RNA–Protein interactions for RNA: ENST00000591762.1

SPHK1-209, Transcript of sphingosine kinase 1, humanhuman

TSL 2

Gene SPHK1, Length 2,502 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-209ENST00000591762 SETD1BQ9UPS6 1966 aaKnown RBP22.28■■□□□ 1.16
SPHK1-209ENST00000591762 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
SPHK1-209ENST00000591762 ZNF142P52746 1687 aaPredicted RBP22.28■■□□□ 1.16
SPHK1-209ENST00000591762 NPHP4O75161 1426 aaPredicted RBP22.27■■□□□ 1.16
SPHK1-209ENST00000591762 ZNF428Q96B54 188 aa22.27■■□□□ 1.16
SPHK1-209ENST00000591762 EIF5BO60841 1220 aaKnown RBP22.27■■□□□ 1.16
SPHK1-209ENST00000591762 PSME1Q06323 249 aa22.27■■□□□ 1.16
SPHK1-209ENST00000591762 HOXC9P31274 260 aa22.26■■□□□ 1.15
SPHK1-209ENST00000591762 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
SPHK1-209ENST00000591762 DNAJC5Q9H3Z4 198 aa22.26■■□□□ 1.15
SPHK1-209ENST00000591762 ARXQ96QS3 562 aa22.25■■□□□ 1.15
SPHK1-209ENST00000591762 ARHGEF10O15013 1369 aa22.25■■□□□ 1.15
SPHK1-209ENST00000591762 XPCQ01831 940 aaPredicted RBP22.25■■□□□ 1.15
SPHK1-209ENST00000591762 MFAP1P55081 439 aaKnown RBP22.24■■□□□ 1.15
SPHK1-209ENST00000591762 ORAI2Q96SN7 254 aa22.24■■□□□ 1.15
SPHK1-209ENST00000591762 ZBTB40Q9NUA8 1239 aa22.24■■□□□ 1.15
SPHK1-209ENST00000591762 ZBTB7CA1YPR0 619 aa22.24■■□□□ 1.15
SPHK1-209ENST00000591762 RGPD1P0DJD0 1748 aa22.24■■□□□ 1.15
SPHK1-209ENST00000591762 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
SPHK1-209ENST00000591762 IGSF1Q8N6C5 1336 aa22.22■■□□□ 1.15
SPHK1-209ENST00000591762 CHL1O00533 1208 aa22.22■■□□□ 1.15
SPHK1-209ENST00000591762 ADGRL3Q9HAR2 1447 aa22.21■■□□□ 1.15
SPHK1-209ENST00000591762 RTF1Q92541 710 aaKnown RBP22.21■■□□□ 1.15
SPHK1-209ENST00000591762 USHBP1Q8N6Y0 703 aa22.2■■□□□ 1.14
SPHK1-209ENST00000591762 C22orf23Q9BZE7 217 aa22.2■■□□□ 1.14
SPHK1-209ENST00000591762 KDRP35968 1356 aa22.19■■□□□ 1.14
SPHK1-209ENST00000591762 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
SPHK1-209ENST00000591762 FAM43AQ8N2R8 423 aa22.19■■□□□ 1.14
SPHK1-209ENST00000591762 C1orf115Q9H7X2 142 aa22.19■■□□□ 1.14
SPHK1-209ENST00000591762 LMOD2Q6P5Q4 547 aa22.18■■□□□ 1.14
SPHK1-209ENST00000591762 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
SPHK1-209ENST00000591762 HDAC1Q13547 482 aaPredicted RBP22.18■■□□□ 1.14
SPHK1-209ENST00000591762 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
SPHK1-209ENST00000591762 ZBTB7BO15156 539 aaPredicted RBP22.17■■□□□ 1.14
SPHK1-209ENST00000591762 GZF1Q9H116 711 aaPredicted RBP22.17■■□□□ 1.14
SPHK1-209ENST00000591762 CRB1P82279 1406 aa22.16■■□□□ 1.14
SPHK1-209ENST00000591762 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
SPHK1-209ENST00000591762 TSPYL4Q9UJ04 414 aa22.15■■□□□ 1.14
SPHK1-209ENST00000591762 L1TD1Q5T7N2 865 aaKnown RBP22.14■■□□□ 1.13
SPHK1-209ENST00000591762 MCM4P33991 863 aa22.13■■□□□ 1.13
SPHK1-209ENST00000591762 ABCC4O15439 1325 aa22.13■■□□□ 1.13
SPHK1-209ENST00000591762 API5Q9BZZ5 524 aaKnown RBP22.12■■□□□ 1.13
SPHK1-209ENST00000591762 IP6K1Q92551 441 aa22.12■■□□□ 1.13
SPHK1-209ENST00000591762 KIF24Q5T7B8 1368 aa22.11■■□□□ 1.13
SPHK1-209ENST00000591762 GNAT3A8MTJ3 354 aa22.11■■□□□ 1.13
SPHK1-209ENST00000591762 SMC5Q8IY18 1101 aa22.11■■□□□ 1.13
SPHK1-209ENST00000591762 NBPF6Q5VWK0 638 aa22.1■■□□□ 1.13
SPHK1-209ENST00000591762 NBPF4Q96M43 638 aa22.1■■□□□ 1.13
SPHK1-209ENST00000591762 CHMP5Q9NZZ3 219 aa22.1■■□□□ 1.13
SPHK1-209ENST00000591762 SLC4A2P04920 1241 aa22.09■■□□□ 1.13
SPHK1-209ENST00000591762 NWD1Q149M9 1564 aa22.09■■□□□ 1.13
SPHK1-209ENST00000591762 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
SPHK1-209ENST00000591762 KCNH5Q8NCM2 988 aa22.08■■□□□ 1.13
SPHK1-209ENST00000591762 IL17REQ8NFR9 667 aa22.08■■□□□ 1.13
SPHK1-209ENST00000591762 LRRC59Q96AG4 307 aaKnown RBP22.08■■□□□ 1.13
SPHK1-209ENST00000591762 LNPKQ9C0E8 428 aa22.08■■□□□ 1.13
SPHK1-209ENST00000591762 GOLGA6L3A6NEY3 463 aa22.08■■□□□ 1.12
SPHK1-209ENST00000591762 GCP02774 474 aa22.08■■□□□ 1.12
SPHK1-209ENST00000591762 HSCBQ8IWL3 235 aa22.08■■□□□ 1.12
SPHK1-209ENST00000591762 XRCC6P12956 609 aaKnown RBP eCLIP22.07■■□□□ 1.12
SPHK1-209ENST00000591762 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
SPHK1-209ENST00000591762 KRT28Q7Z3Y7 464 aa22.07■■□□□ 1.12
SPHK1-209ENST00000591762 RRAGDQ9NQL2 400 aaPredicted RBP22.07■■□□□ 1.12
SPHK1-209ENST00000591762 C19orf44Q9H6X5 657 aa22.06■■□□□ 1.12
SPHK1-209ENST00000591762 SIRT2Q8IXJ6 389 aa22.06■■□□□ 1.12
SPHK1-209ENST00000591762 NECTIN2Q92692 538 aa22.06■■□□□ 1.12
SPHK1-209ENST00000591762 LTN1O94822 1766 aa22.05■■□□□ 1.12
SPHK1-209ENST00000591762 HSPA2P54652 639 aa22.05■■□□□ 1.12
SPHK1-209ENST00000591762 DDX17Q92841 729 aaKnown RBP22.05■■□□□ 1.12
SPHK1-209ENST00000591762 CHMP4BQ9H444 224 aaKnown RBP22.05■■□□□ 1.12
SPHK1-209ENST00000591762 USP54Q70EL1 1684 aa22.05■■□□□ 1.12
SPHK1-209ENST00000591762 NFAT5O94916 1531 aa22.05■■□□□ 1.12
SPHK1-209ENST00000591762 RTL1A6NKG5 1358 aa22.05■■□□□ 1.12
SPHK1-209ENST00000591762 TRAK2O60296 914 aa22.05■■□□□ 1.12
SPHK1-209ENST00000591762 PANK2Q9BZ23 570 aa22.05■■□□□ 1.12
SPHK1-209ENST00000591762 HTATSF1O43719 755 aaKnown RBP22.04■■□□□ 1.12
SPHK1-209ENST00000591762 G2E3Q7L622 706 aa22.04■■□□□ 1.12
SPHK1-209ENST00000591762 NUCB1Q02818 461 aa22.04■■□□□ 1.12
SPHK1-209ENST00000591762 PKNOX2Q96KN3 472 aa22.04■■□□□ 1.12
SPHK1-209ENST00000591762 MAP3K5Q99683 1374 aa22.03■■□□□ 1.12
SPHK1-209ENST00000591762 ANKRD45Q5TZF3 282 aa22.03■■□□□ 1.12
SPHK1-209ENST00000591762 MSH6P52701 1360 aa22.02■■□□□ 1.12
SPHK1-209ENST00000591762 FSD2A1L4K1 749 aa22.02■■□□□ 1.11
SPHK1-209ENST00000591762 INTS3Q68E01 1043 aaKnown RBP22.02■■□□□ 1.11
SPHK1-209ENST00000591762 RGS12O14924 1447 aa22.01■■□□□ 1.11
SPHK1-209ENST00000591762 ARHGEF25Q86VW2 580 aa22.01■■□□□ 1.11
SPHK1-209ENST00000591762 CHD1LQ86WJ1 897 aa22.01■■□□□ 1.11
SPHK1-209ENST00000591762 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
SPHK1-209ENST00000591762 F6X3S4 739 aa22.01■■□□□ 1.11
SPHK1-209ENST00000591762 ATF3P18847 181 aa22■■□□□ 1.11
SPHK1-209ENST00000591762 TAF7Q15545 349 aaPredicted RBP22■■□□□ 1.11
SPHK1-209ENST00000591762 SLC4A10Q6U841 1118 aa22■■□□□ 1.11
SPHK1-209ENST00000591762 LGR6Q9HBX8 967 aa22■■□□□ 1.11
SPHK1-209ENST00000591762 AXIN2Q9Y2T1 843 aa22■■□□□ 1.11
SPHK1-209ENST00000591762 TMEM94Q12767 1356 aa21.99■■□□□ 1.11
SPHK1-209ENST00000591762 PTPRCP08575 1304 aa21.99■■□□□ 1.11
SPHK1-209ENST00000591762 ZC3H6P61129 1189 aaKnown RBP21.99■■□□□ 1.11
SPHK1-209ENST00000591762 ANKRD24Q8TF21 1146 aa21.97■■□□□ 1.11
SPHK1-209ENST00000591762 GCC1Q96CN9 775 aa21.97■■□□□ 1.11
SPHK1-209ENST00000591762 RBM25P49756 843 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms