RNA–Protein interactions for RNA: ENST00000596380.5

USF2-208, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-208ENST00000596380 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
USF2-208ENST00000596380 RGPD2P0DJD1 1756 aa22.53■■□□□ 1.2
USF2-208ENST00000596380 KDRP35968 1356 aa22.53■■□□□ 1.2
USF2-208ENST00000596380 MEGF6O75095 1541 aa22.52■■□□□ 1.2
USF2-208ENST00000596380 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
USF2-208ENST00000596380 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
USF2-208ENST00000596380 AMOTQ4VCS5 1084 aa22.51■■□□□ 1.19
USF2-208ENST00000596380 COL3A1P02461 1466 aaPredicted RBP22.49■■□□□ 1.19
USF2-208ENST00000596380 MYBBP1AQ9BQG0 1328 aaKnown RBP22.49■■□□□ 1.19
USF2-208ENST00000596380 RGPD1P0DJD0 1748 aa22.48■■□□□ 1.19
USF2-208ENST00000596380 PLEKHO1Q53GL0 409 aaPredicted RBP22.48■■□□□ 1.19
USF2-208ENST00000596380 FAM182BQ5T319 152 aa22.48■■□□□ 1.19
USF2-208ENST00000596380 SULT6B1Q6IMI4 303 aa22.48■■□□□ 1.19
USF2-208ENST00000596380 DDX54Q8TDD1 881 aaKnown RBP22.48■■□□□ 1.19
USF2-208ENST00000596380 BCL11BQ9C0K0 894 aaPredicted RBP22.48■■□□□ 1.19
USF2-208ENST00000596380 BAG6P46379 1132 aa22.47■■□□□ 1.19
USF2-208ENST00000596380 PRKRIP1Q9H875 184 aaPredicted RBP22.47■■□□□ 1.19
USF2-208ENST00000596380 TRIM37O94972 964 aa22.45■■□□□ 1.18
USF2-208ENST00000596380 NKX1-1Q15270 411 aaPredicted RBP22.45■■□□□ 1.18
USF2-208ENST00000596380 HSP90AB1P08238 724 aaKnown RBP22.44■■□□□ 1.18
USF2-208ENST00000596380 PKD1L3Q7Z443 1732 aa22.44■■□□□ 1.18
USF2-208ENST00000596380 IFNL2Q8IZJ0 200 aa22.44■■□□□ 1.18
USF2-208ENST00000596380 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
USF2-208ENST00000596380 PLSCR1O15162 318 aa22.41■■□□□ 1.18
USF2-208ENST00000596380 CYP27B1O15528 508 aa22.41■■□□□ 1.18
USF2-208ENST00000596380 FCHSD2O94868 740 aa22.41■■□□□ 1.18
USF2-208ENST00000596380 AEBP1Q8IUX7 1158 aa22.41■■□□□ 1.18
USF2-208ENST00000596380 PNNQ9H307 717 aaKnown RBP22.41■■□□□ 1.18
USF2-208ENST00000596380 APBA3O96018 575 aa22.4■■□□□ 1.18
USF2-208ENST00000596380 PHKG2P15735 406 aa22.39■■□□□ 1.17
USF2-208ENST00000596380 SHANK3Q9BYB0 1731 aa22.38■■□□□ 1.17
USF2-208ENST00000596380 ANP32CO43423 234 aa22.38■■□□□ 1.17
USF2-208ENST00000596380 HMOX1P09601 288 aa22.38■■□□□ 1.17
USF2-208ENST00000596380 HMGB2P26583 209 aaKnown RBP22.38■■□□□ 1.17
USF2-208ENST00000596380 C1orf141Q5JVX7 400 aa22.38■■□□□ 1.17
USF2-208ENST00000596380 SBF2Q86WG5 1849 aa22.38■■□□□ 1.17
USF2-208ENST00000596380 U2AF1L5P0DN76 240 aaPredicted RBP22.37■■□□□ 1.17
USF2-208ENST00000596380 U2AF1Q01081 240 aaKnown RBP eCLIP22.37■■□□□ 1.17
USF2-208ENST00000596380 DCAF5Q96JK2 942 aa22.37■■□□□ 1.17
USF2-208ENST00000596380 NHSQ6T4R5 1651 aa22.36■■□□□ 1.17
USF2-208ENST00000596380 TNS1Q9HBL0 1735 aaKnown RBP22.35■■□□□ 1.17
USF2-208ENST00000596380 ZNF530Q6P9A1 599 aaPredicted RBP22.35■■□□□ 1.17
USF2-208ENST00000596380 ERVV-2B6SEH9 535 aa22.34■■□□□ 1.17
USF2-208ENST00000596380 NEFMP07197 916 aa22.34■■□□□ 1.17
USF2-208ENST00000596380 AKAP4Q5JQC9 854 aa22.34■■□□□ 1.17
USF2-208ENST00000596380 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
USF2-208ENST00000596380 CAMKK2Q96RR4 588 aa22.34■■□□□ 1.17
USF2-208ENST00000596380 RSPH6AQ9H0K4 717 aa22.34■■□□□ 1.17
USF2-208ENST00000596380 PRIM1P49642 420 aaKnown RBP22.33■■□□□ 1.17
USF2-208ENST00000596380 ACSBG1Q96GR2 724 aa22.33■■□□□ 1.17
USF2-208ENST00000596380 KCNQ2O43526 872 aa22.32■■□□□ 1.16
USF2-208ENST00000596380 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
USF2-208ENST00000596380 DEFB132Q7Z7B7 95 aa22.32■■□□□ 1.16
USF2-208ENST00000596380 RGPD3A6NKT7 1758 aaPredicted RBP22.32■■□□□ 1.16
USF2-208ENST00000596380 RGPD4Q7Z3J3 1758 aa22.32■■□□□ 1.16
USF2-208ENST00000596380 PRKAR2BP31323 418 aa22.3■■□□□ 1.16
USF2-208ENST00000596380 SYTL4Q96C24 671 aaPredicted RBP22.3■■□□□ 1.16
USF2-208ENST00000596380 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
USF2-208ENST00000596380 SMARCC1Q92922 1105 aaPredicted RBP22.28■■□□□ 1.16
USF2-208ENST00000596380 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
USF2-208ENST00000596380 TMOD3Q9NYL9 352 aa22.27■■□□□ 1.16
USF2-208ENST00000596380 HTATSF1O43719 755 aaKnown RBP22.26■■□□□ 1.15
USF2-208ENST00000596380 EZH2Q15910 746 aaKnown RBP22.26■■□□□ 1.15
USF2-208ENST00000596380 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
USF2-208ENST00000596380 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
USF2-208ENST00000596380 KAT6BQ8WYB5 2073 aa22.26■■□□□ 1.15
USF2-208ENST00000596380 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
USF2-208ENST00000596380 GNAT3A8MTJ3 354 aa22.25■■□□□ 1.15
USF2-208ENST00000596380 MPRIPQ6WCQ1 1025 aa22.25■■□□□ 1.15
USF2-208ENST00000596380 PHACTR3Q96KR7 559 aa22.24■■□□□ 1.15
USF2-208ENST00000596380 BTAF1O14981 1849 aa22.23■■□□□ 1.15
USF2-208ENST00000596380 CABP4P57796 275 aa22.23■■□□□ 1.15
USF2-208ENST00000596380 TXNRD1Q16881 649 aa22.23■■□□□ 1.15
USF2-208ENST00000596380 NBPF14Q5TI25 921 aa22.23■■□□□ 1.15
USF2-208ENST00000596380 PIGBQ92521 554 aa22.23■■□□□ 1.15
USF2-208ENST00000596380 PLEKHF1Q96S99 279 aa22.23■■□□□ 1.15
USF2-208ENST00000596380 MAP3K5Q99683 1374 aa22.23■■□□□ 1.15
USF2-208ENST00000596380 MAPK8IP3Q9UPT6 1336 aa22.22■■□□□ 1.15
USF2-208ENST00000596380 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
USF2-208ENST00000596380 RNMTO43148 476 aaKnown RBP22.21■■□□□ 1.15
USF2-208ENST00000596380 PROM2Q8N271 834 aa22.2■■□□□ 1.14
USF2-208ENST00000596380 RTF1Q92541 710 aaKnown RBP22.19■■□□□ 1.14
USF2-208ENST00000596380 SLC52A2Q9HAB3 445 aa22.19■■□□□ 1.14
USF2-208ENST00000596380 RREB1Q92766 1687 aa22.19■■□□□ 1.14
USF2-208ENST00000596380 TOGARAM1Q9Y4F4 1720 aa22.19■■□□□ 1.14
USF2-208ENST00000596380 ITGB4P16144 1822 aa22.17■■□□□ 1.14
USF2-208ENST00000596380 ADAMTS7Q9UKP4 1686 aa22.17■■□□□ 1.14
USF2-208ENST00000596380 NFE2L2Q16236 605 aa22.17■■□□□ 1.14
USF2-208ENST00000596380 NFATC2IPQ8NCF5 419 aa22.17■■□□□ 1.14
USF2-208ENST00000596380 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
USF2-208ENST00000596380 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
USF2-208ENST00000596380 PALLDQ8WX93 1383 aa22.16■■□□□ 1.14
USF2-208ENST00000596380 LGR6Q9HBX8 967 aa22.16■■□□□ 1.14
USF2-208ENST00000596380 SCN11AQ9UI33 1791 aa22.16■■□□□ 1.14
USF2-208ENST00000596380 MRC1P22897 1456 aa22.15■■□□□ 1.14
USF2-208ENST00000596380 CEMIPQ8WUJ3 1361 aa22.15■■□□□ 1.14
USF2-208ENST00000596380 TEFQ10587 303 aa22.15■■□□□ 1.14
USF2-208ENST00000596380 LMOD3Q0VAK6 560 aa22.14■■□□□ 1.13
USF2-208ENST00000596380 IL17REQ8NFR9 667 aa22.14■■□□□ 1.13
USF2-208ENST00000596380 MRS2Q9HD23 443 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms