RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 NSD2O96028 1365 aa30.26■■■□□ 2.43
USF2-204ENST00000593708 TRIM26Q12899 539 aaPredicted RBP30.25■■■□□ 2.43
USF2-204ENST00000593708 FHDC1Q9C0D6 1143 aaPredicted RBP30.25■■■□□ 2.43
USF2-204ENST00000593708 NBPF6Q5VWK0 638 aa30.22■■■□□ 2.43
USF2-204ENST00000593708 AKT1S1Q96B36 256 aa30.22■■■□□ 2.43
USF2-204ENST00000593708 NBPF4Q96M43 638 aa30.22■■■□□ 2.43
USF2-204ENST00000593708 DCAF8L1A6NGE4 600 aa30.21■■■□□ 2.43
USF2-204ENST00000593708 PRIM1P49642 420 aaKnown RBP30.21■■■□□ 2.43
USF2-204ENST00000593708 KCNQ4P56696 695 aa30.21■■■□□ 2.43
USF2-204ENST00000593708 USHBP1Q8N6Y0 703 aa30.21■■■□□ 2.43
USF2-204ENST00000593708 SYT17Q9BSW7 474 aa30.21■■■□□ 2.43
USF2-204ENST00000593708 ZCRB1Q8TBF4 217 aaKnown RBP30.2■■■□□ 2.43
USF2-204ENST00000593708 SYTL4Q96C24 671 aaPredicted RBP30.2■■■□□ 2.43
USF2-204ENST00000593708 COL24A1Q17RW2 1714 aa30.19■■■□□ 2.42
USF2-204ENST00000593708 SLC27A3Q5K4L6 730 aa30.18■■■□□ 2.42
USF2-204ENST00000593708 HSP90AB2PQ58FF8 381 aa30.15■■■□□ 2.42
USF2-204ENST00000593708 ARXQ96QS3 562 aa30.15■■■□□ 2.42
USF2-204ENST00000593708 PNPLA7Q6ZV29 1317 aa30.15■■■□□ 2.42
USF2-204ENST00000593708 SMG6Q86US8 1419 aaKnown RBP30.14■■■□□ 2.42
USF2-204ENST00000593708 CARD14Q9BXL6 1004 aa30.14■■■□□ 2.42
USF2-204ENST00000593708 INSRP06213 1382 aa30.14■■■□□ 2.41
USF2-204ENST00000593708 FLT4P35916 1363 aa30.13■■■□□ 2.41
USF2-204ENST00000593708 MAP3K5Q99683 1374 aa30.12■■■□□ 2.41
USF2-204ENST00000593708 ANKRD26Q9UPS8 1709 aa30.11■■■□□ 2.41
USF2-204ENST00000593708 NSD3Q9BZ95 1437 aa30.11■■■□□ 2.41
USF2-204ENST00000593708 TOGARAM1Q9Y4F4 1720 aa30.1■■■□□ 2.41
USF2-204ENST00000593708 CHD4Q14839 1912 aa30.1■■■□□ 2.41
USF2-204ENST00000593708 CDCA8Q53HL2 280 aa30.1■■■□□ 2.41
USF2-204ENST00000593708 CGNL1Q0VF96 1302 aa30.1■■■□□ 2.41
USF2-204ENST00000593708 RAPGEF4Q8WZA2 1011 aa30.09■■■□□ 2.41
USF2-204ENST00000593708 KIF24Q5T7B8 1368 aa30.08■■■□□ 2.41
USF2-204ENST00000593708 PKD1L3Q7Z443 1732 aa30.08■■■□□ 2.41
USF2-204ENST00000593708 TFCP2L1Q9NZI6 479 aa30.07■■■□□ 2.4
USF2-204ENST00000593708 EMILIN1Q9Y6C2 1016 aa30.07■■■□□ 2.4
USF2-204ENST00000593708 CCNL1Q9UK58 526 aaPredicted RBP30.06■■■□□ 2.4
USF2-204ENST00000593708 C5P01031 1676 aa30.06■■■□□ 2.4
USF2-204ENST00000593708 SLC16A10Q8TF71 515 aa30.05■■■□□ 2.4
USF2-204ENST00000593708 ITGB4P16144 1822 aa30.05■■■□□ 2.4
USF2-204ENST00000593708 TAF1LQ8IZX4 1826 aa30.04■■■□□ 2.4
USF2-204ENST00000593708 TATP17735 454 aaPredicted RBP30.04■■■□□ 2.4
USF2-204ENST00000593708 NCAPD2Q15021 1401 aa30.03■■■□□ 2.4
USF2-204ENST00000593708 MAP2P11137 1827 aaKnown RBP30.03■■■□□ 2.4
USF2-204ENST00000593708 PCDH11XQ9BZA7 1347 aa30.02■■■□□ 2.4
USF2-204ENST00000593708 PCDH11YQ9BZA8 1340 aa30.02■■■□□ 2.4
USF2-204ENST00000593708 CYP27B1O15528 508 aa30.01■■■□□ 2.39
USF2-204ENST00000593708 POLD1P28340 1107 aa29.98■■■□□ 2.39
USF2-204ENST00000593708 ZNF784Q8NCA9 323 aaPredicted RBP29.98■■■□□ 2.39
USF2-204ENST00000593708 KLHL34Q8N239 644 aa29.97■■■□□ 2.39
USF2-204ENST00000593708 COL23A1Q86Y22 540 aaPredicted RBP29.96■■■□□ 2.39
USF2-204ENST00000593708 TIMELESSQ9UNS1 1208 aa29.96■■■□□ 2.39
USF2-204ENST00000593708 PALLDQ8WX93 1383 aa29.95■■■□□ 2.39
USF2-204ENST00000593708 PPM1GO15355 546 aaPredicted RBP29.95■■■□□ 2.39
USF2-204ENST00000593708 MPRIPQ6WCQ1 1025 aa29.94■■■□□ 2.38
USF2-204ENST00000593708 NLGN2Q8NFZ4 835 aa29.94■■■□□ 2.38
USF2-204ENST00000593708 C4BP0C0L5 1744 aa29.92■■■□□ 2.38
USF2-204ENST00000593708 WASHC2AQ641Q2 1341 aa29.92■■■□□ 2.38
USF2-204ENST00000593708 GPR162Q16538 588 aa29.9■■■□□ 2.38
USF2-204ENST00000593708 CLSPNQ9HAW4 1339 aa29.9■■■□□ 2.38
USF2-204ENST00000593708 UBR3Q6ZT12 1888 aa29.89■■■□□ 2.38
USF2-204ENST00000593708 MSH5O43196 834 aa29.89■■■□□ 2.38
USF2-204ENST00000593708 MSL1Q68DK7 614 aa29.89■■■□□ 2.38
USF2-204ENST00000593708 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
USF2-204ENST00000593708 EYA1Q99502 592 aa29.88■■■□□ 2.37
USF2-204ENST00000593708 POLKQ9UBT6 870 aa29.88■■■□□ 2.37
USF2-204ENST00000593708 NKX1-1Q15270 411 aaPredicted RBP29.87■■■□□ 2.37
USF2-204ENST00000593708 AMIGO3Q86WK7 504 aa29.87■■■□□ 2.37
USF2-204ENST00000593708 PIGBQ92521 554 aa29.86■■■□□ 2.37
USF2-204ENST00000593708 POLR3GLQ9BT43 218 aa29.86■■■□□ 2.37
USF2-204ENST00000593708 PELP1Q8IZL8 1130 aaKnown RBP29.84■■■□□ 2.37
USF2-204ENST00000593708 SPG7Q9UQ90 795 aa29.83■■■□□ 2.37
USF2-204ENST00000593708 TNNT2P45379 298 aaPredicted RBP29.82■■■□□ 2.36
USF2-204ENST00000593708 SMIM5Q71RC9 77 aa29.81■■■□□ 2.36
USF2-204ENST00000593708 SMARCC1Q92922 1105 aaPredicted RBP29.81■■■□□ 2.36
USF2-204ENST00000593708 YBX3P16989 372 aaKnown RBP eCLIP29.8■■■□□ 2.36
USF2-204ENST00000593708 EIF4A2Q14240 407 aaKnown RBP29.8■■■□□ 2.36
USF2-204ENST00000593708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.79■■■□□ 2.36
USF2-204ENST00000593708 HSPA5P11021 654 aaKnown RBP29.77■■■□□ 2.36
USF2-204ENST00000593708 PHKG2P15735 406 aa29.77■■■□□ 2.36
USF2-204ENST00000593708 LINC00116Q8NCU8 138 aa29.76■■■□□ 2.35
USF2-204ENST00000593708 FLAD1Q8NFF5 587 aa29.76■■■□□ 2.35
USF2-204ENST00000593708 AK7Q96M32 723 aa29.76■■■□□ 2.35
USF2-204ENST00000593708 ASAP1Q9ULH1 1129 aa29.76■■■□□ 2.35
USF2-204ENST00000593708 LOC102724428A0A0B4J2F2 783 aa29.75■■■□□ 2.35
USF2-204ENST00000593708 SIK1P57059 783 aa29.75■■■□□ 2.35
USF2-204ENST00000593708 TMOD3Q9NYL9 352 aa29.75■■■□□ 2.35
USF2-204ENST00000593708 PHF14O94880 888 aa29.74■■■□□ 2.35
USF2-204ENST00000593708 EIF4G2P78344 907 aaKnown RBP eCLIP29.73■■■□□ 2.35
USF2-204ENST00000593708 ITPK1Q13572 414 aa29.73■■■□□ 2.35
USF2-204ENST00000593708 IFNL2Q8IZJ0 200 aa29.73■■■□□ 2.35
USF2-204ENST00000593708 PANK3Q9H999 370 aa29.73■■■□□ 2.35
USF2-204ENST00000593708 IGSF1Q8N6C5 1336 aa29.72■■■□□ 2.35
USF2-204ENST00000593708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.72■■■□□ 2.35
USF2-204ENST00000593708 HMGB2P26583 209 aaKnown RBP29.71■■■□□ 2.35
USF2-204ENST00000593708 PLEKHG2Q9H7P9 1386 aa29.7■■■□□ 2.35
USF2-204ENST00000593708 CD2APQ9Y5K6 639 aa29.7■■■□□ 2.35
USF2-204ENST00000593708 ATG3Q9NT62 314 aa29.69■■■□□ 2.34
USF2-204ENST00000593708 KDRP35968 1356 aa29.68■■■□□ 2.34
USF2-204ENST00000593708 CEP350Q5VT06 3117 aa29.68■■■□□ 2.34
USF2-204ENST00000593708 SSFA2P28290 1259 aa29.67■■■□□ 2.34
USF2-204ENST00000593708 COL5A3P25940 1745 aaPredicted RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms