RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 RSPH6AQ9H0K4 717 aa23.08■■□□□ 1.28
AP3D1-211ENST00000591650 TNS2Q63HR2 1409 aa23.07■■□□□ 1.28
AP3D1-211ENST00000591650 SEPT12Q8IYM1 358 aa23.07■■□□□ 1.28
AP3D1-211ENST00000591650 PNISRQ8TF01 805 aaKnown RBP23.07■■□□□ 1.28
AP3D1-211ENST00000591650 RAPGEF4Q8WZA2 1011 aa23.06■■□□□ 1.28
AP3D1-211ENST00000591650 PRKAR2BP31323 418 aa23.04■■□□□ 1.28
AP3D1-211ENST00000591650 ADAMTS8Q9UP79 889 aa23.04■■□□□ 1.28
AP3D1-211ENST00000591650 TATP17735 454 aaPredicted RBP23.03■■□□□ 1.28
AP3D1-211ENST00000591650 DLG5Q8TDM6 1919 aa23.03■■□□□ 1.28
AP3D1-211ENST00000591650 PLEKHG2Q9H7P9 1386 aa23.02■■□□□ 1.28
AP3D1-211ENST00000591650 VIRMAQ69YN4 1812 aaKnown RBP23.02■■□□□ 1.28
AP3D1-211ENST00000591650 A0A0G2JS52 829 aa23.02■■□□□ 1.28
AP3D1-211ENST00000591650 MYT1Q01538 1121 aa23.02■■□□□ 1.28
AP3D1-211ENST00000591650 CDCA7Q9BWT1 371 aaPredicted RBP23.02■■□□□ 1.28
AP3D1-211ENST00000591650 FCHSD2O94868 740 aa23.01■■□□□ 1.27
AP3D1-211ENST00000591650 CCDC146Q8IYE0 955 aa22.99■■□□□ 1.27
AP3D1-211ENST00000591650 FAM9BQ8IZU0 186 aa22.99■■□□□ 1.27
AP3D1-211ENST00000591650 SOCS7O14512 581 aa22.99■■□□□ 1.27
AP3D1-211ENST00000591650 PLEKHF1Q96S99 279 aa22.99■■□□□ 1.27
AP3D1-211ENST00000591650 TOGARAM1Q9Y4F4 1720 aa22.98■■□□□ 1.27
AP3D1-211ENST00000591650 DDB1Q16531 1140 aa22.98■■□□□ 1.27
AP3D1-211ENST00000591650 PHACTR3Q96KR7 559 aa22.98■■□□□ 1.27
AP3D1-211ENST00000591650 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
AP3D1-211ENST00000591650 ZCRB1Q8TBF4 217 aaKnown RBP22.96■■□□□ 1.27
AP3D1-211ENST00000591650 PCDH11XQ9BZA7 1347 aa22.94■■□□□ 1.26
AP3D1-211ENST00000591650 PCDH11YQ9BZA8 1340 aa22.94■■□□□ 1.26
AP3D1-211ENST00000591650 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
AP3D1-211ENST00000591650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.26
AP3D1-211ENST00000591650 MAPK8IP3Q9UPT6 1336 aa22.94■■□□□ 1.26
AP3D1-211ENST00000591650 EXOC5O00471 708 aa22.93■■□□□ 1.26
AP3D1-211ENST00000591650 MTHFSDQ2M296 383 aaKnown RBP22.93■■□□□ 1.26
AP3D1-211ENST00000591650 PLEKHO1Q53GL0 409 aaPredicted RBP22.93■■□□□ 1.26
AP3D1-211ENST00000591650 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
AP3D1-211ENST00000591650 SPG7Q9UQ90 795 aa22.93■■□□□ 1.26
AP3D1-211ENST00000591650 ADAMTS7Q9UKP4 1686 aa22.93■■□□□ 1.26
AP3D1-211ENST00000591650 SCN11AQ9UI33 1791 aa22.93■■□□□ 1.26
AP3D1-211ENST00000591650 CYP27B1O15528 508 aa22.92■■□□□ 1.26
AP3D1-211ENST00000591650 AMOTQ4VCS5 1084 aa22.92■■□□□ 1.26
AP3D1-211ENST00000591650 FAM182BQ5T319 152 aa22.92■■□□□ 1.26
AP3D1-211ENST00000591650 RUNDC1Q96C34 613 aa22.92■■□□□ 1.26
AP3D1-211ENST00000591650 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
AP3D1-211ENST00000591650 MARCH10Q8NA82 808 aaPredicted RBP22.91■■□□□ 1.26
AP3D1-211ENST00000591650 PNNQ9H307 717 aaKnown RBP22.91■■□□□ 1.26
AP3D1-211ENST00000591650 EP400Q96L91 3159 aa22.91■■□□□ 1.26
AP3D1-211ENST00000591650 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
AP3D1-211ENST00000591650 DDX54Q8TDD1 881 aaKnown RBP22.91■■□□□ 1.26
AP3D1-211ENST00000591650 KDM6AO15550 1401 aaPredicted RBP22.89■■□□□ 1.25
AP3D1-211ENST00000591650 PHKG2P15735 406 aa22.89■■□□□ 1.25
AP3D1-211ENST00000591650 GAS2L2Q8NHY3 880 aa22.89■■□□□ 1.25
AP3D1-211ENST00000591650 ITGB4P16144 1822 aa22.88■■□□□ 1.25
AP3D1-211ENST00000591650 MAP3K5Q99683 1374 aa22.88■■□□□ 1.25
AP3D1-211ENST00000591650 SENP3-EIF4A1A0A087X0R7 540 aa22.88■■□□□ 1.25
AP3D1-211ENST00000591650 NEFMP07197 916 aa22.88■■□□□ 1.25
AP3D1-211ENST00000591650 NHSQ6T4R5 1651 aa22.88■■□□□ 1.25
AP3D1-211ENST00000591650 NFE2L2Q16236 605 aa22.87■■□□□ 1.25
AP3D1-211ENST00000591650 RRP7AQ9Y3A4 280 aaKnown RBP22.87■■□□□ 1.25
AP3D1-211ENST00000591650 IFNL2Q8IZJ0 200 aa22.86■■□□□ 1.25
AP3D1-211ENST00000591650 SIPA1L3O60292 1781 aaPredicted RBP22.85■■□□□ 1.25
AP3D1-211ENST00000591650 APAF1O14727 1248 aa22.85■■□□□ 1.25
AP3D1-211ENST00000591650 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
AP3D1-211ENST00000591650 KAT6BQ8WYB5 2073 aa22.84■■□□□ 1.25
AP3D1-211ENST00000591650 TMPOP42166 694 aaKnown RBP22.84■■□□□ 1.25
AP3D1-211ENST00000591650 AKAP4Q5JQC9 854 aa22.84■■□□□ 1.25
AP3D1-211ENST00000591650 MRC1P22897 1456 aa22.84■■□□□ 1.25
AP3D1-211ENST00000591650 BCL9O00512 1426 aa22.83■■□□□ 1.25
AP3D1-211ENST00000591650 TNS1Q9HBL0 1735 aaKnown RBP22.82■■□□□ 1.24
AP3D1-211ENST00000591650 NKX1-1Q15270 411 aaPredicted RBP22.82■■□□□ 1.24
AP3D1-211ENST00000591650 GNAT3A8MTJ3 354 aa22.81■■□□□ 1.24
AP3D1-211ENST00000591650 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
AP3D1-211ENST00000591650 MPRIPQ6WCQ1 1025 aa22.81■■□□□ 1.24
AP3D1-211ENST00000591650 BTAF1O14981 1849 aa22.8■■□□□ 1.24
AP3D1-211ENST00000591650 RIPK4P57078 832 aa22.8■■□□□ 1.24
AP3D1-211ENST00000591650 FAM196AQ6ZSG2 479 aa22.8■■□□□ 1.24
AP3D1-211ENST00000591650 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
AP3D1-211ENST00000591650 PAPPAQ13219 1627 aa22.78■■□□□ 1.24
AP3D1-211ENST00000591650 HSP90AB1P08238 724 aaKnown RBP22.78■■□□□ 1.24
AP3D1-211ENST00000591650 DCTN1Q14203 1278 aa22.78■■□□□ 1.24
AP3D1-211ENST00000591650 DCAF5Q96JK2 942 aa22.78■■□□□ 1.24
AP3D1-211ENST00000591650 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
AP3D1-211ENST00000591650 MCM10Q7L590 875 aa22.77■■□□□ 1.24
AP3D1-211ENST00000591650 ACSBG1Q96GR2 724 aa22.77■■□□□ 1.24
AP3D1-211ENST00000591650 TRIM35Q9UPQ4 493 aa22.77■■□□□ 1.24
AP3D1-211ENST00000591650 RNMTO43148 476 aaKnown RBP22.76■■□□□ 1.23
AP3D1-211ENST00000591650 IL17REQ8NFR9 667 aa22.76■■□□□ 1.23
AP3D1-211ENST00000591650 THUMPD2Q9BTF0 503 aaKnown RBP22.76■■□□□ 1.23
AP3D1-211ENST00000591650 PTF1AQ7RTS3 328 aa22.75■■□□□ 1.23
AP3D1-211ENST00000591650 UPF1Q92900 1129 aaKnown RBP eCLIP22.75■■□□□ 1.233e-11■■■■■ 34.6
AP3D1-211ENST00000591650 KDM3BQ7LBC6 1761 aa22.74■■□□□ 1.23
AP3D1-211ENST00000591650 HTATSF1O43719 755 aaKnown RBP22.74■■□□□ 1.23
AP3D1-211ENST00000591650 TRIM37O94972 964 aa22.74■■□□□ 1.23
AP3D1-211ENST00000591650 LMOD3Q0VAK6 560 aa22.74■■□□□ 1.23
AP3D1-211ENST00000591650 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
AP3D1-211ENST00000591650 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
AP3D1-211ENST00000591650 KCNQ2O43526 872 aa22.73■■□□□ 1.23
AP3D1-211ENST00000591650 PRIM1P49642 420 aaKnown RBP22.71■■□□□ 1.23
AP3D1-211ENST00000591650 SYTL4Q96C24 671 aaPredicted RBP22.71■■□□□ 1.23
AP3D1-211ENST00000591650 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
AP3D1-211ENST00000591650 ERVV-2B6SEH9 535 aa22.7■■□□□ 1.22
AP3D1-211ENST00000591650 SLC52A2Q9HAB3 445 aa22.7■■□□□ 1.22
AP3D1-211ENST00000591650 HNRNPUQ00839 825 aaKnown RBP eCLIP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms