-206ENST00000596940 MSL1Q68DK7 614 aa19.08■□□□□ 0.64
C19orf54-206ENST00000596940 ATG3Q9NT62 314 aa19.08■□□□□ 0.64
C19orf54-206ENST00000596940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
C19orf54-206ENST00000596940 GRIN3BO60391 1043 aa19.07■□□□□ 0.64
C19orf54-206ENST00000596940 MTHFSP49914 203 aa19.07■□□□□ 0.64
C19orf54-206ENST00000596940 CABP4P57796 275 aa19.07■□□□□ 0.64
C19orf54-206ENST00000596940 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
C19orf54-206ENST00000596940 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
C19orf54-206ENST00000596940 CD2APQ9Y5K6 639 aa19.07■□□□□ 0.64
C19orf54-206ENST00000596940 PHF14O94880 888 aa19.06■□□□□ 0.64
C19orf54-206ENST00000596940 IL13P35225 146 aa19.05■□□□□ 0.64
C19orf54-206ENST00000596940 LINC00116Q8NCU8 138 aa19.05■□□□□ 0.64
C19orf54-206ENST00000596940 GNPATO15228 680 aa19.04■□□□□ 0.64
C19orf54-206ENST00000596940 ITPK1Q13572 414 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms