RNA–Protein interactions for RNA: ENST00000592843.1

AC004221.1-201, humanhuman

TSL 5 BASIC

Gene AC004221.1, Length 844 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004221.1-201ENST00000592843 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
AC004221.1-201ENST00000592843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
AC004221.1-201ENST00000592843 CCNL1Q9UK58 526 aaPredicted RBP12.45□□□□□ -0.42
AC004221.1-201ENST00000592843 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
AC004221.1-201ENST00000592843 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
AC004221.1-201ENST00000592843 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
AC004221.1-201ENST00000592843 FAM208AQ9UK61 1670 aaKnown RBP12.43□□□□□ -0.42
AC004221.1-201ENST00000592843 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
AC004221.1-201ENST00000592843 APLP1P51693 650 aa12.42□□□□□ -0.42
AC004221.1-201ENST00000592843 NME9Q86XW9 330 aa12.42□□□□□ -0.42
AC004221.1-201ENST00000592843 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
AC004221.1-201ENST00000592843 NSD2O96028 1365 aa12.42□□□□□ -0.42
AC004221.1-201ENST00000592843 C5P01031 1676 aa12.42□□□□□ -0.42
AC004221.1-201ENST00000592843 KIF3CO14782 793 aa12.41□□□□□ -0.42
AC004221.1-201ENST00000592843 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
AC004221.1-201ENST00000592843 SIN3AQ96ST3 1273 aa12.41□□□□□ -0.42
AC004221.1-201ENST00000592843 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
AC004221.1-201ENST00000592843 USP47Q96K76 1375 aa12.4□□□□□ -0.42
AC004221.1-201ENST00000592843 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
AC004221.1-201ENST00000592843 TAF1LQ8IZX4 1826 aa12.39□□□□□ -0.43
AC004221.1-201ENST00000592843 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
AC004221.1-201ENST00000592843 FLAD1Q8NFF5 587 aa12.38□□□□□ -0.43
AC004221.1-201ENST00000592843 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
AC004221.1-201ENST00000592843 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
AC004221.1-201ENST00000592843 IP6K1Q92551 441 aa12.37□□□□□ -0.43
AC004221.1-201ENST00000592843 TONSLQ96HA7 1378 aa12.37□□□□□ -0.43
AC004221.1-201ENST00000592843 SBNO2Q9Y2G9 1366 aa12.37□□□□□ -0.43
AC004221.1-201ENST00000592843 CAPN15O75808 1086 aa12.36□□□□□ -0.43
AC004221.1-201ENST00000592843 CD163L1Q9NR16 1453 aa12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 ROCK2O75116 1388 aaKnown RBP12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 WDR90Q96KV7 1748 aa12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 TOMM70O94826 608 aa12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 TMC1Q8TDI8 760 aa12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 MEGF6O75095 1541 aa12.35□□□□□ -0.43
AC004221.1-201ENST00000592843 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
AC004221.1-201ENST00000592843 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
AC004221.1-201ENST00000592843 UBR3Q6ZT12 1888 aa12.34□□□□□ -0.43
AC004221.1-201ENST00000592843 CICQ96RK0 1608 aaPredicted RBP12.33□□□□□ -0.43
AC004221.1-201ENST00000592843 PHF14O94880 888 aa12.33□□□□□ -0.44
AC004221.1-201ENST00000592843 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
AC004221.1-201ENST00000592843 COL13A1Q5TAT6 717 aaPredicted RBP12.33□□□□□ -0.44
AC004221.1-201ENST00000592843 AK7Q96M32 723 aa12.33□□□□□ -0.44
AC004221.1-201ENST00000592843 TOGARAM1Q9Y4F4 1720 aa12.33□□□□□ -0.44
AC004221.1-201ENST00000592843 PCNTO95613 3336 aa12.32□□□□□ -0.44
AC004221.1-201ENST00000592843 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
AC004221.1-201ENST00000592843 L3MBTL2Q969R5 705 aa12.32□□□□□ -0.44
AC004221.1-201ENST00000592843 HOXC9P31274 260 aa12.31□□□□□ -0.44
AC004221.1-201ENST00000592843 AMPHP49418 695 aa12.31□□□□□ -0.44
AC004221.1-201ENST00000592843 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
AC004221.1-201ENST00000592843 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
AC004221.1-201ENST00000592843 MAP3K19Q56UN5 1328 aa12.31□□□□□ -0.44
AC004221.1-201ENST00000592843 ITGB4P16144 1822 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 NSD3Q9BZ95 1437 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 AMIGO3Q86WK7 504 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 TNS4Q8IZW8 715 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 KLRG1Q96E93 195 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 NMRK2Q9NPI5 230 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
AC004221.1-201ENST00000592843 HTRA3P83110 453 aa12.29□□□□□ -0.44
AC004221.1-201ENST00000592843 C16orf71Q8IYS4 520 aaPredicted RBP12.29□□□□□ -0.44
AC004221.1-201ENST00000592843 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
AC004221.1-201ENST00000592843 RAPGEF4Q8WZA2 1011 aa12.29□□□□□ -0.44
AC004221.1-201ENST00000592843 CGNL1Q0VF96 1302 aa12.29□□□□□ -0.44
AC004221.1-201ENST00000592843 NBPF6Q5VWK0 638 aa12.28□□□□□ -0.44
AC004221.1-201ENST00000592843 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
AC004221.1-201ENST00000592843 SMARCC1Q92922 1105 aaPredicted RBP12.28□□□□□ -0.44
AC004221.1-201ENST00000592843 COG3Q96JB2 828 aa12.28□□□□□ -0.44
AC004221.1-201ENST00000592843 NBPF4Q96M43 638 aa12.28□□□□□ -0.44
AC004221.1-201ENST00000592843 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
AC004221.1-201ENST00000592843 KIF13BQ9NQT8 1826 aa12.27□□□□□ -0.44
AC004221.1-201ENST00000592843 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 FBLN1P23142 703 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 SSFA2P28290 1259 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 PRELPP51888 382 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 ARHGAP27Q6ZUM4 889 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 JMYQ8N9B5 988 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 KIAA1551Q9HCM1 1747 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.45
AC004221.1-201ENST00000592843 SMG6Q86US8 1419 aaKnown RBP12.26□□□□□ -0.45
AC004221.1-201ENST00000592843 MMP10P09238 476 aa12.25□□□□□ -0.45
AC004221.1-201ENST00000592843 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
AC004221.1-201ENST00000592843 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
AC004221.1-201ENST00000592843 A0A0G2JLW4 131 aa12.24□□□□□ -0.45
AC004221.1-201ENST00000592843 GNPATO15228 680 aa12.24□□□□□ -0.45
AC004221.1-201ENST00000592843 TGFB2P61812 414 aa12.24□□□□□ -0.45
AC004221.1-201ENST00000592843 FSTL1Q12841 308 aa12.24□□□□□ -0.45
AC004221.1-201ENST00000592843 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
AC004221.1-201ENST00000592843 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
AC004221.1-201ENST00000592843 FCHSD2O94868 740 aa12.23□□□□□ -0.45
AC004221.1-201ENST00000592843 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
AC004221.1-201ENST00000592843 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
AC004221.1-201ENST00000592843 LINC00116Q8NCU8 138 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 347.7 ms