RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 MORC1Q86VD1 984 aa37.28■■■■□ 3.56
SMAD4-213ENST00000591914 PER1O15534 1290 aaPredicted RBP37.27■■■■□ 3.56
SMAD4-213ENST00000591914 ZCRB1Q8TBF4 217 aaKnown RBP37.27■■■■□ 3.56
SMAD4-213ENST00000591914 DDX54Q8TDD1 881 aaKnown RBP37.27■■■■□ 3.56
SMAD4-213ENST00000591914 RAPGEF4Q8WZA2 1011 aa37.27■■■■□ 3.56
SMAD4-213ENST00000591914 KCNQ2O43526 872 aa37.26■■■■□ 3.56
SMAD4-213ENST00000591914 ACSBG1Q96GR2 724 aa37.23■■■■□ 3.55
SMAD4-213ENST00000591914 TATP17735 454 aaPredicted RBP37.22■■■■□ 3.55
SMAD4-213ENST00000591914 PSDA5PKW4 1024 aaPredicted RBP37.21■■■■□ 3.55
SMAD4-213ENST00000591914 EYA1Q99502 592 aa37.2■■■■□ 3.55
SMAD4-213ENST00000591914 EIF4A2Q14240 407 aaKnown RBP37.19■■■■□ 3.54
SMAD4-213ENST00000591914 R3HDM1Q15032 1099 aaKnown RBP37.18■■■■□ 3.54
SMAD4-213ENST00000591914 BTAF1O14981 1849 aa37.17■■■■□ 3.54
SMAD4-213ENST00000591914 PROM2Q8N271 834 aa37.15■■■■□ 3.54
SMAD4-213ENST00000591914 PKD1L3Q7Z443 1732 aa37.15■■■■□ 3.54
SMAD4-213ENST00000591914 DOT1LQ8TEK3 1739 aa37.14■■■■□ 3.54
SMAD4-213ENST00000591914 NBPF14Q5TI25 921 aa37.13■■■■□ 3.53
SMAD4-213ENST00000591914 NPC1L1Q9UHC9 1359 aa37.13■■■■□ 3.53
SMAD4-213ENST00000591914 KAT6BQ8WYB5 2073 aa37.13■■■■□ 3.53
SMAD4-213ENST00000591914 PCDH11XQ9BZA7 1347 aa37.12■■■■□ 3.53
SMAD4-213ENST00000591914 PCDH11YQ9BZA8 1340 aa37.12■■■■□ 3.53
SMAD4-213ENST00000591914 IGSF1Q8N6C5 1336 aa37.1■■■■□ 3.53
SMAD4-213ENST00000591914 TXNRD1Q16881 649 aa37.09■■■■□ 3.53
SMAD4-213ENST00000591914 CC2D1BQ5T0F9 858 aaKnown RBP37.08■■■■□ 3.53
SMAD4-213ENST00000591914 CYP27B1O15528 508 aa37.06■■■■□ 3.52
SMAD4-213ENST00000591914 PRIM1P49642 420 aaKnown RBP37.06■■■■□ 3.52
SMAD4-213ENST00000591914 LRP5O75197 1615 aa37.05■■■■□ 3.52
SMAD4-213ENST00000591914 PLEKHG2Q9H7P9 1386 aa37.04■■■■□ 3.52
SMAD4-213ENST00000591914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.04■■■■□ 3.521e-7■□□□□ 11.2
SMAD4-213ENST00000591914 SYTL4Q96C24 671 aaPredicted RBP37.03■■■■□ 3.52
SMAD4-213ENST00000591914 SPG7Q9UQ90 795 aa37.03■■■■□ 3.52
SMAD4-213ENST00000591914 ANO8Q9HCE9 1232 aaPredicted RBP37.02■■■■□ 3.52
SMAD4-213ENST00000591914 MTHFSP49914 203 aa37■■■■□ 3.51
SMAD4-213ENST00000591914 IL13P35225 146 aa36.97■■■■□ 3.51
SMAD4-213ENST00000591914 TOGARAM1Q9Y4F4 1720 aa36.96■■■■□ 3.51
SMAD4-213ENST00000591914 NKX1-1Q15270 411 aaPredicted RBP36.96■■■■□ 3.51
SMAD4-213ENST00000591914 PAPPAQ13219 1627 aa36.96■■■■□ 3.51
SMAD4-213ENST00000591914 LY75O60449 1722 aa36.92■■■■□ 3.5
SMAD4-213ENST00000591914 KDRP35968 1356 aa36.91■■■■□ 3.5
SMAD4-213ENST00000591914 SLC27A3Q5K4L6 730 aa36.91■■■■□ 3.5
SMAD4-213ENST00000591914 AEBP1Q8IUX7 1158 aa36.91■■■■□ 3.5
SMAD4-213ENST00000591914 LRRC4BQ9NT99 713 aa36.91■■■■□ 3.5
SMAD4-213ENST00000591914 PHKG2P15735 406 aa36.9■■■■□ 3.5
SMAD4-213ENST00000591914 CNGB1Q14028 1251 aaPredicted RBP36.9■■■■□ 3.5
SMAD4-213ENST00000591914 STK32BQ9NY57 414 aa36.9■■■■□ 3.5
SMAD4-213ENST00000591914 ITGB4P16144 1822 aa36.89■■■■□ 3.5
SMAD4-213ENST00000591914 SLC15A2Q16348 729 aa36.89■■■■□ 3.5
SMAD4-213ENST00000591914 IFNL2Q8IZJ0 200 aa36.89■■■■□ 3.5
SMAD4-213ENST00000591914 SULT6B1Q6IMI4 303 aa36.88■■■■□ 3.49
SMAD4-213ENST00000591914 CASZ1Q86V15 1759 aa36.88■■■■□ 3.49
SMAD4-213ENST00000591914 PLEKHO1Q53GL0 409 aaPredicted RBP36.85■■■■□ 3.49
SMAD4-213ENST00000591914 MPRIPQ6WCQ1 1025 aa36.85■■■■□ 3.49
SMAD4-213ENST00000591914 COL3A1P02461 1466 aaPredicted RBP36.84■■■■□ 3.49
SMAD4-213ENST00000591914 AMOTQ4VCS5 1084 aa36.84■■■■□ 3.49
SMAD4-213ENST00000591914 DIAPH1O60610 1272 aaKnown RBP36.82■■■■□ 3.48
SMAD4-213ENST00000591914 PDGFDQ9GZP0 370 aaPredicted RBP36.8■■■■□ 3.48
SMAD4-213ENST00000591914 PIGBQ92521 554 aa36.79■■■■□ 3.48
SMAD4-213ENST00000591914 KCNQ4P56696 695 aa36.78■■■■□ 3.48
SMAD4-213ENST00000591914 ZNF827Q17R98 1081 aa36.78■■■■□ 3.48
SMAD4-213ENST00000591914 ZNF530Q6P9A1 599 aaPredicted RBP36.78■■■■□ 3.48
SMAD4-213ENST00000591914 CCNL1Q9UK58 526 aaPredicted RBP36.78■■■■□ 3.48
SMAD4-213ENST00000591914 PALLDQ8WX93 1383 aa36.78■■■■□ 3.48
SMAD4-213ENST00000591914 AKT1S1Q96B36 256 aa36.77■■■■□ 3.48
SMAD4-213ENST00000591914 HSP90AB1P08238 724 aaKnown RBP36.75■■■■□ 3.47
SMAD4-213ENST00000591914 SPON1Q9HCB6 807 aa36.75■■■■□ 3.47
SMAD4-213ENST00000591914 SMARCC1Q92922 1105 aaPredicted RBP36.74■■■■□ 3.47
SMAD4-213ENST00000591914 DCAF5Q96JK2 942 aa36.74■■■■□ 3.47
SMAD4-213ENST00000591914 TMOD3Q9NYL9 352 aa36.74■■■■□ 3.47
SMAD4-213ENST00000591914 HMOX1P09601 288 aa36.73■■■■□ 3.47
SMAD4-213ENST00000591914 KDM6AO15550 1401 aaPredicted RBP36.72■■■■□ 3.47
SMAD4-213ENST00000591914 QSER1Q2KHR3 1735 aa36.72■■■■□ 3.47
SMAD4-213ENST00000591914 PPP2R1AP30153 589 aa36.71■■■■□ 3.47
SMAD4-213ENST00000591914 ERVV-2B6SEH9 535 aa36.7■■■■□ 3.47
SMAD4-213ENST00000591914 C1orf141Q5JVX7 400 aa36.7■■■■□ 3.47
SMAD4-213ENST00000591914 C5P01031 1676 aa36.69■■■■□ 3.46
SMAD4-213ENST00000591914 TUBGCP6Q96RT7 1819 aa36.67■■■■□ 3.46
SMAD4-213ENST00000591914 CFAP53Q96M91 514 aa36.67■■■■□ 3.46
SMAD4-213ENST00000591914 TAF1LQ8IZX4 1826 aa36.66■■■■□ 3.46
SMAD4-213ENST00000591914 ZBTB7AO95365 584 aa36.66■■■■□ 3.46
SMAD4-213ENST00000591914 ASAP1Q9ULH1 1129 aa36.65■■■■□ 3.46
SMAD4-213ENST00000591914 U2SURPO15042 1029 aaKnown RBP36.64■■■■□ 3.46
SMAD4-213ENST00000591914 HMGB2P26583 209 aaKnown RBP36.63■■■■□ 3.45
SMAD4-213ENST00000591914 TFCP2L1Q9NZI6 479 aa36.63■■■■□ 3.45
SMAD4-213ENST00000591914 PNPLA7Q6ZV29 1317 aa36.62■■■■□ 3.45
SMAD4-213ENST00000591914 AKAP4Q5JQC9 854 aa36.62■■■■□ 3.45
SMAD4-213ENST00000591914 MTFR1LQ9H019 292 aa36.62■■■■□ 3.45
SMAD4-213ENST00000591914 ATG3Q9NT62 314 aa36.62■■■■□ 3.45
SMAD4-213ENST00000591914 SCN11AQ9UI33 1791 aa36.61■■■■□ 3.45
SMAD4-213ENST00000591914 LOC102724428A0A0B4J2F2 783 aa36.6■■■■□ 3.45
SMAD4-213ENST00000591914 SIK1P57059 783 aa36.6■■■■□ 3.45
SMAD4-213ENST00000591914 PTGER2P43116 358 aa36.59■■■■□ 3.45
SMAD4-213ENST00000591914 CABP4P57796 275 aa36.59■■■■□ 3.45
SMAD4-213ENST00000591914 ATF5Q9Y2D1 282 aaPredicted RBP36.59■■■■□ 3.45
SMAD4-213ENST00000591914 MTHFSDQ2M296 383 aaKnown RBP36.58■■■■□ 3.45
SMAD4-213ENST00000591914 C4BP0C0L5 1744 aa36.57■■■■□ 3.45
SMAD4-213ENST00000591914 ZEB1P37275 1124 aaPredicted RBP36.56■■■■□ 3.44
SMAD4-213ENST00000591914 PPP1R1BQ9UD71 204 aaPredicted RBP36.56■■■■□ 3.44
SMAD4-213ENST00000591914 SLC16A10Q8TF71 515 aa36.55■■■■□ 3.44
SMAD4-213ENST00000591914 SGIP1Q9BQI5 828 aa36.54■■■■□ 3.44
SMAD4-213ENST00000591914 NUDCQ9Y266 331 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms