RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 NBPF4Q96M43 638 aa22.28■■□□□ 1.16
LINC02560-201ENST00000596379 ARXQ96QS3 562 aa22.27■■□□□ 1.16
LINC02560-201ENST00000596379 RTL1A6NKG5 1358 aa22.26■■□□□ 1.15
LINC02560-201ENST00000596379 KCNQ4P56696 695 aa22.26■■□□□ 1.15
LINC02560-201ENST00000596379 MEGF6O75095 1541 aa22.26■■□□□ 1.15
LINC02560-201ENST00000596379 SHANK3Q9BYB0 1731 aa22.26■■□□□ 1.15
LINC02560-201ENST00000596379 USHBP1Q8N6Y0 703 aa22.25■■□□□ 1.15
LINC02560-201ENST00000596379 DOT1LQ8TEK3 1739 aa22.24■■□□□ 1.15
LINC02560-201ENST00000596379 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
LINC02560-201ENST00000596379 NSD2O96028 1365 aa22.23■■□□□ 1.15
LINC02560-201ENST00000596379 HSP90AB2PQ58FF8 381 aa22.22■■□□□ 1.15
LINC02560-201ENST00000596379 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
LINC02560-201ENST00000596379 TFCP2L1Q9NZI6 479 aa22.22■■□□□ 1.15
LINC02560-201ENST00000596379 RAPGEF4Q8WZA2 1011 aa22.21■■□□□ 1.15
LINC02560-201ENST00000596379 CGNL1Q0VF96 1302 aa22.21■■□□□ 1.15
LINC02560-201ENST00000596379 PNPLA7Q6ZV29 1317 aa22.21■■□□□ 1.15
LINC02560-201ENST00000596379 LY75O60449 1722 aa22.2■■□□□ 1.14
LINC02560-201ENST00000596379 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
LINC02560-201ENST00000596379 QSER1Q2KHR3 1735 aa22.2■■□□□ 1.14
LINC02560-201ENST00000596379 KIF20BQ96Q89 1820 aa22.2■■□□□ 1.14
LINC02560-201ENST00000596379 TATP17735 454 aaPredicted RBP22.19■■□□□ 1.14
LINC02560-201ENST00000596379 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
LINC02560-201ENST00000596379 INSRP06213 1382 aa22.18■■□□□ 1.14
LINC02560-201ENST00000596379 CCNL1Q9UK58 526 aaPredicted RBP22.18■■□□□ 1.14
LINC02560-201ENST00000596379 TUBGCP6Q96RT7 1819 aa22.17■■□□□ 1.14
LINC02560-201ENST00000596379 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
LINC02560-201ENST00000596379 POLD1P28340 1107 aa22.17■■□□□ 1.14
LINC02560-201ENST00000596379 FLT4P35916 1363 aa22.16■■□□□ 1.14
LINC02560-201ENST00000596379 KLHL34Q8N239 644 aa22.15■■□□□ 1.14
LINC02560-201ENST00000596379 KIF24Q5T7B8 1368 aa22.14■■□□□ 1.14
LINC02560-201ENST00000596379 CHD4Q14839 1912 aa22.14■■□□□ 1.14
LINC02560-201ENST00000596379 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
LINC02560-201ENST00000596379 PCDH11XQ9BZA7 1347 aa22.13■■□□□ 1.13
LINC02560-201ENST00000596379 PCDH11YQ9BZA8 1340 aa22.13■■□□□ 1.13
LINC02560-201ENST00000596379 ZNF784Q8NCA9 323 aaPredicted RBP22.13■■□□□ 1.13
LINC02560-201ENST00000596379 COL24A1Q17RW2 1714 aa22.13■■□□□ 1.13
LINC02560-201ENST00000596379 NSD3Q9BZ95 1437 aa22.13■■□□□ 1.13
LINC02560-201ENST00000596379 GPR162Q16538 588 aa22.12■■□□□ 1.13
LINC02560-201ENST00000596379 UTRNP46939 3433 aa22.12■■□□□ 1.13
LINC02560-201ENST00000596379 PPM1GO15355 546 aaPredicted RBP22.11■■□□□ 1.13
LINC02560-201ENST00000596379 MSH5O43196 834 aa22.11■■□□□ 1.13
LINC02560-201ENST00000596379 MPRIPQ6WCQ1 1025 aa22.11■■□□□ 1.13
LINC02560-201ENST00000596379 COL23A1Q86Y22 540 aaPredicted RBP22.11■■□□□ 1.13
LINC02560-201ENST00000596379 TIMELESSQ9UNS1 1208 aa22.11■■□□□ 1.13
LINC02560-201ENST00000596379 CYP27B1O15528 508 aa22.1■■□□□ 1.13
LINC02560-201ENST00000596379 MAP2P11137 1827 aaKnown RBP22.07■■□□□ 1.12
LINC02560-201ENST00000596379 PELP1Q8IZL8 1130 aaKnown RBP22.06■■□□□ 1.12
LINC02560-201ENST00000596379 NLGN2Q8NFZ4 835 aa22.06■■□□□ 1.12
LINC02560-201ENST00000596379 PALLDQ8WX93 1383 aa22.06■■□□□ 1.12
LINC02560-201ENST00000596379 ITGB4P16144 1822 aa22.06■■□□□ 1.12
LINC02560-201ENST00000596379 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
LINC02560-201ENST00000596379 C5P01031 1676 aa22.05■■□□□ 1.12
LINC02560-201ENST00000596379 POLR3GLQ9BT43 218 aa22.05■■□□□ 1.12
LINC02560-201ENST00000596379 PCGF6Q9BYE7 350 aa22.05■■□□□ 1.12
LINC02560-201ENST00000596379 MSL1Q68DK7 614 aa22.04■■□□□ 1.12
LINC02560-201ENST00000596379 TAF1LQ8IZX4 1826 aa22.03■■□□□ 1.12
LINC02560-201ENST00000596379 PKD1L3Q7Z443 1732 aa22.03■■□□□ 1.12
LINC02560-201ENST00000596379 TOGARAM1Q9Y4F4 1720 aa22.03■■□□□ 1.12
LINC02560-201ENST00000596379 HMGB2P26583 209 aaKnown RBP22.03■■□□□ 1.12
LINC02560-201ENST00000596379 SMARCC1Q92922 1105 aaPredicted RBP22.03■■□□□ 1.12
LINC02560-201ENST00000596379 EYA1Q99502 592 aa22.03■■□□□ 1.12
LINC02560-201ENST00000596379 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
LINC02560-201ENST00000596379 NKX1-1Q15270 411 aaPredicted RBP22.02■■□□□ 1.12
LINC02560-201ENST00000596379 PIGBQ92521 554 aa22.02■■□□□ 1.12
LINC02560-201ENST00000596379 POLKQ9UBT6 870 aa22.02■■□□□ 1.12
LINC02560-201ENST00000596379 NCAPD2Q15021 1401 aa22.02■■□□□ 1.12
LINC02560-201ENST00000596379 ANKRD26Q9UPS8 1709 aa22.02■■□□□ 1.12
LINC02560-201ENST00000596379 FLAD1Q8NFF5 587 aa22.01■■□□□ 1.11
LINC02560-201ENST00000596379 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
LINC02560-201ENST00000596379 TNNT2P45379 298 aaPredicted RBP21.99■■□□□ 1.11
LINC02560-201ENST00000596379 AK7Q96M32 723 aa21.98■■□□□ 1.11
LINC02560-201ENST00000596379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.98■■□□□ 1.11
LINC02560-201ENST00000596379 C4BP0C0L5 1744 aa21.97■■□□□ 1.11
LINC02560-201ENST00000596379 YBX3P16989 372 aaKnown RBP eCLIP21.96■■□□□ 1.11
LINC02560-201ENST00000596379 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
LINC02560-201ENST00000596379 AMIGO3Q86WK7 504 aa21.96■■□□□ 1.11
LINC02560-201ENST00000596379 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
LINC02560-201ENST00000596379 SMIM5Q71RC9 77 aa21.95■■□□□ 1.1
LINC02560-201ENST00000596379 TMOD3Q9NYL9 352 aa21.95■■□□□ 1.1
LINC02560-201ENST00000596379 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
LINC02560-201ENST00000596379 GRIN3BO60391 1043 aa21.94■■□□□ 1.1
LINC02560-201ENST00000596379 PHF14O94880 888 aa21.94■■□□□ 1.1
LINC02560-201ENST00000596379 PHKG2P15735 406 aa21.94■■□□□ 1.1
LINC02560-201ENST00000596379 SIK1P57059 783 aa21.94■■□□□ 1.1
LINC02560-201ENST00000596379 CD2APQ9Y5K6 639 aa21.94■■□□□ 1.1
LINC02560-201ENST00000596379 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
LINC02560-201ENST00000596379 UBR3Q6ZT12 1888 aa21.93■■□□□ 1.1
LINC02560-201ENST00000596379 LINC00116Q8NCU8 138 aa21.93■■□□□ 1.1
LINC02560-201ENST00000596379 PANK3Q9H999 370 aa21.93■■□□□ 1.1
LINC02560-201ENST00000596379 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
LINC02560-201ENST00000596379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
LINC02560-201ENST00000596379 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
LINC02560-201ENST00000596379 C1QTNF8P60827 252 aa21.91■■□□□ 1.1
LINC02560-201ENST00000596379 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
LINC02560-201ENST00000596379 ITPK1Q13572 414 aa21.9■■□□□ 1.1
LINC02560-201ENST00000596379 GOLGB1Q14789 3259 aaKnown RBP21.9■■□□□ 1.1
LINC02560-201ENST00000596379 SSFA2P28290 1259 aa21.89■■□□□ 1.09
LINC02560-201ENST00000596379 ATG3Q9NT62 314 aa21.89■■□□□ 1.09
LINC02560-201ENST00000596379 IGSF1Q8N6C5 1336 aa21.87■■□□□ 1.09
LINC02560-201ENST00000596379 GNPATO15228 680 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms