RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-208ENST00000596304 FYB1O15117 783 aa19.25■□□□□ 0.67
UBA52-208ENST00000596304 TMF1P82094 1093 aa19.25■□□□□ 0.67
UBA52-208ENST00000596304 COL24A1Q17RW2 1714 aa19.25■□□□□ 0.67
UBA52-208ENST00000596304 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
UBA52-208ENST00000596304 NSD2O96028 1365 aa19.23■□□□□ 0.67
UBA52-208ENST00000596304 PRIM1P49642 420 aaKnown RBP19.23■□□□□ 0.67
UBA52-208ENST00000596304 KCNQ4P56696 695 aa19.23■□□□□ 0.67
UBA52-208ENST00000596304 ZCRB1Q8TBF4 217 aaKnown RBP19.23■□□□□ 0.67
UBA52-208ENST00000596304 AKT1S1Q96B36 256 aa19.23■□□□□ 0.67
UBA52-208ENST00000596304 SLC27A3Q5K4L6 730 aa19.22■□□□□ 0.67
UBA52-208ENST00000596304 NBPF6Q5VWK0 638 aa19.22■□□□□ 0.67
UBA52-208ENST00000596304 USHBP1Q8N6Y0 703 aa19.22■□□□□ 0.67
UBA52-208ENST00000596304 NBPF4Q96M43 638 aa19.22■□□□□ 0.67
UBA52-208ENST00000596304 ARXQ96QS3 562 aa19.22■□□□□ 0.67
UBA52-208ENST00000596304 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
UBA52-208ENST00000596304 PNPLA7Q6ZV29 1317 aa19.2■□□□□ 0.66
UBA52-208ENST00000596304 SMG6Q86US8 1419 aaKnown RBP19.19■□□□□ 0.66
UBA52-208ENST00000596304 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
UBA52-208ENST00000596304 ITGB4P16144 1822 aa19.18■□□□□ 0.66
UBA52-208ENST00000596304 TAF1LQ8IZX4 1826 aa19.18■□□□□ 0.66
UBA52-208ENST00000596304 HSP90AB2PQ58FF8 381 aa19.17■□□□□ 0.66
UBA52-208ENST00000596304 C5P01031 1676 aa19.17■□□□□ 0.66
UBA52-208ENST00000596304 MAP3K5Q99683 1374 aa19.17■□□□□ 0.66
UBA52-208ENST00000596304 TOGARAM1Q9Y4F4 1720 aa19.17■□□□□ 0.66
UBA52-208ENST00000596304 SLC16A10Q8TF71 515 aa19.16■□□□□ 0.66
UBA52-208ENST00000596304 RAPGEF4Q8WZA2 1011 aa19.16■□□□□ 0.66
UBA52-208ENST00000596304 TFCP2L1Q9NZI6 479 aa19.16■□□□□ 0.66
UBA52-208ENST00000596304 INSRP06213 1382 aa19.16■□□□□ 0.66
UBA52-208ENST00000596304 FLT4P35916 1363 aa19.16■□□□□ 0.66
UBA52-208ENST00000596304 PKD1L3Q7Z443 1732 aa19.15■□□□□ 0.66
UBA52-208ENST00000596304 ANKRD26Q9UPS8 1709 aa19.15■□□□□ 0.66
UBA52-208ENST00000596304 CGNL1Q0VF96 1302 aa19.15■□□□□ 0.66
UBA52-208ENST00000596304 TATP17735 454 aaPredicted RBP19.14■□□□□ 0.65
UBA52-208ENST00000596304 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
UBA52-208ENST00000596304 KLHL34Q8N239 644 aa19.14■□□□□ 0.65
UBA52-208ENST00000596304 CARD14Q9BXL6 1004 aa19.14■□□□□ 0.65
UBA52-208ENST00000596304 CCNL1Q9UK58 526 aaPredicted RBP19.14■□□□□ 0.65
UBA52-208ENST00000596304 NSD3Q9BZ95 1437 aa19.14■□□□□ 0.65
UBA52-208ENST00000596304 UTRNP46939 3433 aa19.14■□□□□ 0.65
UBA52-208ENST00000596304 EMILIN1Q9Y6C2 1016 aa19.13■□□□□ 0.65
UBA52-208ENST00000596304 KIF24Q5T7B8 1368 aa19.12■□□□□ 0.65
UBA52-208ENST00000596304 POLD1P28340 1107 aa19.12■□□□□ 0.65
UBA52-208ENST00000596304 PCDH11XQ9BZA7 1347 aa19.11■□□□□ 0.65
UBA52-208ENST00000596304 PCDH11YQ9BZA8 1340 aa19.11■□□□□ 0.65
UBA52-208ENST00000596304 ZNF784Q8NCA9 323 aaPredicted RBP19.11■□□□□ 0.65
UBA52-208ENST00000596304 CYP27B1O15528 508 aa19.08■□□□□ 0.64
UBA52-208ENST00000596304 COL23A1Q86Y22 540 aaPredicted RBP19.08■□□□□ 0.64
UBA52-208ENST00000596304 NCAPD2Q15021 1401 aa19.08■□□□□ 0.64
UBA52-208ENST00000596304 MSH5O43196 834 aa19.07■□□□□ 0.64
UBA52-208ENST00000596304 GPR162Q16538 588 aa19.07■□□□□ 0.64
UBA52-208ENST00000596304 NLGN2Q8NFZ4 835 aa19.07■□□□□ 0.64
UBA52-208ENST00000596304 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
UBA52-208ENST00000596304 C4BP0C0L5 1744 aa19.06■□□□□ 0.64
UBA52-208ENST00000596304 UBR3Q6ZT12 1888 aa19.06■□□□□ 0.64
UBA52-208ENST00000596304 PPM1GO15355 546 aaPredicted RBP19.06■□□□□ 0.64
UBA52-208ENST00000596304 MPRIPQ6WCQ1 1025 aa19.06■□□□□ 0.64
UBA52-208ENST00000596304 MSL1Q68DK7 614 aa19.04■□□□□ 0.64
UBA52-208ENST00000596304 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
UBA52-208ENST00000596304 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
UBA52-208ENST00000596304 WASHC2AQ641Q2 1341 aa19.02■□□□□ 0.64
UBA52-208ENST00000596304 EYA1Q99502 592 aa19.02■□□□□ 0.64
UBA52-208ENST00000596304 POLR3GLQ9BT43 218 aa19.02■□□□□ 0.64
UBA52-208ENST00000596304 PIGBQ92521 554 aa19■□□□□ 0.63
UBA52-208ENST00000596304 POLKQ9UBT6 870 aa19■□□□□ 0.63
UBA52-208ENST00000596304 NKX1-1Q15270 411 aaPredicted RBP18.99■□□□□ 0.63
UBA52-208ENST00000596304 AMIGO3Q86WK7 504 aa18.99■□□□□ 0.63
UBA52-208ENST00000596304 SMARCC1Q92922 1105 aaPredicted RBP18.99■□□□□ 0.63
UBA52-208ENST00000596304 PCGF6Q9BYE7 350 aa18.99■□□□□ 0.63
UBA52-208ENST00000596304 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
UBA52-208ENST00000596304 YBX3P16989 372 aaKnown RBP eCLIP18.97■□□□□ 0.634e-54■■□□□ 13.2
UBA52-208ENST00000596304 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
UBA52-208ENST00000596304 SMIM5Q71RC9 77 aa18.97■□□□□ 0.63
UBA52-208ENST00000596304 FLAD1Q8NFF5 587 aa18.97■□□□□ 0.63
UBA52-208ENST00000596304 AK7Q96M32 723 aa18.97■□□□□ 0.63
UBA52-208ENST00000596304 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
UBA52-208ENST00000596304 GOLGB1Q14789 3259 aaKnown RBP18.95■□□□□ 0.62
UBA52-208ENST00000596304 PHF14O94880 888 aa18.95■□□□□ 0.62
UBA52-208ENST00000596304 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
UBA52-208ENST00000596304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.95■□□□□ 0.62
UBA52-208ENST00000596304 PHKG2P15735 406 aa18.94■□□□□ 0.62
UBA52-208ENST00000596304 HMGB2P26583 209 aaKnown RBP18.94■□□□□ 0.62
UBA52-208ENST00000596304 IFNL2Q8IZJ0 200 aa18.94■□□□□ 0.62
UBA52-208ENST00000596304 LINC00116Q8NCU8 138 aa18.94■□□□□ 0.62
UBA52-208ENST00000596304 LOC102724428A0A0B4J2F2 783 aa18.93■□□□□ 0.62
UBA52-208ENST00000596304 SIK1P57059 783 aa18.93■□□□□ 0.62
UBA52-208ENST00000596304 TMOD3Q9NYL9 352 aa18.93■□□□□ 0.62
UBA52-208ENST00000596304 ASAP1Q9ULH1 1129 aa18.93■□□□□ 0.62
UBA52-208ENST00000596304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.92■□□□□ 0.62
UBA52-208ENST00000596304 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
UBA52-208ENST00000596304 C1QTNF8P60827 252 aa18.92■□□□□ 0.62
UBA52-208ENST00000596304 GRIN3BO60391 1043 aa18.91■□□□□ 0.62
UBA52-208ENST00000596304 ITPK1Q13572 414 aa18.91■□□□□ 0.62
UBA52-208ENST00000596304 CD2APQ9Y5K6 639 aa18.91■□□□□ 0.62
UBA52-208ENST00000596304 EIF4G2P78344 907 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBA52-208ENST00000596304 PANK3Q9H999 370 aa18.9■□□□□ 0.62
UBA52-208ENST00000596304 IGSF1Q8N6C5 1336 aa18.9■□□□□ 0.62
UBA52-208ENST00000596304 COL5A3P25940 1745 aaPredicted RBP18.89■□□□□ 0.61
UBA52-208ENST00000596304 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
UBA52-208ENST00000596304 SSFA2P28290 1259 aa18.89■□□□□ 0.61
UBA52-208ENST00000596304 ATP6V1AP38606 617 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms