RNA–Protein interactions for RNA: ENST00000592133.5

RANBP3-225, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-225ENST00000592133 DNAJC5GQ8N7S2 189 aa17.45■□□□□ 0.38
RANBP3-225ENST00000592133 FLAD1Q8NFF5 587 aa17.43■□□□□ 0.38
RANBP3-225ENST00000592133 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
RANBP3-225ENST00000592133 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
RANBP3-225ENST00000592133 USP47Q96K76 1375 aa17.42■□□□□ 0.38
RANBP3-225ENST00000592133 TOMM70O94826 608 aa17.42■□□□□ 0.38
RANBP3-225ENST00000592133 COL13A1Q5TAT6 717 aaPredicted RBP17.42■□□□□ 0.38
RANBP3-225ENST00000592133 NME9Q86XW9 330 aa17.42■□□□□ 0.38
RANBP3-225ENST00000592133 USP31Q70CQ4 1352 aa17.41■□□□□ 0.38
RANBP3-225ENST00000592133 NSD2O96028 1365 aa17.4■□□□□ 0.38
RANBP3-225ENST00000592133 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
RANBP3-225ENST00000592133 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
RANBP3-225ENST00000592133 LY75O60449 1722 aa17.38■□□□□ 0.37
RANBP3-225ENST00000592133 TNS4Q8IZW8 715 aa17.37■□□□□ 0.37
RANBP3-225ENST00000592133 IP6K1Q92551 441 aa17.37■□□□□ 0.37
RANBP3-225ENST00000592133 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
RANBP3-225ENST00000592133 LTN1O94822 1766 aa17.35■□□□□ 0.37
RANBP3-225ENST00000592133 PHF14O94880 888 aa17.34■□□□□ 0.37
RANBP3-225ENST00000592133 PRELPP51888 382 aa17.34■□□□□ 0.37
RANBP3-225ENST00000592133 HDGFL2Q7Z4V5 671 aaPredicted RBP17.34■□□□□ 0.37
RANBP3-225ENST00000592133 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
RANBP3-225ENST00000592133 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
RANBP3-225ENST00000592133 AK7Q96M32 723 aa17.34■□□□□ 0.37
RANBP3-225ENST00000592133 HTRA3P83110 453 aa17.33■□□□□ 0.36
RANBP3-225ENST00000592133 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
RANBP3-225ENST00000592133 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
RANBP3-225ENST00000592133 SBNO2Q9Y2G9 1366 aa17.32■□□□□ 0.36
RANBP3-225ENST00000592133 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
RANBP3-225ENST00000592133 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
RANBP3-225ENST00000592133 AMPHP49418 695 aa17.3■□□□□ 0.36
RANBP3-225ENST00000592133 RBM46Q8TBY0 533 aaKnown RBP17.3■□□□□ 0.36
RANBP3-225ENST00000592133 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
RANBP3-225ENST00000592133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
RANBP3-225ENST00000592133 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
RANBP3-225ENST00000592133 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
RANBP3-225ENST00000592133 SMIM5Q71RC9 77 aa17.29■□□□□ 0.36
RANBP3-225ENST00000592133 BCS1LQ9Y276 419 aa17.29■□□□□ 0.36
RANBP3-225ENST00000592133 C5P01031 1676 aa17.29■□□□□ 0.36
RANBP3-225ENST00000592133 AMIGO3Q86WK7 504 aa17.28■□□□□ 0.36
RANBP3-225ENST00000592133 USP54Q70EL1 1684 aa17.28■□□□□ 0.36
RANBP3-225ENST00000592133 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
RANBP3-225ENST00000592133 MEGF6O75095 1541 aa17.27■□□□□ 0.36
RANBP3-225ENST00000592133 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
RANBP3-225ENST00000592133 HOXC9P31274 260 aa17.27■□□□□ 0.36
RANBP3-225ENST00000592133 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
RANBP3-225ENST00000592133 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
RANBP3-225ENST00000592133 FSTL1Q12841 308 aa17.26■□□□□ 0.35
RANBP3-225ENST00000592133 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
RANBP3-225ENST00000592133 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
RANBP3-225ENST00000592133 TERF2IPQ9NYB0 399 aa17.26■□□□□ 0.35
RANBP3-225ENST00000592133 EDC4Q6P2E9 1401 aaKnown RBP17.26■□□□□ 0.35
RANBP3-225ENST00000592133 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
RANBP3-225ENST00000592133 WDR90Q96KV7 1748 aa17.26■□□□□ 0.35
RANBP3-225ENST00000592133 CD163L1Q9NR16 1453 aa17.25■□□□□ 0.35
RANBP3-225ENST00000592133 CGNL1Q0VF96 1302 aa17.25■□□□□ 0.35
RANBP3-225ENST00000592133 MAP3K19Q56UN5 1328 aa17.25■□□□□ 0.35
RANBP3-225ENST00000592133 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
RANBP3-225ENST00000592133 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
RANBP3-225ENST00000592133 SSFA2P28290 1259 aa17.24■□□□□ 0.35
RANBP3-225ENST00000592133 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
RANBP3-225ENST00000592133 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
RANBP3-225ENST00000592133 CICQ96RK0 1608 aaPredicted RBP17.24■□□□□ 0.35
RANBP3-225ENST00000592133 A0A0G2JLW4 131 aa17.23■□□□□ 0.35
RANBP3-225ENST00000592133 TGFB2P61812 414 aa17.23■□□□□ 0.35
RANBP3-225ENST00000592133 COG3Q96JB2 828 aa17.23■□□□□ 0.35
RANBP3-225ENST00000592133 C4BP0C0L5 1744 aa17.23■□□□□ 0.35
RANBP3-225ENST00000592133 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
RANBP3-225ENST00000592133 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
RANBP3-225ENST00000592133 FCHSD2O94868 740 aa17.22■□□□□ 0.35
RANBP3-225ENST00000592133 MMP10P09238 476 aa17.22■□□□□ 0.35
RANBP3-225ENST00000592133 FBLN1P23142 703 aa17.22■□□□□ 0.35
RANBP3-225ENST00000592133 PXDNLA1KZ92 1463 aa17.21■□□□□ 0.35
RANBP3-225ENST00000592133 C9orf131Q5VYM1 1079 aa17.21■□□□□ 0.35
RANBP3-225ENST00000592133 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.34
RANBP3-225ENST00000592133 A0A1W2PP64 1363 aa17.2■□□□□ 0.34
RANBP3-225ENST00000592133 GNPATO15228 680 aa17.2■□□□□ 0.34
RANBP3-225ENST00000592133 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
RANBP3-225ENST00000592133 LINC00116Q8NCU8 138 aa17.19■□□□□ 0.34
RANBP3-225ENST00000592133 RRAGCQ9HB90 399 aa17.19■□□□□ 0.34
RANBP3-225ENST00000592133 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
RANBP3-225ENST00000592133 SIK1P57059 783 aa17.18■□□□□ 0.34
RANBP3-225ENST00000592133 PIGBQ92521 554 aa17.18■□□□□ 0.34
RANBP3-225ENST00000592133 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
RANBP3-225ENST00000592133 HSPA1AP0DMV8 641 aaKnown RBP17.17■□□□□ 0.34
RANBP3-225ENST00000592133 HSPA1BP0DMV9 641 aaKnown RBP17.17■□□□□ 0.34
RANBP3-225ENST00000592133 DPEP1P16444 411 aa17.17■□□□□ 0.34
RANBP3-225ENST00000592133 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
RANBP3-225ENST00000592133 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
RANBP3-225ENST00000592133 RGPD2P0DJD1 1756 aa17.17■□□□□ 0.34
RANBP3-225ENST00000592133 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
RANBP3-225ENST00000592133 CYP27B1O15528 508 aa17.16■□□□□ 0.34
RANBP3-225ENST00000592133 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
RANBP3-225ENST00000592133 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
RANBP3-225ENST00000592133 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
RANBP3-225ENST00000592133 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
RANBP3-225ENST00000592133 TMF1P82094 1093 aa17.15■□□□□ 0.34
RANBP3-225ENST00000592133 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
RANBP3-225ENST00000592133 KCPQ6ZWJ8 1503 aa17.15■□□□□ 0.34
RANBP3-225ENST00000592133 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
RANBP3-225ENST00000592133 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms