RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 FLT4P35916 1363 aa22.32■■□□□ 1.16
CIRBP-241ENST00000593048 CGNL1Q0VF96 1302 aa22.31■■□□□ 1.16
CIRBP-241ENST00000593048 TATP17735 454 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-241ENST00000593048 KIF24Q5T7B8 1368 aa22.3■■□□□ 1.16
CIRBP-241ENST00000593048 KIF20BQ96Q89 1820 aa22.3■■□□□ 1.16
CIRBP-241ENST00000593048 PRIM1P49642 420 aaKnown RBP22.3■■□□□ 1.16
CIRBP-241ENST00000593048 KAT6BQ8WYB5 2073 aa22.29■■□□□ 1.16
CIRBP-241ENST00000593048 HSPA5P11021 654 aaKnown RBP22.29■■□□□ 1.16
CIRBP-241ENST00000593048 ATF5Q9Y2D1 282 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-241ENST00000593048 EMILIN1Q9Y6C2 1016 aa22.29■■□□□ 1.16
CIRBP-241ENST00000593048 MEGF6O75095 1541 aa22.29■■□□□ 1.16
CIRBP-241ENST00000593048 MYOM1P52179 1685 aa22.27■■□□□ 1.16
CIRBP-241ENST00000593048 DCAF8L1A6NGE4 600 aa22.27■■□□□ 1.16
CIRBP-241ENST00000593048 RGPD2P0DJD1 1756 aa22.26■■□□□ 1.15
CIRBP-241ENST00000593048 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
CIRBP-241ENST00000593048 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
CIRBP-241ENST00000593048 BTAF1O14981 1849 aa22.26■■□□□ 1.15
CIRBP-241ENST00000593048 LRRC4BQ9NT99 713 aa22.25■■□□□ 1.15
CIRBP-241ENST00000593048 PTGER2P43116 358 aa22.23■■□□□ 1.15
CIRBP-241ENST00000593048 MTFR1LQ9H019 292 aa22.23■■□□□ 1.15
CIRBP-241ENST00000593048 PCDH11XQ9BZA7 1347 aa22.23■■□□□ 1.15
CIRBP-241ENST00000593048 PCDH11YQ9BZA8 1340 aa22.23■■□□□ 1.15
CIRBP-241ENST00000593048 TNNT2P45379 298 aaPredicted RBP22.22■■□□□ 1.15
CIRBP-241ENST00000593048 ZNF827Q17R98 1081 aa22.22■■□□□ 1.15
CIRBP-241ENST00000593048 PANK3Q9H999 370 aa22.21■■□□□ 1.15
CIRBP-241ENST00000593048 WASHC2AQ641Q2 1341 aa22.21■■□□□ 1.15
CIRBP-241ENST00000593048 PAPPAQ13219 1627 aa22.2■■□□□ 1.15
CIRBP-241ENST00000593048 KCNQ4P56696 695 aa22.2■■□□□ 1.14
CIRBP-241ENST00000593048 TFCP2L1Q9NZI6 479 aa22.19■■□□□ 1.14
CIRBP-241ENST00000593048 POLKQ9UBT6 870 aa22.19■■□□□ 1.14
CIRBP-241ENST00000593048 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
CIRBP-241ENST00000593048 DOT1LQ8TEK3 1739 aa22.18■■□□□ 1.14
CIRBP-241ENST00000593048 NSD2O96028 1365 aa22.18■■□□□ 1.14
CIRBP-241ENST00000593048 AKT1S1Q96B36 256 aa22.18■■□□□ 1.14
CIRBP-241ENST00000593048 SPG7Q9UQ90 795 aa22.17■■□□□ 1.14
CIRBP-241ENST00000593048 UTRNP46939 3433 aa22.16■■□□□ 1.14
CIRBP-241ENST00000593048 MPRIPQ6WCQ1 1025 aa22.16■■□□□ 1.14
CIRBP-241ENST00000593048 EYA1Q99502 592 aa22.16■■□□□ 1.14
CIRBP-241ENST00000593048 SGIP1Q9BQI5 828 aa22.16■■□□□ 1.14
CIRBP-241ENST00000593048 SHANK3Q9BYB0 1731 aa22.16■■□□□ 1.14
CIRBP-241ENST00000593048 CYP27B1O15528 508 aa22.15■■□□□ 1.14
CIRBP-241ENST00000593048 SLC16A10Q8TF71 515 aa22.14■■□□□ 1.13
CIRBP-241ENST00000593048 ARXQ96QS3 562 aa22.14■■□□□ 1.13
CIRBP-241ENST00000593048 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
CIRBP-241ENST00000593048 HMGB2P26583 209 aaKnown RBP22.12■■□□□ 1.13
CIRBP-241ENST00000593048 SYT17Q9BSW7 474 aa22.12■■□□□ 1.13
CIRBP-241ENST00000593048 CHD4Q14839 1912 aa22.12■■□□□ 1.13
CIRBP-241ENST00000593048 PNPLA7Q6ZV29 1317 aa22.11■■□□□ 1.13
CIRBP-241ENST00000593048 MSH5O43196 834 aa22.11■■□□□ 1.13
CIRBP-241ENST00000593048 POLD1P28340 1107 aa22.11■■□□□ 1.13
CIRBP-241ENST00000593048 EIF4A2Q14240 407 aaKnown RBP22.11■■□□□ 1.13
CIRBP-241ENST00000593048 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
CIRBP-241ENST00000593048 KNSTRNQ9Y448 316 aa22.11■■□□□ 1.13
CIRBP-241ENST00000593048 MAP2P11137 1827 aaKnown RBP22.1■■□□□ 1.13
CIRBP-241ENST00000593048 NCAPD2Q15021 1401 aa22.09■■□□□ 1.13
CIRBP-241ENST00000593048 SMARCC1Q92922 1105 aaPredicted RBP22.09■■□□□ 1.13
CIRBP-241ENST00000593048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.09■■□□□ 1.134e-13■□□□□ 8.8
CIRBP-241ENST00000593048 NKX1-1Q15270 411 aaPredicted RBP22.08■■□□□ 1.13
CIRBP-241ENST00000593048 IFNL2Q8IZJ0 200 aa22.08■■□□□ 1.13
CIRBP-241ENST00000593048 PALLDQ8WX93 1383 aa22.08■■□□□ 1.12
CIRBP-241ENST00000593048 QSER1Q2KHR3 1735 aa22.08■■□□□ 1.12
CIRBP-241ENST00000593048 ANKRD26Q9UPS8 1709 aa22.08■■□□□ 1.12
CIRBP-241ENST00000593048 LY75O60449 1722 aa22.07■■□□□ 1.12
CIRBP-241ENST00000593048 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
CIRBP-241ENST00000593048 COL24A1Q17RW2 1714 aa22.06■■□□□ 1.12
CIRBP-241ENST00000593048 PIGBQ92521 554 aa22.06■■□□□ 1.12
CIRBP-241ENST00000593048 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
CIRBP-241ENST00000593048 ZNF784Q8NCA9 323 aaPredicted RBP22.05■■□□□ 1.12
CIRBP-241ENST00000593048 TMOD3Q9NYL9 352 aa22.05■■□□□ 1.12
CIRBP-241ENST00000593048 PHKG2P15735 406 aa22.04■■□□□ 1.12
CIRBP-241ENST00000593048 PKD1L3Q7Z443 1732 aa22.03■■□□□ 1.12
CIRBP-241ENST00000593048 COL23A1Q86Y22 540 aaPredicted RBP22.03■■□□□ 1.12
CIRBP-241ENST00000593048 TUBGCP6Q96RT7 1819 aa22.02■■□□□ 1.12
CIRBP-241ENST00000593048 KIF7Q2M1P5 1343 aa22.02■■□□□ 1.12
CIRBP-241ENST00000593048 IGSF1Q8N6C5 1336 aa22.02■■□□□ 1.12
CIRBP-241ENST00000593048 PLEKHO1Q53GL0 409 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-241ENST00000593048 FLAD1Q8NFF5 587 aa22.01■■□□□ 1.11
CIRBP-241ENST00000593048 AK7Q96M32 723 aa22.01■■□□□ 1.11
CIRBP-241ENST00000593048 TOGARAM1Q9Y4F4 1720 aa21.98■■□□□ 1.11
CIRBP-241ENST00000593048 LOC102724428A0A0B4J2F2 783 aa21.98■■□□□ 1.11
CIRBP-241ENST00000593048 HSP90AB1P08238 724 aaKnown RBP21.98■■□□□ 1.11
CIRBP-241ENST00000593048 SIK1P57059 783 aa21.98■■□□□ 1.11
CIRBP-241ENST00000593048 AMOTQ4VCS5 1084 aa21.98■■□□□ 1.11
CIRBP-241ENST00000593048 MSL1Q68DK7 614 aa21.98■■□□□ 1.11
CIRBP-241ENST00000593048 ASAP1Q9ULH1 1129 aa21.98■■□□□ 1.11
CIRBP-241ENST00000593048 GPR162Q16538 588 aa21.97■■□□□ 1.11
CIRBP-241ENST00000593048 PLEKHG2Q9H7P9 1386 aa21.97■■□□□ 1.11
CIRBP-241ENST00000593048 AMER1Q5JTC6 1135 aaPredicted RBP21.96■■□□□ 1.11
CIRBP-241ENST00000593048 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
CIRBP-241ENST00000593048 ITGB4P16144 1822 aa21.96■■□□□ 1.11
CIRBP-241ENST00000593048 C5P01031 1676 aa21.95■■□□□ 1.1
CIRBP-241ENST00000593048 PHF14O94880 888 aa21.95■■□□□ 1.1
CIRBP-241ENST00000593048 ATP6V1AP38606 617 aa21.95■■□□□ 1.1
CIRBP-241ENST00000593048 SULT6B1Q6IMI4 303 aa21.95■■□□□ 1.1
CIRBP-241ENST00000593048 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
CIRBP-241ENST00000593048 DCAF5Q96JK2 942 aa21.95■■□□□ 1.1
CIRBP-241ENST00000593048 ERVV-2B6SEH9 535 aa21.94■■□□□ 1.1
CIRBP-241ENST00000593048 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
CIRBP-241ENST00000593048 AEBP1Q8IUX7 1158 aa21.94■■□□□ 1.1
CIRBP-241ENST00000593048 ATG3Q9NT62 314 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms