RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 HOXC9P31274 260 aa21.01■□□□□ 0.95
SF3A2-206ENST00000592314 SLC27A3Q5K4L6 730 aa21.01■□□□□ 0.95
SF3A2-206ENST00000592314 C5P01031 1676 aa21■□□□□ 0.95
SF3A2-206ENST00000592314 PRIM1P49642 420 aaKnown RBP21■□□□□ 0.95
SF3A2-206ENST00000592314 NLGN2Q8NFZ4 835 aa21■□□□□ 0.95
SF3A2-206ENST00000592314 TAF1LQ8IZX4 1826 aa20.99■□□□□ 0.95
SF3A2-206ENST00000592314 TOGARAM1Q9Y4F4 1720 aa20.99■□□□□ 0.95
SF3A2-206ENST00000592314 SYTL4Q96C24 671 aaPredicted RBP20.99■□□□□ 0.95
SF3A2-206ENST00000592314 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
SF3A2-206ENST00000592314 SLC16A10Q8TF71 515 aa20.98■□□□□ 0.95
SF3A2-206ENST00000592314 PUS7Q96PZ0 661 aaKnown RBP20.98■□□□□ 0.95
SF3A2-206ENST00000592314 C1QTNF8P60827 252 aa20.97■□□□□ 0.95
SF3A2-206ENST00000592314 GPR162Q16538 588 aa20.97■□□□□ 0.95
SF3A2-206ENST00000592314 TFCP2L1Q9NZI6 479 aa20.97■□□□□ 0.95
SF3A2-206ENST00000592314 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
SF3A2-206ENST00000592314 SENP3-EIF4A1A0A087X0R7 540 aa20.95■□□□□ 0.94
SF3A2-206ENST00000592314 USHBP1Q8N6Y0 703 aa20.95■□□□□ 0.94
SF3A2-206ENST00000592314 COG3Q96JB2 828 aa20.95■□□□□ 0.94
SF3A2-206ENST00000592314 RTL1A6NKG5 1358 aa20.95■□□□□ 0.94
SF3A2-206ENST00000592314 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
SF3A2-206ENST00000592314 ST20-MTHFSA0A0A6YYL1 179 aa20.94■□□□□ 0.94
SF3A2-206ENST00000592314 POLD1P28340 1107 aa20.94■□□□□ 0.94
SF3A2-206ENST00000592314 RRS1Q15050 365 aaKnown RBP20.94■□□□□ 0.94
SF3A2-206ENST00000592314 ZCRB1Q8TBF4 217 aaKnown RBP20.94■□□□□ 0.94
SF3A2-206ENST00000592314 ITGB4P16144 1822 aa20.94■□□□□ 0.94
SF3A2-206ENST00000592314 AMPHP49418 695 aa20.93■□□□□ 0.94
SF3A2-206ENST00000592314 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
SF3A2-206ENST00000592314 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
SF3A2-206ENST00000592314 YBX3P16989 372 aaKnown RBP eCLIP20.92■□□□□ 0.946e-10■■□□□ 12.3
SF3A2-206ENST00000592314 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
SF3A2-206ENST00000592314 CCNL1Q9UK58 526 aaPredicted RBP20.92■□□□□ 0.94
SF3A2-206ENST00000592314 COL23A1Q86Y22 540 aaPredicted RBP20.91■□□□□ 0.94
SF3A2-206ENST00000592314 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
SF3A2-206ENST00000592314 USP47Q96K76 1375 aa20.89■□□□□ 0.93
SF3A2-206ENST00000592314 MSL1Q68DK7 614 aa20.89■□□□□ 0.93
SF3A2-206ENST00000592314 UBR3Q6ZT12 1888 aa20.89■□□□□ 0.93
SF3A2-206ENST00000592314 C4BP0C0L5 1744 aa20.88■□□□□ 0.93
SF3A2-206ENST00000592314 FYB1O15117 783 aa20.88■□□□□ 0.93
SF3A2-206ENST00000592314 GGNBP2Q9H3C7 697 aa20.88■□□□□ 0.93
SF3A2-206ENST00000592314 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
SF3A2-206ENST00000592314 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
SF3A2-206ENST00000592314 AMIGO3Q86WK7 504 aa20.86■□□□□ 0.93
SF3A2-206ENST00000592314 GIGYF1O75420 1035 aaPredicted RBP20.85■□□□□ 0.93
SF3A2-206ENST00000592314 INSRP06213 1382 aa20.85■□□□□ 0.93
SF3A2-206ENST00000592314 HSP90AB2PQ58FF8 381 aa20.84■□□□□ 0.93
SF3A2-206ENST00000592314 SMG6Q86US8 1419 aaKnown RBP20.84■□□□□ 0.93
SF3A2-206ENST00000592314 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
SF3A2-206ENST00000592314 CGNL1Q0VF96 1302 aa20.83■□□□□ 0.93
SF3A2-206ENST00000592314 MSH5O43196 834 aa20.83■□□□□ 0.93
SF3A2-206ENST00000592314 NCAPD2Q15021 1401 aa20.82■□□□□ 0.92
SF3A2-206ENST00000592314 CYP27B1O15528 508 aa20.82■□□□□ 0.92
SF3A2-206ENST00000592314 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
SF3A2-206ENST00000592314 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
SF3A2-206ENST00000592314 SMIM5Q71RC9 77 aa20.81■□□□□ 0.92
SF3A2-206ENST00000592314 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
SF3A2-206ENST00000592314 FLT4P35916 1363 aa20.81■□□□□ 0.92
SF3A2-206ENST00000592314 ATP10DQ9P241 1426 aa20.8■□□□□ 0.92
SF3A2-206ENST00000592314 TATP17735 454 aaPredicted RBP20.8■□□□□ 0.92
SF3A2-206ENST00000592314 ADCY9O60503 1353 aa20.78■□□□□ 0.92
SF3A2-206ENST00000592314 MPRIPQ6WCQ1 1025 aa20.78■□□□□ 0.92
SF3A2-206ENST00000592314 EMILIN1Q9Y6C2 1016 aa20.78■□□□□ 0.92
SF3A2-206ENST00000592314 KIF24Q5T7B8 1368 aa20.76■□□□□ 0.91
SF3A2-206ENST00000592314 GRIN3BO60391 1043 aa20.76■□□□□ 0.91
SF3A2-206ENST00000592314 CARD14Q9BXL6 1004 aa20.76■□□□□ 0.91
SF3A2-206ENST00000592314 KIAA1551Q9HCM1 1747 aa20.75■□□□□ 0.91
SF3A2-206ENST00000592314 CD2APQ9Y5K6 639 aa20.75■□□□□ 0.91
SF3A2-206ENST00000592314 NSD3Q9BZ95 1437 aa20.75■□□□□ 0.91
SF3A2-206ENST00000592314 TMF1P82094 1093 aa20.74■□□□□ 0.91
SF3A2-206ENST00000592314 PIGBQ92521 554 aa20.74■□□□□ 0.91
SF3A2-206ENST00000592314 KIF13BQ9NQT8 1826 aa20.71■□□□□ 0.91
SF3A2-206ENST00000592314 SLC24A1O60721 1099 aa20.71■□□□□ 0.91
SF3A2-206ENST00000592314 PHF14O94880 888 aa20.71■□□□□ 0.91
SF3A2-206ENST00000592314 LINC00116Q8NCU8 138 aa20.71■□□□□ 0.91
SF3A2-206ENST00000592314 FLAD1Q8NFF5 587 aa20.71■□□□□ 0.91
SF3A2-206ENST00000592314 WWC3Q9ULE0 1092 aa20.71■□□□□ 0.91
SF3A2-206ENST00000592314 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
SF3A2-206ENST00000592314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.7■□□□□ 0.9
SF3A2-206ENST00000592314 AK7Q96M32 723 aa20.7■□□□□ 0.9
SF3A2-206ENST00000592314 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
SF3A2-206ENST00000592314 NKX1-1Q15270 411 aaPredicted RBP20.69■□□□□ 0.9
SF3A2-206ENST00000592314 IGSF1Q8N6C5 1336 aa20.69■□□□□ 0.9
SF3A2-206ENST00000592314 N4BP2Q86UW6 1770 aaPredicted RBP20.68■□□□□ 0.9
SF3A2-206ENST00000592314 ITPK1Q13572 414 aa20.68■□□□□ 0.9
SF3A2-206ENST00000592314 SMARCC1Q92922 1105 aaPredicted RBP20.68■□□□□ 0.9
SF3A2-206ENST00000592314 COL5A3P25940 1745 aaPredicted RBP20.67■□□□□ 0.9
SF3A2-206ENST00000592314 LOC102724428A0A0B4J2F2 783 aa20.66■□□□□ 0.9
SF3A2-206ENST00000592314 SIK1P57059 783 aa20.66■□□□□ 0.9
SF3A2-206ENST00000592314 ZNF526Q8TF50 670 aaPredicted RBP20.66■□□□□ 0.9
SF3A2-206ENST00000592314 ASAP1Q9ULH1 1129 aa20.66■□□□□ 0.9
SF3A2-206ENST00000592314 EYA1Q99502 592 aa20.65■□□□□ 0.9
SF3A2-206ENST00000592314 KDRP35968 1356 aa20.64■□□□□ 0.89
SF3A2-206ENST00000592314 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
SF3A2-206ENST00000592314 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
SF3A2-206ENST00000592314 SSFA2P28290 1259 aa20.64■□□□□ 0.89
SF3A2-206ENST00000592314 GPBP1L1Q9HC44 474 aaPredicted RBP20.64■□□□□ 0.89
SF3A2-206ENST00000592314 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.89
SF3A2-206ENST00000592314 C4AP0C0L4 1744 aa20.64■□□□□ 0.89
SF3A2-206ENST00000592314 ZNF831Q5JPB2 1677 aa20.64■□□□□ 0.89
SF3A2-206ENST00000592314 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
SF3A2-206ENST00000592314 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms